Basic Information

Insect: Anastrepha obliqua
Gene Symbol: RREB1
Assembly: GCA_027943255.1
Location: JAPTHQ010000087.1:785426-794100[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.02 2.8 9.9 2.1 1 21 296 316 296 318 0.95

2 14 0.00042 0.059 15.2 0.1 1 23 328 350 328 350 0.98

3 14 3.3e-05 0.0046 18.7 7.5 1 23 356 378 356 378 0.98

4 14 7.9 1.1e+03 1.7 2.9 2 19 670 687 670 689 0.94

5 14 0.0054 0.76 11.7 0.3 2 21 703 722 702 723 0.94

6 14 0.012 1.6 10.6 0.1 1 23 890 912 890 912 0.97

7 14 3.2e-05 0.0045 18.7 1.3 1 23 922 944 922 944 0.99

8 14 0.00086 0.12 14.2 2.2 1 23 950 973 950 973 0.97

9 14 0.0042 0.58 12.0 2.0 1 23 1284 1307 1284 1307 0.95

10 14 0.00012 0.017 16.9 0.3 2 23 1665 1686 1664 1686 0.97

11 14 0.2 28 6.7 6.3 1 23 1692 1715 1692 1715 0.97

12 14 4.3 6.1e+02 2.6 5.0 1 23 1830 1853 1830 1853 0.97

13 14 0.012 1.7 10.6 0.5 3 23 1909 1929 1907 1929 0.96

14 14 0.0019 0.26 13.1 4.8 1 23 1935 1957 1935 1957 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.02	2.8	9.9	2.1	1	21	296	316	296	318	0.95
2	14	0.00042	0.059	15.2	0.1	1	23	328	350	328	350	0.98
3	14	3.3e-05	0.0046	18.7	7.5	1	23	356	378	356	378	0.98
4	14	7.9	1.1e+03	1.7	2.9	2	19	670	687	670	689	0.94
5	14	0.0054	0.76	11.7	0.3	2	21	703	722	702	723	0.94
6	14	0.012	1.6	10.6	0.1	1	23	890	912	890	912	0.97
7	14	3.2e-05	0.0045	18.7	1.3	1	23	922	944	922	944	0.99
8	14	0.00086	0.12	14.2	2.2	1	23	950	973	950	973	0.97
9	14	0.0042	0.58	12.0	2.0	1	23	1284	1307	1284	1307	0.95
10	14	0.00012	0.017	16.9	0.3	2	23	1665	1686	1664	1686	0.97
11	14	0.2	28	6.7	6.3	1	23	1692	1715	1692	1715	0.97
12	14	4.3	6.1e+02	2.6	5.0	1	23	1830	1853	1830	1853	0.97
13	14	0.012	1.7	10.6	0.5	3	23	1909	1929	1907	1929	0.96
14	14	0.0019	0.26	13.1	4.8	1	23	1935	1957	1935	1957	0.99

