Basic Information

Insect: Anastrepha obliqua
Gene Symbol: -
Assembly: GCA_027943255.1
Location: JAPTHQ010000132.1:3571988-3585964[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00028 0.039 15.7 3.4 1 23 255 277 255 277 0.98

2 11 0.025 3.6 9.6 10.4 1 23 283 305 283 305 0.96

3 11 0.00015 0.021 16.6 6.8 1 23 311 333 311 333 0.98

4 11 9.3e-05 0.013 17.2 1.6 1 23 339 361 339 361 0.95

5 11 3e-05 0.0042 18.8 0.5 1 23 367 389 367 389 0.97

6 11 2.9e-06 0.00041 22.0 0.1 1 23 395 417 395 417 0.98

7 11 0.00045 0.063 15.1 1.3 1 23 422 444 422 444 0.97

8 11 0.01 1.5 10.8 0.1 1 23 450 473 450 473 0.90

9 11 0.0022 0.31 12.9 0.1 3 23 539 559 537 559 0.97

10 11 0.021 2.9 9.9 2.7 1 23 674 696 674 696 0.95

11 11 0.006 0.85 11.5 4.9 5 23 709 727 701 727 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00028	0.039	15.7	3.4	1	23	255	277	255	277	0.98
2	11	0.025	3.6	9.6	10.4	1	23	283	305	283	305	0.96
3	11	0.00015	0.021	16.6	6.8	1	23	311	333	311	333	0.98
4	11	9.3e-05	0.013	17.2	1.6	1	23	339	361	339	361	0.95
5	11	3e-05	0.0042	18.8	0.5	1	23	367	389	367	389	0.97
6	11	2.9e-06	0.00041	22.0	0.1	1	23	395	417	395	417	0.98
7	11	0.00045	0.063	15.1	1.3	1	23	422	444	422	444	0.97
8	11	0.01	1.5	10.8	0.1	1	23	450	473	450	473	0.90
9	11	0.0022	0.31	12.9	0.1	3	23	539	559	537	559	0.97
10	11	0.021	2.9	9.9	2.7	1	23	674	696	674	696	0.95
11	11	0.006	0.85	11.5	4.9	5	23	709	727	701	727	0.92

Sequence Information

Coding Sequence: ATGTGTGCAGCACACAGTAACCCACAGCAGGGCTTCGGCTACACTTGGGGCTTCGCAGACAATACCCGTACGGAGTCCGTGTTGGAAATTCCGGCAAATATAAATTACACAGTCAGCAGCGAGTCCATGCCATATTTATTATCTACAGATGGGTCATTAACTGTACAGAAGGATGTAAAAGGTGGACTGGCGGCCCAGAAAGGGGGTGTTGTTCGTCGAATGTTTGTCGTGAATGAACCATTTGCACCAGGAGCACAACGAGTCATAACTGCAGGTACTACTACACCATCGGTGGTGAAGAAACAAGACCAACAAGTGCTCAGTATTAACTGCGACAAAAATTACCTACTTGTAGATCAATCAGATCAGTCACACTCTCTGACTAATGGTATCGTCGACACGAAGTCACAAACCATACTAACGACAACAGCTGGCGCTAAAACGCATTTCAGTCCCATCGGGCCGATCCATCTCACTGCAGAGGAATGCAACGAGATATTAATGAAACGAGCGCTTGCCGCATCTCAACAGACTCACACGATCACTACTCCAGACGGACATGGGACGACAAGTGACATTTTGCCGGGCATTTCGGTACAAGTTCAAAAAGTTATACAAGGCTTAGAAGAAACAGAAGATTCGCAAGGAGATGCGCCCAATTTAAAGTTAGAGCCTGGCACATTGGAACTTTCTCCCAAGACAGAGCTGCAGGATAATATGAACTATAACGAGAGTGATGCCACAGTAAAGAAGGAGCGCCCATACAGTTGCGATGAATGCGGCAAATCGTTTCTGCTGAAACATCATTTAACGACACATGCGAGGGTACATACAGGTGAACGGCCGCATGTGTGTGTGCATTGCAGCAAGAGCTTTGCTCATAAGCACTGCCTCAACACGCATCTGCTTTTGCATTCAACTGATCGACCCTTTCAATGCACCGAATGCAAGAAAAGTTTTACTTTGAAACACCACCTCTTGACACATTCACGTGTTCATAGTCGTGATCGGCCATTTGTATGCCCTGAATGTGGGCGCACGTTCCCTTTGAAGCGGCATTTAGTAACACATAGCAAATTTCATGCCGGTGAACGACCATACGTTTGTGAAGAATGCGGCGAAAGTTTTGCTCAGGAGAATCACTTAATAATGCATTCACGTTTTCATGGATCCTTGAATCCGTTTGTATGTCCGGATTGTGGTGCTACGTTTCCACGCAAATTCCAGTTGGTGAATCATGGCCGTATACACGGTAAGGTACCACACTCTTGTGCTTTGTGTGGCAAAGAGTTCTTGCAAAAGCGTACCCTGGTATCGCACATGAGGATTCATACTGGCGACCAGCCATATCCTTGCATTAGTTGTGGGGAAGGATTTATGTCAAAAGCCGAGCTCAATCAGCATGTACGCAATACGCACGGAGGCGTTAATCCAAACTCTTCGAACACTGCGATACATTCTTCGCAGCAGCAACATCATACGCAACAACAGCAGCAGCCACAGCAACAGACACAAGCGCCACATTCACAAACCATTACTGTTGTCGGTAATTCAGCGAACCCGGCATTATTAACCGTAGCAGGCAATGATAATGTTGCTCGTCCCCAATATGGATGTCGTGAATGTGGAAGTGCCTTTAATAGCAGAGAAGCGTTAGCGCTTCATTTGCGATTGCACACGGGTGACAAGAGCCTTATGACTGATTTGTGCGCTTTAACCGCGGCATTGCCTGGTCACTTCCTCAACACTGGCCTTAATCCAGGTACAGCCACTGTGGTGGCCACCAATCCAAATATAGTGGCTCAAAACACTGTACCAGTGCAGATAATTTCATCAACAGGTCAAGTTATGACCCAAACAACACTAGTGCAGGCCGCTGCCGCAACACATCCCCAGGGTGTTGTTACCAGTGTACCTGGCGTGATGCACCACCAGCAGCCGCAACAACAGTTGACAAACACAGCGCCACAGCAACATCATCCACAACAGCAGCAGCCAACGCCGCCCAAACCAAAGTCACACTTTTGCGCCAGTTGCGGCAAAGGTTTCGCGGCTAAGCATGGACTCATGCAGCATAATCGCCGACATCCCAATGGTGGTTGCACCGTGCGCACACATGTCTGCGAGTGTGGCAAGGCATTCTTCCAGAAGAATCATTTGATGTTACATCAGCGCCAACATTTGGAAACGAAGCCTCCATCTGCTGTAGCGCAACAGCAGCAGCAGCAGCAACAACAACAGCAACAACAACAACAGCAGCAGCAGCAACAACAGGTGCGTTGA
Protein Sequence: MCAAHSNPQQGFGYTWGFADNTRTESVLEIPANINYTVSSESMPYLLSTDGSLTVQKDVKGGLAAQKGGVVRRMFVVNEPFAPGAQRVITAGTTTPSVVKKQDQQVLSINCDKNYLLVDQSDQSHSLTNGIVDTKSQTILTTTAGAKTHFSPIGPIHLTAEECNEILMKRALAASQQTHTITTPDGHGTTSDILPGISVQVQKVIQGLEETEDSQGDAPNLKLEPGTLELSPKTELQDNMNYNESDATVKKERPYSCDECGKSFLLKHHLTTHARVHTGERPHVCVHCSKSFAHKHCLNTHLLLHSTDRPFQCTECKKSFTLKHHLLTHSRVHSRDRPFVCPECGRTFPLKRHLVTHSKFHAGERPYVCEECGESFAQENHLIMHSRFHGSLNPFVCPDCGATFPRKFQLVNHGRIHGKVPHSCALCGKEFLQKRTLVSHMRIHTGDQPYPCISCGEGFMSKAELNQHVRNTHGGVNPNSSNTAIHSSQQQHHTQQQQQPQQQTQAPHSQTITVVGNSANPALLTVAGNDNVARPQYGCRECGSAFNSREALALHLRLHTGDKSLMTDLCALTAALPGHFLNTGLNPGTATVVATNPNIVAQNTVPVQIISSTGQVMTQTTLVQAAAATHPQGVVTSVPGVMHHQQPQQQLTNTAPQQHHPQQQQPTPPKPKSHFCASCGKGFAAKHGLMQHNRRHPNGGCTVRTHVCECGKAFFQKNHLMLHQRQHLETKPPSAVAQQQQQQQQQQQQQQQQQQQQQVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00081531;
90% Identity: iTF_01045662;
80% Identity: iTF_00082334;