Anig003386.1
Basic Information
- Insect
- Anaulacaspis nigra
- Gene Symbol
- bab2
- Assembly
- GCA_030264675.1
- Location
- JARJDV010002618.1:764-6016[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-17 1.1e-13 50.5 0.0 1 42 359 401 359 404 0.95
Sequence Information
- Coding Sequence
- ATGTCAACGCAACAGTATTGTCTTCGATGGAACAACCATCAACCCAACTTCATATCTGTGTTCTCCAATCTCCTCAACAGTGAGTCACTTGTTGATGTTACCCTCTCAGCAGATGGAAGGCACCTGCAGGCGCACAAATTGGTGTTGTCTGCATGCAGCTCATATTTTCAGTCTTTGTTCACCATGAATCCATGCCAACATCCCATTGTTATACTAAAGGATGTGAAGTTTACTGATTTGAAAGTAATCATTGACTTTATGTACTATGGTGAGGTGAATGTATCACAGGATCAACTACCACACATTTTAAAAACAGCTGAAGCACTAAAGATAAAAGGTTTAGCTGAGATTCCTGTGGAAGCATCAGTAATGCAACAGTCCAATTCAATTGAGAATAAGACTGAATTGGTAGCAACAGATGCAAACTGGAATAACCCCGAAAATCAACGGCAGTCTATGTCTCCCTGTCCTTTGTCACCCTCAAGTAAAAGAAAACGATTGCGCAAAACTTCAACTGGATCTGGTTCTGGCTCAACTGAGAAATATGCAAGCGAAGAACAGTCATCAAATGAAGTCACACTAACATCTCCAGTGGGGATGGCAGTTATTAAATCTGATACAGGCGTAGTAACAACTGATGCACAAACCAAAAGTAGTTCTAAAGAAGTCAATACTTCATATGAAAGTATAGATTGCTCTGCACCCCAAATTACCTTGAAACTTCCTTCTGATGTACCAATGCAACAACATTCGGTTGAAAATACGGTTGATATGGCAGGATCCTCAACGGCAACGCATGCAGTCACAgGTTACCAATGGGGTATTGTCGATCAACACCACTATCCACATTTTACCCAAGCCACTCTAACACTTCCCCAAGAATTACAATATACCACCAGCCCACCCTCGTTAGTCCAAACCTATTCCAGCACCGGCAGCAGCGTCTGCACCGAGAGCGACGCCAACGCAATTGATGCGCGCACTCGCCCGCCGCTGGTAGCCACAACGCAAACGGTGGTCAACAATTCGCCGCAACAGGCGCCCGTCAAGCGCAAACGCAGCATTAATCCGCAGTCCGAGGATAATTTCTTGCGGGCGCTGGAGGCGGTGCGCTTTGGTGGCATAGGGTTTTGCAAAGCAGCGCGCATGTACGGCGTGAATAATCGCACACTGTGGCTCGAGTACAAAAAGCGCGGCTATCCAAACTATCGgcaaagtattaaaaatcGCAAAACCGATGCGGGATCCAGTTTGGCGATCAAAGTGGACGATAACagcccgccgccgcccgacCAGCCCATTGACTCACCCGAAAACGGTGGTTCACCGCCGCCGAACATACAACAGCACCAACCATCAACCACACCTCCACCCGCAACAATTCAACAGCATCCAATTACGAGTAATTCGGTGGCGATGATTAGCGGAGCATTTATTGATGGACGACCAGTTGAAATCGCCACGCCTGTCCTGCAGCGATCACATCGAGTTATAATTACAACGCATGCACAACTGTCTCAATCGTCGCAATATACGAATACAATGATGTTGGGATCGAAACGAAGTCGCATTCTGATGCGTCAGTCTCGGATAAAGAAAGATTGCGAACCGGGTGCACCTCCCGATGGCGACGCGCATTATTTATCCGTCCCGCATGTTAGAGTTGAACGACAAGTATCCGATCCGTTGCCCACAACGTCGCCGCCTCCAGGACCTCATTTAGCAGTACCCGGGAGTATTTTAGTCAAACAGCATTCACACCCCTTGTTGCCCAGTCAAATGACTTATCAGGCAGCAAGCCCACCGCCACTCTCGCAACTGCAGATAATCACCCATCATTCAACCGCGTCGGGATCAGTGGAGAATGAATTATATAGCCCAAATACAGATTATGCCGAAACTAAAGAATCAACAACACCGATTGTACGAGTGAAGTCCGAGGAATTGACGCAAGCACTACGTGTGAAATCTGAAGATTTAACTACAAGCACGCTAAAAGTACGCACGGATGAACTAAAACGCAGCGTATCGTCGCCTTCTCAAACGAACACGCGCTCTAGTCATTGCCCCGTTGTGCGGCCAGGACCTGCGTTGGGCTGCAACTATTGTTGGAATACGGTCGACAATCATGGCCGAATATTGCGCAGGAAGACCAAATACCATTGTCCCGAATGCCAAACGAATCTTTGCATTGTACCCTGCTTTCAAGAATACCATGAACGGCACGTACCCTCCTCCGACACGCTGTCGGTGCCGCCGACGATAAAGATTTTTCCGAAAACGGGTTCGATGTGA
- Protein Sequence
- MSTQQYCLRWNNHQPNFISVFSNLLNSESLVDVTLSADGRHLQAHKLVLSACSSYFQSLFTMNPCQHPIVILKDVKFTDLKVIIDFMYYGEVNVSQDQLPHILKTAEALKIKGLAEIPVEASVMQQSNSIENKTELVATDANWNNPENQRQSMSPCPLSPSSKRKRLRKTSTGSGSGSTEKYASEEQSSNEVTLTSPVGMAVIKSDTGVVTTDAQTKSSSKEVNTSYESIDCSAPQITLKLPSDVPMQQHSVENTVDMAGSSTATHAVTGYQWGIVDQHHYPHFTQATLTLPQELQYTTSPPSLVQTYSSTGSSVCTESDANAIDARTRPPLVATTQTVVNNSPQQAPVKRKRSINPQSEDNFLRALEAVRFGGIGFCKAARMYGVNNRTLWLEYKKRGYPNYRQSIKNRKTDAGSSLAIKVDDNSPPPPDQPIDSPENGGSPPPNIQQHQPSTTPPPATIQQHPITSNSVAMISGAFIDGRPVEIATPVLQRSHRVIITTHAQLSQSSQYTNTMMLGSKRSRILMRQSRIKKDCEPGAPPDGDAHYLSVPHVRVERQVSDPLPTTSPPPGPHLAVPGSILVKQHSHPLLPSQMTYQAASPPPLSQLQIITHHSTASGSVENELYSPNTDYAETKESTTPIVRVKSEELTQALRVKSEDLTTSTLKVRTDELKRSVSSPSQTNTRSSHCPVVRPGPALGCNYCWNTVDNHGRILRRKTKYHCPECQTNLCIVPCFQEYHERHVPSSDTLSVPPTIKIFPKTGSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00083996;
- 90% Identity
- iTF_00049363;
- 80% Identity
- iTF_00083996;