Sequence Information

Coding Sequence: ATGCTCGCCGCAGCAGCCACTGCTACACAATCATCATTGGAAGCCATCCAATCGAACGTCACAAAGATGGAACGACGTGACTCATCGACGTCGGAATCATCCTTGGAACATTTGGACTTGGGACGTACACCAAAGAAGCTAAGCTCACACTCATCAGCCACATCCACACCACATACGGCCACCATTGGCAACAACAACACAAACAAAGCCAACAGCAATGAACCAAATACAACCACAGATGCCACGAGTGCGATCATCACATCATCCTCACCATCCGATCGCACTAGCGCTAGCTGCGCCAAAACATTGCTGTCTCACAAACGTCGTCCGCACGACTCCGACGAGGCTAATGATTATGATGATGATGAAGAGGAGTCGCCAGATGAGCAGCGCAACAAACAGAATGCGCTCAGCTCGCGATCACAGCGTCATCACAAGCGTCGCTGCACAGCGCCGCGTCTAGATAAGCGCACCAGCGTTCAATTGGAATTCAATGCGGATGATCCTAATTCACTGCGTAAGAAGTTTCGCTTCAATCGTAGTGCCTCCGCCACCGAACAAATGACAAATAATAATGAGTCTGGTTTCGTGGACGCCAGCTGTAGTAGTCATTACCTGAATGCATCGGCAGTATCTTTGGTGGCGGCGGCGGCAGCGACGGCAACAACATCTGCTGCATCCGCATCGCTTATGGGTATTAACTCGACGCCACCTCATAATTCAATGTCGGCATCGACCTCAGCTTCTGCCTCGGCGAACGGTTCGCACAGCTCATCGTCGGCTGCTTCGTCGCCGCGTGGCTGTGGCACCGGCTTGGCTGCATCATCCGCCTCGGTGTCCAGCCCAGAATCAGGTATCGGTGATAGAGAACGCGAGGACATGAAGTTTGTGTGCACCATTTGCGATGTGGTGTCGGCGACGCGACACGAGTTCACGAATCACATACGTTGCCACAACTACGCCTCTGGTGATACGGAGAACTACACATGCGCTATCTGTTCCAAGGTGCTCTCCTCCGCCTCATCACTGGATCGGCATGTGTTGGTGCACACTGGCGAACGACCCTTCAATTGCAAGTATTGCCACCTCACCTTTACCACCAACGGCAACATGCATCGGCACATGCGTACGCACAAACAGCATCAGCACAATCATCATCATCGCCGCAACTCGAATGGAACAAAACATGCCAGCAATAGTCATAACAACAACAGCAACAACACAGCACAGTCTAGCAATGCGACTGGCGCGGCTGTGAGTAGCGGCGCCGCAACCAACGCCTCCACTAACACCGCCACCAACACCACTTATACGCAATTAAGCCATGGCTTGATTAGTGAAGTTGTCAAATCATCAACAGCAGCAGCATCAGCGGAAGCCATGGAAGCAATGGCAGCAGATGCTGGTACGACCGCTGCGGCTGCCACTTTGATAGGTAGCGCTGGCGGTGCAGGTGTTAATGGTAAACGCTTACATAGCAGCGGCGTAGAAAGTTGCGAAAGCGACGGTGGTTGCTCCACAGACACCTCATCAAGTGCCATTAGCATTAGCTCAAATCACAAGCATAACAACAAAAATAATAACAGCGACAACATTAACAATAATGCCGCCAACAATAACAATAAAAATATTAACGCAAATCGAAATAGTTTAGATAATTTTAAGCGTAAATTCAGTGATCTACACGATGAAGCCGACGTTGAGGCTGACGACACGACAATGATGTTAGCGTTGAAGCGACGCATGAAGACCACAATAAACAACAACGTCATCGGCGAGGATGTGCATGCAGTTGGTGTTCCTGTCGACCATAAAACTGAAGGCGACGCAGTCGTAACCAAAAAAATGCATACATCCTCCTCTGCATCGGCGGCGTCAGATGACGAGGACGCTGAGCATAAGCCACACTTCCAGTACCCGGTTTGTCCTGTCTGCAATGCTGATGAATTTGCGAATATGAACGCTTTGGATCACCATCTGGAGACTGTACATGCCGATATACCAGCGAAGTGTCGCCTCTGCGCGGTGGTGTTCCGCAAACACAGTCAACTGAGCATGCATTTCTGTCCACAGAGTATGCCCGGTAACGTTCAACTGCCGCTGAAGGAGTGCGTGAAGTGTAGCCGCAGCTTTCCCAATAGCAAGGATTTAGAGTTGCACACACGTGAATGCGACTCTGCCGTGGTGCGACATAAGCGGCGTAGTCGCAGCCTTAGCGATAGCTACACGGTGCCGCCTCTGTCGGAAACCGAAATCGAGGAGAAAACGAGTCTGGCACGCAACAACTTTTTTCGTCAGCTCTATTTGCAAAGTCAAAAACCTTTCTGCGCACAGAGTATGATCTCACTGCCCTCGCCTCTGCACTCAACTAACGAGGAGGGAGATGCGGGTAATGTAAGCAGCACCGATATCAAACAAGAGGCAGATACTGAGCCGACAGATCAGTTGTCGAGTAACTTGCTCTCACAACAATCGCACGACTCGAAAGATTTGGCCGATATCCAATCCATACTCAATATGACTTCGTCATCGTCCACTTCGAATTTTCTGAAGAACTTTGAGCAATCGGTGAACACACCTTCCAGCAATTACAGTTTGGATAAAGACGAGGAGGAGGCACAAGATGCCTTTACATCTGAGTTTCGTAAAATGAAATTGCGTGGTGAGTTCCCGTGCAAACTTTGCACCGCAGTCTTTCCGAATTTGCGCGCGCTAAAGGGCCACAACCGCGTGCACTTGGGTGCCGTAGGTCCGGCGGGACCGTTTCGCTGCAACATGTGCCCTTACACGATATGCGATAAGGCTGCGCTTGTGCGTCACATGCGCACGCACAATGGCGATCGTCCCTACGAATGTGCAGAGTGCAATTATGCCTTCACCACAAAGGCCAATTGCGAGCGACATCTGCGCAATAGACATGCCAAGACTACACGCGAGGAAGTGAAACGTGCCATCATTTACCATCCATCCGAAGACTCAACTTGCGAAGATCCCGCAAAAAAACTGCACATGTTCTCCTCGCCCGACTTTGATGATGACATGGAATTGCAATACCAGCAACATCATCCCAAGGATCGTTCCACACCCGTATCGCACCTTAAGGAAATGTTGACTGCCGAAAGTCCGTCAGCGAAGCCAATGAAGATACAGGTTAAAAGTTTGGAACAATTACTTGATAAGTCCCCCGGTTTAGTTGGTAGCTACAATGAGTCGTATGAAGAACGCCCTGCGCCACCCAGCATGCAACATTTGGAAGCCGCACCAATCGATCTGAGCATGGACGTTTTGGATCTTAGCAAGAAACCCGCAATTAAACCGATTGAAAAAGAGGTCGTGGCCGCGCCAATGCCAATGGCGGAAAACGGCATCGATCCTGAGAAAAAGCTCGATATTTTTTCGTATGTTAAGGAGAATCTGAATATGCCAAAAATGCTTGAACTCTGGAGTTTGTCGGCCCAATTCCCCTTCATGCCCGACTTCCGTCCACTGATGAATCAAATGTTCGCTGGCACTGCTGCTGGCAACCCATTTGTACAGCCCGGTATTGACATGAATAAAGCAAATATGCCCGCGCCACCAAACATGAGCGCTCCAATGCTACCGCATTTGAGCTCACTAATGGCTGATAAGCTAAATACGCATCCACATTCTGCACCTGATCCAAATGTGTTGAACCAGATGCTACCCAAATCTTTAATGACACCTCCTGCTCCCAATACCAATATGAACATGCCACGTCACTCGCACATTCCACCGACCGTACTGCCAGGTGGACCTGTGAAAATGGTCATAAAGAATGGCGTGCTCATGCCAAAGCAAAAGCAACGTCGTTACCGCACCGAGCGACCATTCGCCTGTGAGCACTGCTCGGCGCGCTTCACACTACGCTCAAATATGGAGCGGCACGTAAAGCAGCAACATCCACAATACTACGCACAACGCCACCGCAGTGGACATCATGCTATGCGTGGCCGCGGCGCCAGCGGTGCGGCAGCGATGAATAGCATCACCCACTTGCAGGCGGCATTCGCTCAAGCGCACAATCAAGCCGGTCAAGGGCAGGGCAATGGACTGGGCGCCTCGCCCATATCCGAACAAGTGAAGTATGCCATACTAGCGCAGCAGCTGAAGGCGCGCAAGGACACCGACCTGCTGCAACAGGCTTTGGCACACGGCTCAAGCAGCATAGGAAATAATCACCATATGTTGTTGAATGCCACCGCCGCACTCGGACCGCTTGCGCCACCAAACGGGCTGCAATTCCCATTCAACCAATTGGGTCAGCCAACCAACATTAACGGCTCCATCGAAGACGACGAACCGAAATTGATTATTGATGAGGATGAAGATGACGATGATGTCGAAGAAATACTCGATGACAACGAAGAGGAGGAGGAGCTACAGATCGCTAACGAAAATGTCGAAAATATGCGTAAAGCTCAGCCACAACCGCCTGCTGTTGAAGAACTAAAGAATACGCCACCTGGCAGTGAGTGCACTAACGAGACGGCGAAGAAAGTGGCAGAAACAATACTGGAGCAGGCTATCAAAACCGGGCAAAAACTAAATTCAGCGTCTAGTAAACCCAATGCAACATTAGCAGCCAAGCCTGCACCTGCTAAGCCCATTGTGCCAGCAAGTCCTGCCGCACCCATTGCACCTGTCACACCGGCCAATACAATGAAAGCCATGATCGCTCAAGCCGAATCTGTCGGAAAATTCCTAAAAGAAGTGGCCAGCTCACCGTTCAAAGACGAGTCTCAGGACTTGGTGCCAGTGTCCAAGCTGGTCGACAATGCTACCAGCAACGCCGTTTCATTCAACAACTATTTCCGACCCAGTGACGTGGCCAATCACATGGAGCAAAGCGACGAGGAGGGCTTGGTTGCTTCCGGCAGCGCCAGTGAAAGCAATAACTCCGGTACCGAAGATGTAGCCACGCCAGTTGAACCGAAAAAGAAATCTGCCTATAGCTTGGCTCCGAATCGCGTCTCATGCCCCTACTGCCAACGCATGTTCCCTTGGTCTAGTTCTTTGCGCCGACACATACTTACGCACACCGGTCAAAAGCCATTCAAGTGCTCGCATTGTCCACTGCTTTTCACCACGAAGAGCAATTGTGACCGTCATTTGTTACGTAAGCACGGCGACGTGGAATCGGCGGTGTCTGTGTATGTGCCAACCGAAGATGTGAACGAGCCGATACCGGTGCCAAAGTCGGTCGAAGAGATCGAACAGCAGCAGCGACAGCGCGAAGAGGAAAAACGGAAGCGCAAAGCCGAAGAGGCGCAGTTGGAACGCGAACGGCGCGAAAAGGACCAACGTTTACAGCACGAGCAAGAACAACAAAGCAAACTGCTCAAACAATTGGCTGTAGCACAGCTACAACAACAACTTAATGTCTCAATGAGCGCAGCCAATACCAGCAGCGCAGATGCTGATGCACGCGCCAAAGAGAATCTTTCACAACTGAATGCCGATTTGCCCTACAAGTGTCACCTGTGCGAAAGCTCCTTTGCCGAGCGTTTCAACTGCCTGGAGCACATCAAAAAGCAACATGCGCCGGAATTTACGCTGTTGCTATCCAAAGGCGCCATCGCCAGCGAAGCAGAAGCCAACCAAACACAACTGATCGAAGATGAGGAACGACGCATAGGCGAAGAAGTCAATGGTTTCACTTCATTGTTGCCCAAATTACCAGCTTACACCAATCGCAAAGTAATCTGCGCCTTCTGTGTGCGACGCTTCTGGTCTACCGAAGACTTGCGGCGTCACATGCGTACACATTCGGGTGAACGTCCATTTCAGTGTGAGATCTGCTTGCGCAAATTTACGCTCAAGCACAGCATGTTGCGTCACATGAAGAAACACACTCATCGTGGCCAAAATGGCGTAGCTGGTAGCGATGCTTCCACCACCGGCAACAGTGGATCCGACTTCTCAGACGATGAACAAATGCCTACACCGCCCACGTCTACGCTCAACAATACCGTCACGACGGCAACGACAACAGCCAATGCGATCGCGTCCGCATCTGCGTCTGCGTCGGTGGCTGCGCTGCGTACACCGAAAATACAGGAGCTGCTGAGCAAAGCCAATGAGTGGCGTAGCAGTAATTTGGGTGGTGAGCAGAAGGAGAATATAGCCGAGGAGCAGCCAAATGGATTGCATAACGATTTAATTGGTAATCTACTGGGCATCAGCGACCAAGGTATACTAAACAAATTACTCTCGTCTGCCGATGAAGCGGCCAAACTATTGGGTGTGGAGAAGTGA
Protein Sequence: MLAAAATATQSSLEAIQSNVTKMERRDSSTSESSLEHLDLGRTPKKLSSHSSATSTPHTATIGNNNTNKANSNEPNTTTDATSAIITSSSPSDRTSASCAKTLLSHKRRPHDSDEANDYDDDEEESPDEQRNKQNALSSRSQRHHKRRCTAPRLDKRTSVQLEFNADDPNSLRKKFRFNRSASATEQMTNNNESGFVDASCSSHYLNASAVSLVAAAAATATTSAASASLMGINSTPPHNSMSASTSASASANGSHSSSSAASSPRGCGTGLAASSASVSSPESGIGDREREDMKFVCTICDVVSATRHEFTNHIRCHNYASGDTENYTCAICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHHRRNSNGTKHASNSHNNNSNNTAQSSNATGAAVSSGAATNASTNTATNTTYTQLSHGLISEVVKSSTAAASAEAMEAMAADAGTTAAAATLIGSAGGAGVNGKRLHSSGVESCESDGGCSTDTSSSAISISSNHKHNNKNNNSDNINNNAANNNNKNINANRNSLDNFKRKFSDLHDEADVEADDTTMMLALKRRMKTTINNNVIGEDVHAVGVPVDHKTEGDAVVTKKMHTSSSASAASDDEDAEHKPHFQYPVCPVCNADEFANMNALDHHLETVHADIPAKCRLCAVVFRKHSQLSMHFCPQSMPGNVQLPLKECVKCSRSFPNSKDLELHTRECDSAVVRHKRRSRSLSDSYTVPPLSETEIEEKTSLARNNFFRQLYLQSQKPFCAQSMISLPSPLHSTNEEGDAGNVSSTDIKQEADTEPTDQLSSNLLSQQSHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSLDKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYTICDKAALVRHMRTHNGDRPYECAECNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSTCEDPAKKLHMFSSPDFDDDMELQYQQHHPKDRSTPVSHLKEMLTAESPSAKPMKIQVKSLEQLLDKSPGLVGSYNESYEERPAPPSMQHLEAAPIDLSMDVLDLSKKPAIKPIEKEVVAAPMPMAENGIDPEKKLDIFSYVKENLNMPKMLELWSLSAQFPFMPDFRPLMNQMFAGTAAGNPFVQPGIDMNKANMPAPPNMSAPMLPHLSSLMADKLNTHPHSAPDPNVLNQMLPKSLMTPPAPNTNMNMPRHSHIPPTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRHRSGHHAMRGRGASGAAAMNSITHLQAAFAQAHNQAGQGQGNGLGASPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSIGNNHHMLLNATAALGPLAPPNGLQFPFNQLGQPTNINGSIEDDEPKLIIDEDEDDDDVEEILDDNEEEEELQIANENVENMRKAQPQPPAVEELKNTPPGSECTNETAKKVAETILEQAIKTGQKLNSASSKPNATLAAKPAPAKPIVPASPAAPIAPVTPANTMKAMIAQAESVGKFLKEVASSPFKDESQDLVPVSKLVDNATSNAVSFNNYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVATPVEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVNEPIPVPKSVEEIEQQQRQREEEKRKRKAEEAQLERERREKDQRLQHEQEQQSKLLKQLAVAQLQQQLNVSMSAANTSSADADARAKENLSQLNADLPYKCHLCESSFAERFNCLEHIKKQHAPEFTLLLSKGAIASEAEANQTQLIEDEERRIGEEVNGFTSLLPKLPAYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHTHRGQNGVAGSDASTTGNSGSDFSDDEQMPTPPTSTLNNTVTTATTTANAIASASASASVAALRTPKIQELLSKANEWRSSNLGGEQKENIAEEQPNGLHNDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00082376;
90% Identity: iTF_00082376;
80% Identity: -