Aobl041909.2
Basic Information
- Insect
- Anastrepha obliqua
- Gene Symbol
- ZNF423
- Assembly
- GCA_027943255.1
- Location
- JAPTHQ010000158.1:336931-348876[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 0.0048 0.68 11.8 0.9 1 23 248 270 248 270 0.98 2 29 7.6e-05 0.011 17.5 3.6 1 23 276 298 276 298 0.98 3 29 0.094 13 7.8 2.0 1 23 844 866 844 866 0.98 4 29 0.047 6.5 8.7 2.0 1 23 872 894 872 894 0.96 5 29 0.12 17 7.4 0.0 2 23 928 949 927 949 0.97 6 29 0.00069 0.096 14.5 2.9 1 23 1021 1044 1021 1044 0.98 7 29 0.61 86 5.2 0.8 1 22 1051 1072 1051 1072 0.93 8 29 3.3e-06 0.00046 21.8 1.8 2 23 1122 1143 1121 1143 0.97 9 29 0.023 3.2 9.7 0.3 1 23 1150 1173 1150 1173 0.96 10 29 1.1 1.5e+02 4.5 3.4 2 23 1181 1202 1180 1202 0.95 11 29 2.3 3.2e+02 3.4 3.4 1 23 1285 1308 1285 1308 0.96 12 29 5.8 8.1e+02 2.2 2.3 1 21 1317 1337 1317 1338 0.91 13 29 0.48 68 5.6 1.5 1 23 1347 1370 1347 1370 0.96 14 29 0.00036 0.051 15.4 0.4 2 23 1386 1407 1385 1407 0.97 15 29 4.9e-05 0.0069 18.1 5.7 1 23 1414 1436 1414 1436 0.98 16 29 0.00033 0.046 15.5 0.9 1 23 1593 1616 1593 1616 0.96 17 29 0.0036 0.5 12.3 1.0 1 23 1653 1676 1653 1676 0.98 18 29 2.1e-05 0.003 19.3 1.3 1 23 1691 1713 1691 1713 0.97 19 29 5.9e-05 0.0083 17.9 1.3 1 23 1720 1742 1720 1742 0.98 20 29 0.023 3.2 9.7 0.2 2 21 1769 1788 1768 1789 0.95 21 29 0.0013 0.18 13.6 2.4 1 23 1837 1860 1837 1860 0.97 22 29 9.5 1.3e+03 1.5 0.6 2 22 1868 1888 1867 1888 0.93 23 29 0.17 24 7.0 1.2 1 23 1897 1920 1897 1920 0.96 24 29 0.00012 0.017 16.9 2.3 1 23 1951 1974 1951 1974 0.97 25 29 2.3e-05 0.0033 19.1 0.2 2 23 2009 2030 2008 2030 0.95 26 29 0.0001 0.015 17.1 2.3 1 23 2036 2058 2036 2058 0.99 27 29 6e-06 0.00084 21.0 6.4 1 23 2064 2086 2064 2086 0.98 28 29 1.9e-06 0.00027 22.5 1.4 1 23 2092 2114 2092 2114 0.99 29 29 0.0046 0.64 11.9 0.1 1 22 2120 2141 2120 2144 0.90
Sequence Information
- Coding Sequence
