Anig005695.1
Basic Information
- Insect
- Anaulacaspis nigra
- Gene Symbol
- retn
- Assembly
- GCA_030264675.1
- Location
- JARJDV010004526.1:67088-120276[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-25 4.1e-22 78.2 0.0 2 89 219 304 218 304 0.96
Sequence Information
- Coding Sequence
- ATGCAACGCAATAATGCTGAAGCTGAACGAAGAAACGGTGTGTACGGTCGCGAGGCGCAGAGCGATTCTCAGGAAAGAGCATTGTTCAATATTGACTCAACATTTATAGAGAGTGCGCGTGCACTTTTCTGCAGGAGACAAGTCGGCAAGATTCGCGTCAAAAATCGAGAACCGGTGCCCATCTACGCCATGGAAACGGAGCAGCAGGAGCGAGAGAGTGATTTGGGCGAAGAGAGTCCAGTGTCAAATCATGACGAAGAACTCAGTGAAGGCGAGTCGACGGGTCACCATGAAGATATCGATAGCAGCGATGAACTTCGCCGCCACAATAGCCTTCTCGCTGACCACGGTGACGTGCTCGCTAAACTTAAGATGCAGGTGCGAGACATCAAGGTAGGGGAAGACTTTGACACATCTCGGCTGCAGTTCCCGATGAACAATCGCAGCGACGGCTTCCAGTTGCCGGTGCCGTTCCCGTTTCCACATCCGGCCGCCGCCTTCCTGCCGCCGATGGCCCCACAGCAGACGACGGCGCCGTCCAGTGGTAGCTCACATTCGTCCGAGGGCAGCAACGCCTCCTCGCAGCACACCTGGTCGTTTGAGGAGCAATTCAAACAGGTGCGTCAGTTGTACGAAATCAACGACGATCCCAAACGTAAAGAGTTCCTGGATGATATCTTTTCTTTTATGCAGAAAAGAGGCACCCCGATTAATCGACTGCCCATTATGGCGAAATCAGTATTAGATCTCTACGAATTGTACAATTTAGTGGTGGCACGCGGCGGTCTTGTGGATGTCATCAACAAGAAGCTTTGGCAGGAAATTATCAAGGGTTTGCATTTGCCCTCGTCTATTACATCAGCAGCATTCACACTTCGCACTCAatataTGAAATATCTCTACCCGTACGAGTGCGAGAAGAAAGGTTTTAGCACGCCTGCTGAATTACAAGCGGCGATTGATGGTAATCGACGCGAGGGCCGAAGAAGTAGCTACGGACAATACGAATCGGTACAACGGTCTCCAAATCCTTCGCAAATGTCACCTCTATCGTTTGTCTCACAGCAACAACAGTTGGCGGCGCGCATGAATTCGGTAATGAGTGGCGGCGGAGGTATTGGTATGCACAATGGAGCACACCATCCCAGTCATCCAACTCCCCTTGGACAGCCTCTTAGTGCTGGGCCACTTCCTGGTCTTGCGCCAAGCGAATTCGAAGCGCGCATGATGCAGTACGTTAAGCTACTGAACAAAGAAGTACGCAGTTCAGCATCGACACCACCACGTCATGGCGATCAGTCGCCCCCCAATGAGACATCACCTTTGAACCCCCTTGAGATGACACGCATGACGCTTTGGAATCTTTACAACAATAATCAGCCGCAGGTTGAACCGCAAAAAGAGGCGCTCAATCTTGCAGACGCGGCGCCAGTAATTGTTAAGCGAGAGCCTGAGCAGCGTgagtcgccgccgcccgccaaAAAGTTTGTCAAAGACGAGGACGATCGTCCGCAAAGTAAATCCATGTCGCCAAGTACAAACATCAAAATTAACAGTCGAGGCGATGCTCGAAATGGCGATAATTCATTAGTTATTGTGCATTGCTCAGAATGGAATTTAATATCACAGACACGCACCACATTTCTGGAAGTCTATAACAATTATATTGATGCAGTTGTGATGCATTTTGATATACCAGAGGACTCCATTGAGGCTATGTTTGAATTTAGAGGTAGTATGCCTTTATCCAAAGTGATATCATGCCCAACaaaagatattgaattgtaCCTGCAATATGGTGCTCCACCAGTGATCAATCCTGATGGCTCAGAGTTTCCAAaagattttcttttaaatagaAGAGAACATATTTTACGCATAAAGTTTGCAACAAATAAGGTTTATacacatataaatattagttcACCAATTCCTGGATCTTATTATGCTGCTGCTTTTCATCCATATGTAAATCCAAAGGATCAGGGAATAACCCAAGATGGTCTGGTCCCAGTTTGTGATAGTTTTATTGATGCATCTATATACGTAAAGCAATTAAACGTAACGCCAATTGTATCTGAGCAAAGTTTTACTGTGAATTTGAAGCCAAAGGaaacaaaactatttaaattctatattcccttaagtatttttaaagtGATAGTGGTTGCTAGTAATTTTAAACCATGCACCATTTGTGAAAAAGTGCTTGTTACACTTTATCCATCGACAACATTGTCTGGCAGTATCAATGCAACCATAGATGATACACATTTGAGTTCTTCATTTCGTGTACTGGGCGACGACGATTACTACATTAAGCTGATTTCAAATGTGACGACCAactcgaaattaattgatgacgAAACAACGTTTACCTTCTTAATCAAGTTTGTTGAAATACCTGACTATTTAATCGATGACGATAGGAGGGAAATGCCAGAACCCGTATTTTTGAATGCATCGCACATGTACTATACGCCTCCTACGCCTTCAGTAGCGtggaaatataatgaatacgACTTGCACAAAAGTCGTAACACGGAAAGTTTTCAGTTCACCTACGAACTGGAGCACTTGGAAGATGGTTTAATTCCCGTTGACATCAAAGTTAGTAGCGTGGGTTTCTCGGCCTTAAAATTCAATGTACGGGACGTACTCGATGTAGGCGGCACGTTAAGTATCGCCTTAGCGTTCTTTCCGCGCATTGAACGCAGCGGAGGCTGGATACACATTAAGAAGGAACCAGCCCATCATTCCCTTGTTGCCTGCTTGCGTCGTGCTGGAATTGAGGTACCAATTTGGAAAGACAACTGCATGTACCTAGATAATATTTCTCAGTCGCCCCTGGTGCTCAACAATTCAGTGTCAAACAGTTCATTTACAATCCCATACCCAGAGCCTGGTAATTGGTACTTGACGTTTAAGCTCTTCTGTGGCGAATGCAGGCCATGCAATTGTTCACAAGCCTGCAAAGATGCACTGTCCGAATGCATAAAGCAGTGCGAAGCTGAATGCGATTATGATTGTTTTGAGTGTCAGACGAAATGCGATAGGCGTATTATTCACAATAAGGCCGATTGCCAAGGTTGCGACTGTGATGGAAATTGTAGGAACGTAGATCCCAAAGATTTAGATCAGCTCGATAAAACTACGCAACGTAGATACTGTAATTCGTCCATTCTCTTTGATATATCCTCGTACCCATGCGCAGGGAAAAAATGCGGTGGAGACGGAAAATGCGGCTTTGGGTTCGCCGAAGGGTTTGTCTATTCTACGTGCGTTTGCTACAATAACTATAAAGGATGGGATTGCTCAGACGGTGCAAATGCCAATACAATGTTTGAAATATGGCTGGAGTTGTGCCTTTTGGTGTTCAGCAACTTTGCATTCGGAGTAGCCGTTTACGTAGCTTACAAACGCAACTACTACGTTGAAGGATTGGTCTACGCTTCTATTTTAGTTTCATCAACATTTTACCATGCCTGCGATGCGGGTGAAAACCGAATCAATTactgtttatttgatttaaatgttttgcaGTTCTGTGATTTCTACTGtgcaatattatcaatttgGGTTACGCTGATTGCCATGGCGTATCTGCCTAGTCCAATGCCGCACCTCTTTCATATTGGAGGCGCGATATTTCTGGGAGCCGCGATCACCATGGACAAGACCTCACTCTGGGTGTTTGTGATACCAGGCGCGGCAGGTTTcctaacaattataattagttgGTCGATCCGCAATTACCGCATATACAAAGCGAGGGATGCGCGCATCAAGATATTCCCCAAGAAAACGTATTTACTGTTTTATTTACCGACTGGTTTAATAATTGCGCTTGTGGCTTTGCTTGCGTTTGCACTTTTTCAGACGCATAGCAATTATAAGTATGTCCATAGTTTGTGGCATATTTTGATGGCCatagttgttgttattgtctTACCTAAAGTAGATGTGTTCCTACCAAAGCCAACAGATTCTAATGCAACTAATTCTACCCatgaatga
- Protein Sequence
- MQRNNAEAERRNGVYGREAQSDSQERALFNIDSTFIESARALFCRRQVGKIRVKNREPVPIYAMETEQQERESDLGEESPVSNHDEELSEGESTGHHEDIDSSDELRRHNSLLADHGDVLAKLKMQVRDIKVGEDFDTSRLQFPMNNRSDGFQLPVPFPFPHPAAAFLPPMAPQQTTAPSSGSSHSSEGSNASSQHTWSFEEQFKQVRQLYEINDDPKRKEFLDDIFSFMQKRGTPINRLPIMAKSVLDLYELYNLVVARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKGFSTPAELQAAIDGNRREGRRSSYGQYESVQRSPNPSQMSPLSFVSQQQQLAARMNSVMSGGGGIGMHNGAHHPSHPTPLGQPLSAGPLPGLAPSEFEARMMQYVKLLNKEVRSSASTPPRHGDQSPPNETSPLNPLEMTRMTLWNLYNNNQPQVEPQKEALNLADAAPVIVKREPEQRESPPPAKKFVKDEDDRPQSKSMSPSTNIKINSRGDARNGDNSLVIVHCSEWNLISQTRTTFLEVYNNYIDAVVMHFDIPEDSIEAMFEFRGSMPLSKVISCPTKDIELYLQYGAPPVINPDGSEFPKDFLLNRREHILRIKFATNKVYTHINISSPIPGSYYAAAFHPYVNPKDQGITQDGLVPVCDSFIDASIYVKQLNVTPIVSEQSFTVNLKPKETKLFKFYIPLSIFKVIVVASNFKPCTICEKVLVTLYPSTTLSGSINATIDDTHLSSSFRVLGDDDYYIKLISNVTTNSKLIDDETTFTFLIKFVEIPDYLIDDDRREMPEPVFLNASHMYYTPPTPSVAWKYNEYDLHKSRNTESFQFTYELEHLEDGLIPVDIKVSSVGFSALKFNVRDVLDVGGTLSIALAFFPRIERSGGWIHIKKEPAHHSLVACLRRAGIEVPIWKDNCMYLDNISQSPLVLNNSVSNSSFTIPYPEPGNWYLTFKLFCGECRPCNCSQACKDALSECIKQCEAECDYDCFECQTKCDRRIIHNKADCQGCDCDGNCRNVDPKDLDQLDKTTQRRYCNSSILFDISSYPCAGKKCGGDGKCGFGFAEGFVYSTCVCYNNYKGWDCSDGANANTMFEIWLELCLLVFSNFAFGVAVYVAYKRNYYVEGLVYASILVSSTFYHACDAGENRINYCLFDLNVLQFCDFYCAILSIWVTLIAMAYLPSPMPHLFHIGGAIFLGAAITMDKTSLWVFVIPGAAGFLTIIISWSIRNYRIYKARDARIKIFPKKTYLLFYLPTGLIIALVALLAFALFQTHSNYKYVHSLWHILMAIVVVIVLPKVDVFLPKPTDSNATNSTHE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -