Basic Information

Insect: Anastrepha obliqua
Gene Symbol: -
Assembly: GCA_027943255.1
Location: JAPTHQ010000157.1:6628306-6630367[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.074 10 8.1 0.0 1 23 414 436 414 436 0.97

2 7 2.6e-05 0.0036 19.0 2.0 1 23 442 464 442 464 0.99

3 7 1.2e-07 1.7e-05 26.3 0.1 1 23 470 492 470 492 0.98

4 7 3.6e-05 0.005 18.6 1.2 1 23 498 520 498 520 0.98

5 7 0.00012 0.017 16.9 3.0 1 23 526 548 526 548 0.98

6 7 0.00015 0.021 16.6 2.9 3 23 556 576 555 576 0.97

7 7 1.3e-05 0.0018 20.0 0.3 1 23 582 604 582 604 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.074	10	8.1	0.0	1	23	414	436	414	436	0.97
2	7	2.6e-05	0.0036	19.0	2.0	1	23	442	464	442	464	0.99
3	7	1.2e-07	1.7e-05	26.3	0.1	1	23	470	492	470	492	0.98
4	7	3.6e-05	0.005	18.6	1.2	1	23	498	520	498	520	0.98
5	7	0.00012	0.017	16.9	3.0	1	23	526	548	526	548	0.98
6	7	0.00015	0.021	16.6	2.9	3	23	556	576	555	576	0.97
7	7	1.3e-05	0.0018	20.0	0.3	1	23	582	604	582	604	0.96

Sequence Information

Coding Sequence: ATGGCACTCGATATTAAGGAAGAAATTAAATTGTCAAATACGAAAAAATGTGGGGAAATAACAGCATTGTTCTCTATAGGAAAGAAAGATTTTTTACTGAATTGCGATTTTTGCGAATGTTCTTTCCTACAGTTGGAAAACTTCGTGTGTCATATGTACGAAGACCATCCGTCCGAATTTCCAGAGCTACAATCTGATGAAGAAAATGTGCAAATATATGAGGATAACGAAAATGTGAAATCTTTGGTGAAGCTAGAAAGGATAGAGGCGAGTTTGGATGAATTCAAAAGTTGTATTAAAAATTTTTATCTAAAAAATGTTTTACAGGTCGTCGAGGATTACGATAGTTGTTCAAGAGATTTTGAAAGAGTTGAAATAGAACTGGATTCAGTCGATACAAGGGAGACACTAGATAACAGTGAAGACGAGATATCAGGAAACGCAATGGACGAATGCAGTTATGATATGAATAGCTATGATGAATCCAATGATACTGAAGGGTCATATAAAGTTTGTGAGAATAATGATGACGTAGAAGCGATTGCTGAACGAGAGTCGATCGATCTGAAGAAAATGTTCCCTATCGCGAAGATGCAGTTAATTTTTTCAAGTTACGTAGCTCATCCTGCGCTATGGGATAAAGAAATTAGAACTTCAATATGTTATAAAGAGAAAACCGAATTGTTCAAGATTATAGCTGCAGAAGTAGGCATGCCAGATGAATGGGAAAACATTCGAAAGCTAGTTAAGAAACTACGCTTTAAAATTCAAACAGAGATTATACGCAAAAGGATTTATGAATCAAAAGGCCGTTTGTATACACCTACTTGGTATACAGATCCGCACTCTTTTTTGAAACAAAGGCCTGGTCCACCAAAAGAGCCCAAAGTAGAAGCAACAAAAAGTTGCGATCTTCCTTCCACATCTATTACCGATGCGCAATGTGTGATTTTAGCTGCACTTTACAAAGGTTTACCATGCCTGTGGAATGAAAAAGATATTACCTATAGATTTAGTAATCGACGCCGGGAAGCATTGACACTTATACATACAGAATTTAACATGAAATCTGGACTAAATATAACCGAACAAGATTTGGAAAGAGAAATTGCAAGGCTGCGGAAAATTTGTTCGAAAGAAAAGAGACAAAAAATAAAGTACAAAAAAACTCAATCTATGTATATTCCAACTTGCCCGTATTATGATCACATTTCATTCCTCGAAGTCGATGTTGGCCCATATGAATGCTCCATATGTGAAAAATTATTGGCGGGATTGGGACAGTACAAAGTTCACTTAGCATCTCACGATGGTTCGCTGCCATTTAAATGCCATCTCTGCGGACATGGTTTTCAGGTGGCCGCTAATTTAACCGTCCATTTACGAAGACATGTCCAAGACTACACGTATATATGTGAGATATGCGACAAAGCTTTTGCTACATCTACAGATTTAAAAATTCATATACGTTCCCACACTGGTGAAAAACCATACTTTTGTGATATTTGCGGTAAAAAACTTCAAACCGCATCACTATTCAGTACGCATATGCGACGGCATGAGAATCGACCACGCCACAAGTGTGAAGTGTGCTCAAAAACTTTCTATACAAGAAAATTAATAAGGGAGCACATGAATGTACACACAAAAATTCGAGACAAAATTTGTAATGTTTGCAACAAAGGATTCACAAGTACTAAACACTTGAACCAACATAAACAGATCCATGCAGCAGAAAAGAAATATTTATGTAAAATTTGTGGTAAACGCTTCGCACAATATGCAGGTCTTAGTGGACATATGAAATCGCATGGGACAACGTTAACCAACAGCACAACTAAAGACCTTCTTGATTAA
Protein Sequence: MALDIKEEIKLSNTKKCGEITALFSIGKKDFLLNCDFCECSFLQLENFVCHMYEDHPSEFPELQSDEENVQIYEDNENVKSLVKLERIEASLDEFKSCIKNFYLKNVLQVVEDYDSCSRDFERVEIELDSVDTRETLDNSEDEISGNAMDECSYDMNSYDESNDTEGSYKVCENNDDVEAIAERESIDLKKMFPIAKMQLIFSSYVAHPALWDKEIRTSICYKEKTELFKIIAAEVGMPDEWENIRKLVKKLRFKIQTEIIRKRIYESKGRLYTPTWYTDPHSFLKQRPGPPKEPKVEATKSCDLPSTSITDAQCVILAALYKGLPCLWNEKDITYRFSNRRREALTLIHTEFNMKSGLNITEQDLEREIARLRKICSKEKRQKIKYKKTQSMYIPTCPYYDHISFLEVDVGPYECSICEKLLAGLGQYKVHLASHDGSLPFKCHLCGHGFQVAANLTVHLRRHVQDYTYICEICDKAFATSTDLKIHIRSHTGEKPYFCDICGKKLQTASLFSTHMRRHENRPRHKCEVCSKTFYTRKLIREHMNVHTKIRDKICNVCNKGFTSTKHLNQHKQIHAAEKKYLCKICGKRFAQYAGLSGHMKSHGTTLTNSTTKDLLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00081585;
90% Identity: iTF_00081585;
80% Identity: -