Basic Information

Insect: Anastrepha obliqua
Gene Symbol: -
Assembly: GCA_027943255.1
Location: JAPTHQ010000174.1:52720-54429[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00061 0.086 14.7 2.6 1 23 223 246 223 246 0.98

2 8 0.001 0.14 14.0 3.4 2 23 254 276 253 276 0.95

3 8 9.4e-06 0.0013 20.4 0.6 1 23 281 304 281 304 0.96

4 8 0.00014 0.02 16.7 0.1 2 23 311 332 310 332 0.96

5 8 0.00051 0.072 14.9 1.1 1 23 338 360 338 360 0.96

6 8 4.7e-05 0.0066 18.2 1.3 1 23 364 386 364 386 0.96

7 8 9.4e-08 1.3e-05 26.7 3.0 1 23 392 414 392 414 0.99

8 8 0.29 41 6.2 7.2 1 23 420 443 420 443 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00061	0.086	14.7	2.6	1	23	223	246	223	246	0.98
2	8	0.001	0.14	14.0	3.4	2	23	254	276	253	276	0.95
3	8	9.4e-06	0.0013	20.4	0.6	1	23	281	304	281	304	0.96
4	8	0.00014	0.02	16.7	0.1	2	23	311	332	310	332	0.96
5	8	0.00051	0.072	14.9	1.1	1	23	338	360	338	360	0.96
6	8	4.7e-05	0.0066	18.2	1.3	1	23	364	386	364	386	0.96
7	8	9.4e-08	1.3e-05	26.7	3.0	1	23	392	414	392	414	0.99
8	8	0.29	41	6.2	7.2	1	23	420	443	420	443	0.91

Sequence Information

Coding Sequence: ATGTGTACCACTTATGCCACAATGAGAGAATGGGAGCGTTGGTGTCGTCTCTGCGCGAAACATGATGGTTGTTACTTTGATATATTTCTTGAGCAATTCCCACAGTCTCTGGGCTCGGAAGTAAATCTTCATTCGATTATAGAGGAATTCTTCCATATTAAGATAAAGCCTAGAGATGGACTCCCAATATCACTGTGTACTGAATGTTGTTCTGCAATTGCATCTTTGGAAAAATATGCGGAACATATAAAGAAAGTTCAAAAAATGTACAAAGATTTAAAAAATACAGCAGAGTTCGCCGATATAAACCTCAAAGATTTATATCAAAAATACGGTTTATTTAAATGTGAACCAAATCTGCCCCAATCAACAACATCTGCAATCGAACAAATATTTGTTCCTGTAAACCCAAATACAGTCGTTAAAGTTGAAGAAATGGAAATAACGGAGTCAAAGGAAGTAAAACACGAAACTGAAATCGATGTGGATTTCCACGATCCTTTCGCAAACAATAACCAGAATGTGGAGGAGAGCACTCATATAAGTGAAGATAGTGAAAGCAGTAACAATAAAACTGACCTTGACCCTGACTCTAACTCTGACGATTTTGTACAACAAAAATTGGAATATATTAAAAATGTCAACGAAGTCGAAGAGGGAGGCAGTTATTCTTGTAATATCTGCCAACTGAGTTTTATGCAAAGCAGAAAGTATATGTATCACATGAAAAGTAATCACGGCACAGAAACTCCTTTCTGGAATTGCTTGCACTGTAGTAGTTCTTTCAAATATAAAAGGGAGCTGGAACGTCATACAAGGAAAATTCACGCACCGAGTGTTTATCCGTGTCCACATTGTGATCGAAAATTTAAAAGAGCCAAAGATGCTGAAAATCACATTAAAGCTGAGCACGAAGGTGCATATTCCCTAATTTGTGAAGAATGCGGTGAAAGTGTGCGTACAAAACAGAAACTTTTCGAACATATGGCCATACACACAGGCCGTGGGGCCTATGAATGCGAAGTGTGCGGTAGACATTTTTTGCAAAAACAAGCCTTAAAGAGGCATTCAGAAATCCATGGAGATACACATATTTGTGGAGAATGTCTTTTAGAGTTCAAAACATCCAAAGCACTTAAGAGGCATATGAAAGTGCATTCCGATGAAATGCCATACAAATGCAATTATTGCGGGCGTAGATTTAAGCGTGCAAAAAATTTGAAGTATCATCTTATTACGCATACTGGTCTCAAACCCTATTCGTGTGATTTCTGTGATAAAACATTTTCAACTGGATCAAGTTGTCGTTATCACAAAAAACATTTACATCCAAAGGAACTGGCCGAACAAGAAGCGGCGGGCGTAAAAACGTATACAAAAAATATACCCACATTGAATGTGTTAAGAGCGATAACGCAAGTTGCTGGAAAAATGGAAAAAGGTGATGGTTGTATAGGCGATAAGAGAATCAAAGTTCCAAAACTAGATGCTGAGTTACCTGATGGCTAA
Protein Sequence: MCTTYATMREWERWCRLCAKHDGCYFDIFLEQFPQSLGSEVNLHSIIEEFFHIKIKPRDGLPISLCTECCSAIASLEKYAEHIKKVQKMYKDLKNTAEFADINLKDLYQKYGLFKCEPNLPQSTTSAIEQIFVPVNPNTVVKVEEMEITESKEVKHETEIDVDFHDPFANNNQNVEESTHISEDSESSNNKTDLDPDSNSDDFVQQKLEYIKNVNEVEEGGSYSCNICQLSFMQSRKYMYHMKSNHGTETPFWNCLHCSSSFKYKRELERHTRKIHAPSVYPCPHCDRKFKRAKDAENHIKAEHEGAYSLICEECGESVRTKQKLFEHMAIHTGRGAYECEVCGRHFLQKQALKRHSEIHGDTHICGECLLEFKTSKALKRHMKVHSDEMPYKCNYCGRRFKRAKNLKYHLITHTGLKPYSCDFCDKTFSTGSSCRYHKKHLHPKELAEQEAAGVKTYTKNIPTLNVLRAITQVAGKMEKGDGCIGDKRIKVPKLDAELPDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00083366; iTF_00081626; iTF_00082426; iTF_00082378; iTF_00083368; iTF_00082382; iTF_00081577; iTF_00082391; iTF_00081571; iTF_00083316;
90% Identity: iTF_00082382; iTF_00081577; iTF_00083316; iTF_00082391; iTF_00081571;
80% Identity: -