Aobl023226.2
Basic Information
- Insect
- Anastrepha obliqua
- Gene Symbol
- wek
- Assembly
- GCA_027943255.1
- Location
- JAPTHQ010000176.1:940499-947930[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.0041 0.57 12.1 4.0 1 23 297 320 297 320 0.97 2 16 0.0051 0.71 11.8 4.0 2 23 328 349 327 349 0.97 3 16 0.00048 0.067 15.0 0.2 2 23 359 381 358 381 0.94 4 16 0.00026 0.036 15.9 0.1 1 23 387 409 387 409 0.97 5 16 4.4e-06 0.00062 21.4 3.3 1 23 415 437 415 437 0.98 6 16 0.00075 0.11 14.4 0.9 1 23 442 464 442 464 0.96 7 16 5.5e-06 0.00077 21.1 2.2 1 23 470 492 470 492 0.97 8 16 0.036 5 9.1 3.8 1 23 498 521 498 521 0.97 9 16 0.0017 0.23 13.3 4.9 1 23 892 915 892 915 0.97 10 16 4.2e-05 0.0058 18.3 1.0 2 23 923 944 922 944 0.97 11 16 0.00091 0.13 14.1 0.6 1 23 953 976 953 976 0.94 12 16 7.1e-05 0.01 17.6 0.1 1 23 982 1004 982 1004 0.98 13 16 5.8e-06 0.00081 21.0 2.3 1 23 1010 1032 1010 1032 0.98 14 16 0.002 0.28 13.0 0.5 1 23 1037 1059 1037 1059 0.96 15 16 3.9e-06 0.00054 21.6 2.2 1 23 1065 1087 1065 1087 0.97 16 16 0.062 8.7 8.4 4.1 1 23 1093 1116 1093 1116 0.96
Sequence Information
- Coding Sequence
- ATGCAGACAGGAAACGCATCAGTCGGCGGAAAAGACTACAACTCCACTTCTACCTCCGCATCCGCATCCGCAGATTGGCACTATTGGTGTCGACTTTGCGCAAAGATTGATACACACAGTGAAAATATTTTCTATGAACATCAACCACAAATAACTTACTCGGGGGGCAAAAGTGACGATAATAGATGTACAATGGCCGTAGCAATAGGAAAATATTTTTGCGTACAAATAAAACACGATGACGATCTGCCCAAACTATTATGCACAGAGTGCATTTCATTGGTAACAACCCTTCTAGATTTTAATGAACGTGTTGTTAAAGTGCAAGAAATGTATGCTGAACTGCAAAGGGCTCAATTAATTAACGAAACAGATTTTCAGTCTATTCGACTAAAATATGGAATTTTGAAGGAAGATCCAGCTCAATTATGCAAGCTCCAACATGAAGAAGATTGTTTTACTGAAAAGATTGATGAAGCAAGTGTGGCAAACATGCACAATTTTGAAATCAAATTAATAACGGAAGTCTCAAGCGATGGTATCCAAACAGATGAAGTTAGTCATTCACTTGAATTTGAAGGCACGGAAGGTGAAGATCCATTTGCCAGCGGAGTTATCGTTGAGACCTCTGAAACCCAGACTCTTCGTGCAATAAAAGAATGTGATGGAGAAAGTAATGATGGTAAATTATCTGATTTCATACCTCTGAATGCAAAGAATAAGTTATTAAAATCCGAAATAAACACCAATGAAAAGGGAGGATCGTCAAAGAAAGATAAAAAAATGAAGTTAATGGATACTAATCTTAAACGATCTAACAAAAATAGTTTTGACAAAAAGTTAGAAAAGTTTATTACTAGCTCCGAGGTAAAGTCAACTGATGACAAATACTTTTGTAGCACCTGCTCCCTTCATTTCCAACGTCCTGGCAATTATCGTATACATATGAAGAAAAGACATGGAATGGCACTAGAACCTTTGACATGCTCTCAATGTCATAAATCTTTCAAGACAGTATTCGAATTGAATTTTCATATAAAAACACATCGCCCACTATCAGAGAAACGAATTCTTCCATGCCCACAATGTGACCGAAAATTTCAGACAAAAGGTTCTGTAGCCAGGCATATAAAGTTTGTTCATGAAGATATTCGTCCATTTATTTGTGAAGAATGTGGTGAAGGAACGAGAACCGAAACTACTCTGCGTGAACATATGCTTATACACACTGACCTGGCACCTTTTGAATGTGAAGTATGTAAGAAATGCTTCAAAAATCAGGCGCGTTTAAAGAATCATATGCAGATACACAGTTCCAGTAAGCACATCTGCAGAGAATGTGGCTTGCAATTAAATACTCGTGAAACTCTAAATCGTCATATGCTCGTACATTCTGATATTATGCGTCATAAGTGTGATTATTGTGGGCGAGCATTTAAACGAGCCAAAACGCTAAAAAGCCATTTAATACTCCATAGTGGTCTAAAGCCCTATACATGTGACTTTTGTGACAGAACCTTTGCTAATGGGGCCAATTGTCGTACTCACAAAAGGAAATCACATCCGGAAGAATTAGCGGCATTAGAGGCTTCAGGAGAAAAAACATACACGAAAAATATACCCAGACTGGCCGCATTAAAAACAGTAACAAAGCCTATTTGTACTGTTGGCACAAAGGACTCCAACTCGGTGATAAAGATAGATGGATCTGCTGAAACAGGACTTTCTGAAAGTAAAACAATGTTTAATACTAATGATTCAGACACAGGCAACTTTCCGAATGGAAAAGAAGGGCAAGCCATGCAAACAACAACGACATCAGTCGGCGAAAAAAGCTTGAACACCACCTCAGCATTCACAGATTGGCACTATTGGTGTCGACTTTGCGCAAAAATTGATACACACAGTGAAAATATTTTCTATGAACATCAACCACAAATAACTTACTCGGGGGGCAAAAGTGACGATAATAGATGTACAATGGCCGTAGCAATTGGAAAGTATTTTTGCGTGCAAATTAAACACGATGATGATCTGCCCAAATTATTATGCACAGAGTGCATTTCATTGGTGACAACCCTTCTAGATTTTAATCAACGTGTTGATAAAGTGCAAGAAATGTATGCTGCACTGCAAAGTGCTCAATTCAGTAACGATACAGATTTCCAGTCTATTCGACTAAAATATGGAATTTTGAAGGAAGATCCAGCTCAATTATACAAGCACCAACATCAAGAAGATTATTTTACTGAGACGATTGATCAAACAAATATGGCTAACATGCACAATTTTGAAGTTAAACTAATAAAAGAAATCTCGAAGGATGACATCCAAGACGATGAAGTTGACTATGCACAAGAACCTGAGGGAGCTGGAAATGATCCTTTTATCAGAAAAATTGGCGTAGAGACCGCTGAGGGCCAGCCATTTTGTGCAATAAAAGAATGTGATGAAGAAAGTAGTGACGGTAAACTTTCTAATTTCATAAATTCTAAAGAAAAACATAAGTTATTCAAAACCAAAATATTCATAAATGAAAAGGGAGAATCATCAAAGGAAGATAATAACTTAAAACTAATGGATGATAACCGTAAACGATCTGGCAAAAGTAGTCATAAGCAAAAGATCAAAAAGTGCGTTCCTGATGCCGAGGTAGGGTCAATTGATGACAAATACTTTTGTAGCGACTGCTCACTTCATTTTCAACGTCGTGGCAATTTTCGTGTACATATGAAGAAAAGACATGGAATGGCACTAGAACCTCTGACATGCTCACAATGTCCTAGAACCTTTAAGACTATATTTGATCTGAATTTGCATATAAAAACACATCGACCACTCTCTGAGAAGCGAATATTTCCATGTCCACAATGTGATCGAAAATTTCAGACAAAAGGTTATGTAGCGAAACATGTAAAGTTTGTTCATGAAGATATTCGTCCATTTATTTGTGAGGAATGTGGTGAAGGAACACGAACGGAAGCTACACTACGAGTACACATGCTTACACATACAGACCTGGCACCATTTGAATGCGAAATATGTAAGAAAGGTTTTAAAAATCGTACGCGCCTTAAGAAACATATGGACACGCACAGTTCTAAAAAGCACATCTGCAGTGAGTGTGGTTTAAAACTGAATTCTCGTGTGACTTTAAACTTACATATGCTCGTACATTCTGATGTTATGCGCCACAAATGTGACTACTGTGGGCGGGCTTTCAAACGTGCCAAAACGCTGAAAAATCATTTAATACTCCACAGTGGTCTAAAACCTTATTCATGCGATTTCTGCGATAAAACTTTTGCCAATGGGGCTAATTGTCGTACGCACAAAAAAAAAACTCATCCGGAGGAATTAGCAGCGTTAGAGGCTTCAGGCGAAAAAACACATACGAAAAATATACCAAAATTGGCTGTACTGAAAACTGTAACAAAATCAGCCGAAAATCTTATCCCAGTTGTCTCCAAACAGAGTGGCAATTTTTCTTTAGGTAGAAAGCCGAAACCTCCACTGGATTATACAGTTGACAGAAAACAGTCCAATTCGTTGACAGGAGTAGATGCGTCTGCTGAAACAGTGTTATCGGGGAGCCAAACATTTTTTAAAGAAAACAGTTTAGACATGACTAGTCTTACGGAGAGGAATAACATACCATCGTCGTTTTGGTAA
- Protein Sequence
- MQTGNASVGGKDYNSTSTSASASADWHYWCRLCAKIDTHSENIFYEHQPQITYSGGKSDDNRCTMAVAIGKYFCVQIKHDDDLPKLLCTECISLVTTLLDFNERVVKVQEMYAELQRAQLINETDFQSIRLKYGILKEDPAQLCKLQHEEDCFTEKIDEASVANMHNFEIKLITEVSSDGIQTDEVSHSLEFEGTEGEDPFASGVIVETSETQTLRAIKECDGESNDGKLSDFIPLNAKNKLLKSEINTNEKGGSSKKDKKMKLMDTNLKRSNKNSFDKKLEKFITSSEVKSTDDKYFCSTCSLHFQRPGNYRIHMKKRHGMALEPLTCSQCHKSFKTVFELNFHIKTHRPLSEKRILPCPQCDRKFQTKGSVARHIKFVHEDIRPFICEECGEGTRTETTLREHMLIHTDLAPFECEVCKKCFKNQARLKNHMQIHSSSKHICRECGLQLNTRETLNRHMLVHSDIMRHKCDYCGRAFKRAKTLKSHLILHSGLKPYTCDFCDRTFANGANCRTHKRKSHPEELAALEASGEKTYTKNIPRLAALKTVTKPICTVGTKDSNSVIKIDGSAETGLSESKTMFNTNDSDTGNFPNGKEGQAMQTTTTSVGEKSLNTTSAFTDWHYWCRLCAKIDTHSENIFYEHQPQITYSGGKSDDNRCTMAVAIGKYFCVQIKHDDDLPKLLCTECISLVTTLLDFNQRVDKVQEMYAALQSAQFSNDTDFQSIRLKYGILKEDPAQLYKHQHQEDYFTETIDQTNMANMHNFEVKLIKEISKDDIQDDEVDYAQEPEGAGNDPFIRKIGVETAEGQPFCAIKECDEESSDGKLSNFINSKEKHKLFKTKIFINEKGESSKEDNNLKLMDDNRKRSGKSSHKQKIKKCVPDAEVGSIDDKYFCSDCSLHFQRRGNFRVHMKKRHGMALEPLTCSQCPRTFKTIFDLNLHIKTHRPLSEKRIFPCPQCDRKFQTKGYVAKHVKFVHEDIRPFICEECGEGTRTEATLRVHMLTHTDLAPFECEICKKGFKNRTRLKKHMDTHSSKKHICSECGLKLNSRVTLNLHMLVHSDVMRHKCDYCGRAFKRAKTLKNHLILHSGLKPYSCDFCDKTFANGANCRTHKKKTHPEELAALEASGEKTHTKNIPKLAVLKTVTKSAENLIPVVSKQSGNFSLGRKPKPPLDYTVDRKQSNSLTGVDASAETVLSGSQTFFKENSLDMTSLTERNNIPSSFW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -