Basic Information

Insect: Anastrepha obliqua
Gene Symbol: Bcl11b
Assembly: GCA_027943255.1
Location: JAPTHQ010000157.1:2855242-2879550[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 9.9 1.4e+03 1.4 0.1 2 11 12 21 11 24 0.86

2 7 0.028 4 9.4 2.4 1 23 208 231 208 231 0.95

3 7 1.4e-05 0.002 19.8 1.0 1 23 638 660 638 660 0.97

4 7 0.039 5.5 9.0 4.6 1 23 666 688 666 688 0.99

5 7 2.2e-07 3.1e-05 25.5 2.9 2 23 934 955 933 955 0.97

6 7 1.6e-05 0.0023 19.6 3.3 1 23 961 983 961 983 0.99

7 7 3e-05 0.0041 18.8 0.4 1 22 991 1012 991 1012 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	9.9	1.4e+03	1.4	0.1	2	11	12	21	11	24	0.86
2	7	0.028	4	9.4	2.4	1	23	208	231	208	231	0.95
3	7	1.4e-05	0.002	19.8	1.0	1	23	638	660	638	660	0.97
4	7	0.039	5.5	9.0	4.6	1	23	666	688	666	688	0.99
5	7	2.2e-07	3.1e-05	25.5	2.9	2	23	934	955	933	955	0.97
6	7	1.6e-05	0.0023	19.6	3.3	1	23	961	983	961	983	0.99
7	7	3e-05	0.0041	18.8	0.4	1	22	991	1012	991	1012	0.97

Sequence Information

Coding Sequence: ATGGAAACAGATCCTTCGGCGCAGGATATGCTAACGTGTGGATCCTGCCAAAAAACATTTGCTCTTTCGGATATAGTTAGATTTATACAACACAAAGTGCTACAATGTAACAAAGAGAACTACGGCCAATGTTCAACTCAAGCTCCGACAACCGATAGAGATGCGGACGATGGTCGACCTTTAAGCCTAGTGAACAGAAGGCCTTCAATATCAGCTCCAATCATTAATCGTAAAGCGTCTGGGTCCGGCTCACGCATCCATACACCTCCACCAAGCCCCGCGGATCTTTTAGCTGATGGTGCGTCTAGCACCCCCAAGCGCTTAGTCGATGAAAACGACAACACAACACCCAGGAATGAAGGAGTAGCCGAGAAAAATACATCTTCGGAATGCGCCAGCACTAATTTAACTGAGGCTTTTGTTACAAGTGATTCAGAAAAGGTAAACACTATAAGGATAAAGCAGGAACAAGAGCATGTCAATGACGAAGCGAGCATAAATATCGCGTTACATGCACACGATTCCAGCCAGGACAATAACGATGGTCAACCGATGTCAAAACGTCCTAAAATTGAAATGGCTGACGCGGAATCTAACACATTGCACACAGAGCCCAGCTATTACACATGTTCTACATGCAAGACTCGCTACACATCTGCCTGGCGTTTAATTCAACATGTGCAGCATTCGCACGGCGTTAAAATATATGTAGAATTCCCCTCTTCTTCTTCCTCACATTCCAGCAGCTCAATTTCGGATCCTGCCTCATCGAATTCACTATTATTAACGCATCCACACTCAACATCAATGCCCGTAGTTGTATCAGCACCGACAATAACCTCAGAGGTATCAACGACGCAGCCTTTGTCGACTTTACCCTCCGCATCGTCTTTGTATCCGCCCATCAGTCATCAATCACAAAAATCTGATAACTCGAGTACAAACTGCAGCATTAGTAGCAGTGGTAGCGGTAGTGGCAATGCCTCAGCCAACTTACCAGCGCCGATTTGTAGTGGTCACTCAAATGCTGTCCAGCAACAACAAATCCAACAACAACTTCAACAACACCGAGTAGCCGTTGCTGCGGCTGCAGCAGTTGAGCAGCATAAGCAACAACAGCAAAGCAATCTAACAACAGCAATGCAAAATGCGCAAAACTTAGCGGTAGCTGCGGCTGCGGGTATTCGTCATCATAGCCTGTTGCCACCACCAGACATGCATGCAAATCCGTTTAATCTGCTGCGAATGCCTTTACCACCGTCACTGGCACAAAGTCCTGTAGTTCCTACTGTCTCACCCCTGTTTTCACGGCCCCACCCCGATCATTATAGAATGGAGCAACTGGTATCGGAGCAATTTCGACACCACGGCCTCAACTTAGCAGCAGCAGCTGTTGCGGCCGCTAACTCTCTTACCACTCCGCACTCTGGTGCATCACAATTCAGTCAGGGTAATGGCACTCCTTCCAGCGGTTCGATGGAACCGCGACCGCCCTCTAACAGTAATACCCACCGAAGCTCTGCGCCACCCACACCTTTGCCACCTCCACCAATAAGCATTCCACAACAAAATACTGCTAATCAAGGAGGGCCTCAGACTGGTATGAATCTTGAACCACAGATGGATTTTTACTCGCAGCGATTGCGTCAGCTTGCAGGAACAACAAGTCCTGGGGCTGGAAATATTGTTAACTCGAGCTCGCCGAGTCCAAGACAAAAGCAATCGCCACATTTTGCGAGCCCTTCACCATCCCAACTACCTCCTACACCAGTGACAAACAATACGCGGCCACATTCATTAACTCCTCCACATAAGAGCGATTCTGTAAATCAAGAAAACGAAAATATCAACTCCACGCCACGATCAGCATCTACGCCACCTTCAAAACCCAGCCAAGAGAATACCGCAGTATTCGCATGCGCTTATTGTGAGAAGAAATTTCGATTTGAAAATAATTTGATTATTCATCAAAGGACACACACCGGAGAGAAACCCTACAAATGCACAGCCTGTGAATTTGAATGCTCGCATATCAATAAATTGATGAAACATATGCGAGTTCATCGTAGTCCAGAGGATGGTGCAAGTAATGCAGGTTCGGTAGATTCTAACGATGCCGAAGACTCAGAAGCTGATGCCGATGCTGACGCAGAAGCAGAAGGAGAGGCGGAGATCGATGGGGAGGAAGATAACATGGATGAAGACGGAATGGAAGAAGATGAGGAGGACGATGCGGAAGATGGCGAAGATATCGATTACGAAGCCGAAGATCTAAGTGTTAGTAATCGGATAGATGGAAAGAGCGAAAGCCCAAAAACCACAAGTACCGGCCCTACATCGTTGGTAGGCGAACTAATGGATAAATTTGGCTTATCGAATATAGCGCAATACTCCGAAGCCTATAAACAGGCATTACAAGAATCTGGAAAATTCAAGTATTTAGCAAATAAGGATAGAGACAATAATAACTCAAGCAATTCAGGAATATCACAGATATCAGATAAATTGAACGGTTTCCCAACAGCACTACGTCTACGGGATGAACTTTCGAAGAATATGTTCCAACAGTCATCTCAACCTGATGCCTCAAGTCAAGTGCCGCTCTTCAACCCATTTCAAAATCCTTTTGAATTATCGAAACGTGTTAAAATGGATAGCAACGACTGGTGGAATATGTCAGCTTTACATCGAAATGATTCACTTTTCGAGAATCTAAAAATGAAACCTTTAGGACTGGGTACCGCCAACTCAATGCTCCACAATTCAATGCTAAAGAAGGATAATCGTCAACGCAATGACACATGTGAATACTGTGGTAAAGTGTTCAAAAACTGTTCCAACTTAACTGTACATCGTCGCAGTCACACGGGTGAAAAACCATACAAGTGCGAATTGTGTTCCTATGCCTGTGCGCAAAGTTCCAAATTGACTCGCCACATGAAAACCCACGGACGCACTGGCAAAGATGTCTACCGTTGCCGCTTCTGTGATATGCCCTTCAGCGTGCCGTCGACATTGGAAAAGCACATGCGCAAATGTGTTGTCAATCAAGGCAAAGCAGCGGCTGCAGCAGCAAATGCCGCAAATGCAGTAGCCGCCGCACAAGCTGCCGCTGCAGCCCAACATCTCCAATCACAATTGCCAACACAATTATCACCTGCAAGCTCACTTTCATCATTCCCATCTCAATTTGTTGGCATAACCGGCAGCAATACTGGCAACAATATTTCACTGCCCGGTAGCATTAGTGGCGATAACGACGCAAATCTACCAACAAGCCTGCCAACACACCCCATCTCATTGAAAGAAGAGGCATGA
Protein Sequence: METDPSAQDMLTCGSCQKTFALSDIVRFIQHKVLQCNKENYGQCSTQAPTTDRDADDGRPLSLVNRRPSISAPIINRKASGSGSRIHTPPPSPADLLADGASSTPKRLVDENDNTTPRNEGVAEKNTSSECASTNLTEAFVTSDSEKVNTIRIKQEQEHVNDEASINIALHAHDSSQDNNDGQPMSKRPKIEMADAESNTLHTEPSYYTCSTCKTRYTSAWRLIQHVQHSHGVKIYVEFPSSSSSHSSSSISDPASSNSLLLTHPHSTSMPVVVSAPTITSEVSTTQPLSTLPSASSLYPPISHQSQKSDNSSTNCSISSSGSGSGNASANLPAPICSGHSNAVQQQQIQQQLQQHRVAVAAAAAVEQHKQQQQSNLTTAMQNAQNLAVAAAAGIRHHSLLPPPDMHANPFNLLRMPLPPSLAQSPVVPTVSPLFSRPHPDHYRMEQLVSEQFRHHGLNLAAAAVAAANSLTTPHSGASQFSQGNGTPSSGSMEPRPPSNSNTHRSSAPPTPLPPPPISIPQQNTANQGGPQTGMNLEPQMDFYSQRLRQLAGTTSPGAGNIVNSSSPSPRQKQSPHFASPSPSQLPPTPVTNNTRPHSLTPPHKSDSVNQENENINSTPRSASTPPSKPSQENTAVFACAYCEKKFRFENNLIIHQRTHTGEKPYKCTACEFECSHINKLMKHMRVHRSPEDGASNAGSVDSNDAEDSEADADADAEAEGEAEIDGEEDNMDEDGMEEDEEDDAEDGEDIDYEAEDLSVSNRIDGKSESPKTTSTGPTSLVGELMDKFGLSNIAQYSEAYKQALQESGKFKYLANKDRDNNNSSNSGISQISDKLNGFPTALRLRDELSKNMFQQSSQPDASSQVPLFNPFQNPFELSKRVKMDSNDWWNMSALHRNDSLFENLKMKPLGLGTANSMLHNSMLKKDNRQRNDTCEYCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRTGKDVYRCRFCDMPFSVPSTLEKHMRKCVVNQGKAAAAAANAANAVAAAQAAAAAQHLQSQLPTQLSPASSLSSFPSQFVGITGSNTGNNISLPGSISGDNDANLPTSLPTHPISLKEEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00091710;
90% Identity: iTF_00091710;
80% Identity: -