- ATGGTTTCATACCAATGTCGTACATGTCGTGAGACAAATGTTGGCAACTTCTACTCATTAGCAGAACTTTTGGATGAGGAGCGCTACCCAAAGAAAACACTAGGAGACTTTCTATGGGACATCGCAAAAATTAACAATAAGAGCGAGGATGCTCGGCGTCTGCCCCAGCAAATTTGCGGAGGGTGCTCAAGGAAACTTAAAAATACCTATTCTTTTGTGTTACAAGCACAGGTGGCAAATAAAAAGTTATTTGCTAGTTTATATGTCGAAAGCCTTACCTCTAACGCTGGTAAAGACCTGGCAGGCAAAAACAATGATTGTCTTTTGGAGGCTCCTATTGATATACCAATGCGACAAACGGAAATTAAAAAAGAAGCTGATTTCGTAGGCGAGGAAGTTACTGAATGCAGTGAAGACTTAACCGACATAAATACAAACGAATGTGATAGGGAAGGAAAAAGTAGCAATGAAGTTGTTCAATTCGTAAAGGAAGAAATGCAAATTGATTTGAATCCGGATGAACCGGATGCTGAGAGTGTTAGCACAGAAGAAAGCATAGGACTCGATCCTATAACCACCGTGGAAACTACCTGGCACAGTGAGAAGACAGGAAATGATTTGTTTGAAAATCGGAGTGACCTAGACACTAGCAAGAGTGAAACTCCTCCTTTAAAACGACGTCGTGGAAGACCACAATCTGCGATTACATTTGAATATACCTTCTGTGAAGGAGATGGTAGATATTATTGCAATAAATGCGAGAAGAATTTTGCCTGGAAAAAAGATGCAGAACGCCATATGAAAATACATTTAGGAATTTTTCCATATGAATGCGCACAATGCAATAAACGTTTTCAGCGAAAGGATAAATTTAACAAACACATGAAGTTGCATTCCAAACAAGAAATCGCGATTAGTACAGccatgtctcctccaaagaaatctcCCGCGGCTAAGAAAACCGATAATAATGTGGTACTGCAAGCCATCAAATCTTGCATTATCGATGAAAATGCAATCCGTAAAAGTGCGAGAGAGCATGGTATAAACGACAGGACCTTATCGCGATACGTACAGAAAACGAAAGATAATTTTGAAGATATTTCGAAAGTGAAAGATGAGGATTTGTTGGAATTCATTCGTGTTGTTGGTACAAGAACTCCATCAAACATGGTTTTCTCTCCAGCTCAAGAAAAAGATCTCGTTGGATACATCGTGAAGTGTGTCACTCACTACTATGGTTTGAGCATCAATGAATTGAAAGAGCTGGCGTACCAGTTTGCAAGGAAGCTGTCTCTTAGGTACCCACCTGAATGGGATAACGATTGTAAAGCGCATCGTAAGTGGTACAGCCTCTTCATGCAACGGCATAGCGAACTGACGCTCAGAACACCGGAGCAAACATCCATGAACCGAGTCAAAGCTTTCTGCAAACCGAATGTAGACAAGTTTTTCGCAAATTTGTCTCGGTTAATCGATGTACACAACTTTGACAATTGTTCCATCTATAATATGGATGAAAGTGGGTTTTCCACTGTGCCAACAAAAATTGGAAAAGTCATCGCTATGAAAGGTGTGCGGCGTGTGGGAAAACTAGAATCTGCCGAGCGAGGAACCATGGTGACAATGGCTCTCACTGTTGGTGCGAATGGCGATTCAGTCCCGCCGTTCTTTTTATTTCCAAGAAAGAACATGCAATCAACTTTTTTGGACAATGTTTCTCCTGGTACTGCTGGATTTGCGAATGATTCTGGCTGGATGTGCCAGCCAGAGTTTGTCCGATACATTCGTCATTTCATCATGTTCGTGAAACCATCAAAGTATCATCCGGTGCTGCTGTTGATGGACAACCACGTTTCGCACATGTCGGTGGAAGCTCTCGACATTGCAGCTGCAAACGGTGTCCATATCTTGTCTTTCCCGCCTCACTGCAGCCACCGTCTACAGCCACTGGATGTGTCCGTATTTGGCCCAGTGAAGACTTACTATAAGTCACAATGTTCCGCTTGGCAAAATAACAATGCAAATAAGGTTTTGGAAATTCGACACATTGCTGGGCTTGTGTGCGCTACATTGGATTTGGCTTTAACGCCAAAAATAATTAAGGCGGgctttgctgcaacgggcattgctccattcaatcccgacatcttcacagacgccgattttgttcaagctgttgcacaaaatgaggaacaagttgcttttgatgctggaatcaccgaagatgaccagcgacgcatcgttttggataatactatggatataggacgcggagaagagACAACCCAATATTTTTTCAACGAGTTTTACAAACCTAAGAACAATACTTTTTATACAGGAGATGGCCTGCTAAACGTAGAATCAAGTTTGCAACTGGAAATAGAAGAGATTGAAACGAGTGACGATCAAAGCGAGGAAGACAGTGCTGAGCCCGCTTCGTCATCTGTACTCCCATCGAAGCGACGACGTGGTAGAACAGTGTCTACAAAAAAATTGGAATTCACATTTTGCAACGATGACGGACGTTATCACTGTAATAGGTGTGATAAAGACTTTGCTTGGAAGAAAGATATTGAACGCCATGTAAAAAGTCATTTTGGCATTTTTCCATATGAGTGCATCAAGTGCAATCAACGTTTCCAGCGAAAGGACAAGTTCGCAGAACACTTGAAGAGCCATACAAGTCGTGAAGCAGGAACTAAACGGCCACGTTCAACACTGCGCGCAGAGTGGAACTTCGCGGAACGTCTTTATACAGATCTGCACTTCCGCTCGATCGAATGCAAACTCTGCACCGAAGCTATTCCGAACATAGGCGCATTACGACAGCACTTGCAAACTCATTATAAACCCGAAACTTTGTGTTTAGATGTTGAAGGTGAAGTAGTTAAAGAGCTGTTTCCTAATTCTAATTGCGATATAGGCAAAATTAAGGCGCAGATATGCAAAGACATTAAAGATCAGCGCTATGCGAAATATTATGCCATTGTTAATGCGTACGGTTATGAAATGGCGCTTAGCGATTCTGATTCAGAGTCCAATACGAGTGAGACTAAGTACGAATGTGAATTGTGTCATGCAAAGTTTGCGCGCAAGTATCAATTATTTCAACATTCCAAGACAGAACATGCAGAAGAGAAATTGCCACATAAGTGCAACGTTTGCAAGTTGGAATTCGTTAGCGGAAAAATGTTTGAGTTACATTCACGCACCCAATGCAGAAATCGGGACAGAAAATATCAATGTCTCAAATGTCCGGGCAAGTTCGTGTGGTTACATAATCTTCAAGGGCACAAGTGCTCCAATCGCTTGAATGTGTATGTGCCCAAATGGCCAGATAAACGCAAACTCCATTTACTGCAGTGCAATTTTTGCGATAAAACATTCCGTTATGCAACCGACTTGAAGCGCCATCAAGAGACGCACAGCTTGAACAGCCGTTCCCATGTGTGCGCTATATGCAGTCAACCTTTTTTGAAGGCCGAGAATTTGCGTCAACATTTGCGGCAGGCTCACGACCAGATAAAACGTCGTATTGAATGCTGCCTATGTAGCGAAAAACTGAAAACCCTAGCTCAGCTGCGTACTCATTTGTCTCATCATTCGGATGGTTGGACGGATATCAGGTACACAGAGGGGAAGTATTTTAAGGTACATTGGCCGCAAGGTTGCCGGGGAAAAGAGGCGGAATTGGAACAGAGTATTGTGATCGATTTTGCCGGACAGAATTTGACGAATTATTACTCAGCTATGGATGAGAGTGGCAACGAGCTGGATTTAAATGACTCGGAGACGGATCTGGAATTAGAAAGTGGTAACGCACCCAGTGAACAACTTTCAACTACTTCCTACACTTGCGACTTGTGCGCCGAAGTATTTTTCAGGAGAAAACGCATTCTACATCATCAACACAGTGCACATGCGGAAGAGAAGCAACCATTTCCTCATGCTTGTAATCGTTGTGAAAAACGATATGTTTGCTCGGGCTTATTGGAACAACACTACAAACGCGATTGTGGTAACATTTATAAGCGTTTCGACTGCCAACGCTGTTCAGCGCGTTTTGTGTGGGAGGAAAATCTGCACCAACATATGCAACGCCAGCACATTGACCCGGAACAGCAAATAAGTCGTCAGCTTGCCAATAAACTGCAATGTGACCAATGCAATAAAGTGTTTGTTTGGCCAAAGGATCTAACGCGGCACAAGCGCATACACATGCCAGATGACGAGAAGTTCGAATGTCCATACTGCGAGCGCAAATTCTATCGGAAAGACCATTTACATACGCATCTGAAAGTGCACGGTGCTAGCGGCAACATGGCAGCAGCGACTACAACAGCAGCGGCTAGTAAGCGCGAGTTAAATCGTAAGGTGAATGCTGTGGATCCGCACCTTTGCAAACCGAACGGCTGCAAATGTGTGCAATGCAAAATCTGTCTCTCCAAGCATACAAAAATAGCCGATCTGCGTGCTCATCTGCTAGAGCATCGTACAGACGTCTCTTTGTCACAACACGTCACAACTGATTGGGAAATATCTATACTTTTCTATCCCGACGAGGCGCCGATGACCAAGGAGATGCTGATGTCACGCATGAAAGCAGATATAAATGCCGGCCAGCTAGACCGATTTTACTCGATCACAAATGAATTGGGGCATGAGTTAAGTATTAGCGGCTCTGATACTGATGATACCGATTCGGATTCGGAACCTGACGAAGCATTGCATAATGTGACAGGCAATATTATACGCCACCCAAGACGCTCAACGTACAATTGCGATTTGTGCAGCGTCACATTTACGCGGAAGTATAAACTTTTTGCGCATCAAGCGAGTGAGCACAGTTGGGATGAAGCGCCGCATGTATGCCAGCATTGCCAAGCGCACTTCTTGTGCGACAAGCTGTTGCAGTCGCATTACCGCCACCAGTGCAAGAATTTGCTAAAGCGTTACGTATGCCGCAAATGCCCACAACGCTTTATGTGGAAGGAGAATCTTAAATTGCATTTGCGCACAATGCATCCTGATAGTGAGGAAGTGAAAAAGGTTTTCGCACCCAGTTCATTTGATTGTGAGGAATGCTCAAGAAGCTTCCAGATGCAGAAGGATCTAACTCGCCATATGATGACACATCGCGCTGATGCCACCGTTTTTCCATGCCTCTGGTGTCCACGCAAATTTTACCGTAGAAGCAATTTGTATTTGCACATTAAGCGACATGGCATAACATCACATCAGTTGAGTGCAGCTGCATCTCATATAACTGCCACCAAGGGGCCAAATGGAAAGAAGGAAATCAAGTGTCGAGTATGCAATGTAGATTTCAATAGTATGTCTGCTCTACGCACTCATTTGCGCCAAGAGACATCCACGATGCTTTCGACCCATCACAATTACAATTCTCAGCAGAATTATTCAATTTTGAATGAGTTTGGATACGAATTGGATATTGATGATTCGGAGACAGATGAGGATGACAACGAAAAAATTCCAGCGAAGGCATACAAGTGCCAAATGTGTGGGTTGGTTTGCAAGCGGCGGTATGAGATGAGCCAGCATCAGTTATCGGTGCACAAGCATGAACATATAACGCTGAAATGTGACAAGTGCGTGTTTAGAACGGTTTCGAGTGATATCATGGAACATCATATGCGTACACAATGCAATAACACCGAAAAACTGCACCAATGCACGCAGTGCTCATATAAATTCATGTGGCCTGAAAATTTGGATATGCATATGAAATTGGTGCATCCACCATTGCCAGACGAGACGCTGACAAGTTCAGCCGCTTTAAATGAGGCCGTTTCCTCGGGCCGTATAGAGCCCGTGCCGCCTCAGGTATTCAATTGCGATAAATGCGATCGTCGATATAATCGCAAAGACCGCCTATTCGCACACATTAGAAAGATGCATGGCCCAGACAGTGATGCGCCTAGTTGTAGCATTAATGCAGCTAATCTGGCTTCAAGTATGTCAGCGAATGCCAAAAAAACCGGACCGAAAGAGAAAAAATTTCTCTGCGCATTTTGCGGTCGCGCTGTGAGTTCATCATCTAACTTGATTGTTCATATGCGACGCCACACTGGTGAAAAGCCTTTTCAATGTGAATTCTGCGATAAAGCGTTTCCCCGTTCCTCAGATTTAGCTTGTCACCGCCGTACCCACACAGGCGAAAAACCGCATCGTTGCACTGTTTGTGACAAATCCTTTTCACGCTCATACAAGTTGCACACACACATGCGCATACATTCTGGTGAAAGGCCGTACAAGTGCTCCTATTGTGAGAAGAGTTTTACTCAGTCTAATGATCTTGCACTGCATGTTCGCCGGCACACTGGCGAACGGCCGTATGTGTGTAATGTTTGCGGTGAAGGCTTCATTCAAGGAACGGCGTTGAAGAATCATCGTACTATTCGGGGACATTTCGAAACCGAAGAAATGCAGGACATTTCGATGGAAGAAGAACAAGCAAGTAGCATGTTGCAATTGGACGAGCAGGGTAACAGTCTAATACAGCTGTAA
- Protein Sequence
- MVSYQCRTCRETNVGNFYSLAELLDEERYPKKTLGDFLWDIAKINNKSEDARRLPQQICGGCSRKLKNTYSFVLQAQVANKKLFASLYVESLTSNAGKDLAGKNNDCLLEAPIDIPMRQTEIKKEADFVGEEVTECSEDLTDINTNECDREGKSSNEVVQFVKEEMQIDLNPDEPDAESVSTEESIGLDPITTVETTWHSEKTGNDLFENRSDLDTSKSETPPLKRRRGRPQSAITFEYTFCEGDGRYYCNKCEKNFAWKKDAERHMKIHLGIFPYECAQCNKRFQRKDKFNKHMKLHSKQEIAISTAMSPPKKSPAAKKTDNNVVLQAIKSCIIDENAIRKSAREHGINDRTLSRYVQKTKDNFEDISKVKDEDLLEFIRVVGTRTPSNMVFSPAQEKDLVGYIVKCVTHYYGLSINELKELAYQFARKLSLRYPPEWDNDCKAHRKWYSLFMQRHSELTLRTPEQTSMNRVKAFCKPNVDKFFANLSRLIDVHNFDNCSIYNMDESGFSTVPTKIGKVIAMKGVRRVGKLESAERGTMVTMALTVGANGDSVPPFFLFPRKNMQSTFLDNVSPGTAGFANDSGWMCQPEFVRYIRHFIMFVKPSKYHPVLLLMDNHVSHMSVEALDIAAANGVHILSFPPHCSHRLQPLDVSVFGPVKTYYKSQCSAWQNNNANKVLEIRHIAGLVCATLDLALTPKIIKAGFAATGIAPFNPDIFTDADFVQAVAQNEEQVAFDAGITEDDQRRIVLDNTMDIGRGEETTQYFFNEFYKPKNNTFYTGDGLLNVESSLQLEIEEIETSDDQSEEDSAEPASSSVLPSKRRRGRTVSTKKLEFTFCNDDGRYHCNRCDKDFAWKKDIERHVKSHFGIFPYECIKCNQRFQRKDKFAEHLKSHTSREAGTKRPRSTLRAEWNFAERLYTDLHFRSIECKLCTEAIPNIGALRQHLQTHYKPETLCLDVEGEVVKELFPNSNCDIGKIKAQICKDIKDQRYAKYYAIVNAYGYEMALSDSDSESNTSETKYECELCHAKFARKYQLFQHSKTEHAEEKLPHKCNVCKLEFVSGKMFELHSRTQCRNRDRKYQCLKCPGKFVWLHNLQGHKCSNRLNVYVPKWPDKRKLHLLQCNFCDKTFRYATDLKRHQETHSLNSRSHVCAICSQPFLKAENLRQHLRQAHDQIKRRIECCLCSEKLKTLAQLRTHLSHHSDGWTDIRYTEGKYFKVHWPQGCRGKEAELEQSIVIDFAGQNLTNYYSAMDESGNELDLNDSETDLELESGNAPSEQLSTTSYTCDLCAEVFFRRKRILHHQHSAHAEEKQPFPHACNRCEKRYVCSGLLEQHYKRDCGNIYKRFDCQRCSARFVWEENLHQHMQRQHIDPEQQISRQLANKLQCDQCNKVFVWPKDLTRHKRIHMPDDEKFECPYCERKFYRKDHLHTHLKVHGASGNMAAATTTAAASKRELNRKVNAVDPHLCKPNGCKCVQCKICLSKHTKIADLRAHLLEHRTDVSLSQHVTTDWEISILFYPDEAPMTKEMLMSRMKADINAGQLDRFYSITNELGHELSISGSDTDDTDSDSEPDEALHNVTGNIIRHPRRSTYNCDLCSVTFTRKYKLFAHQASEHSWDEAPHVCQHCQAHFLCDKLLQSHYRHQCKNLLKRYVCRKCPQRFMWKENLKLHLRTMHPDSEEVKKVFAPSSFDCEECSRSFQMQKDLTRHMMTHRADATVFPCLWCPRKFYRRSNLYLHIKRHGITSHQLSAAASHITATKGPNGKKEIKCRVCNVDFNSMSALRTHLRQETSTMLSTHHNYNSQQNYSILNEFGYELDIDDSETDEDDNEKIPAKAYKCQMCGLVCKRRYEMSQHQLSVHKHEHITLKCDKCVFRTVSSDIMEHHMRTQCNNTEKLHQCTQCSYKFMWPENLDMHMKLVHPPLPDETLTSSAALNEAVSSGRIEPVPPQVFNCDKCDRRYNRKDRLFAHIRKMHGPDSDAPSCSINAANLASSMSANAKKTGPKEKKFLCAFCGRAVSSSSNLIVHMRRHTGEKPFQCEFCDKAFPRSSDLACHRRTHTGEKPHRCTVCDKSFSRSYKLHTHMRIHSGERPYKCSYCEKSFTQSNDLALHVRRHTGERPYVCNVCGEGFIQGTALKNHRTIRGHFETEEMQDISMEEEQASSMLQLDEQGNSLIQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00081501;
- 90% Identity
- iTF_00081501;
- 80% Identity
- -