Basic Information

Gene Symbol
Mblk-1_1
Assembly
GCA_027943255.1
Location
JAPTHQ010000237.1:1894387-1899158[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.046 83 4.4 0.4 5 20 380 395 379 396 0.86
2 2 5.3e-18 9.6e-15 55.4 0.0 1 43 565 608 565 610 0.95

Sequence Information

Coding Sequence
ATGGAATTCGAAAATATTGCCGTCAACTTTTTTGGTCACAAAGGGAGTACGAAAACATCACGGACCACGCCCACACTCTCTGCACGCCGCCCCTACAACGATGACGTGCTAAGCAGCGCCGTACAAGGTCTTCTAAGTGGAAAATACAGCGCAAATACCCGCAAACCACCAGACCAATACAGTAGCAGTGCGACATCGAGCACCATACGTACAAGATGTAATCGCCCTGCGATGGGCGGCAAACGCCTCAACGCCCACCTTACAAATGCTCTATTGCAGGGTTTAGAAATGGACAAGGATTTGTCGGGTGATGAATGCAACGCTGCTGATGCTAGCACGCTCATGACTGGTGGTCATGGGAGTAACGCTTCAACACCACAACCAGAACCCGCCACACATTCAGCACTCGAAGAGCTCGCCAATCGTCTAAGCGCCACGCATTCGATACGGAAGCTGTGCGTAAATAATGGCAGCAGCGATGCGGCGAGGCGCGAAAGCGACATTGAAGCTGCAAACTGCGCCGTATTGTCACCCAAGCCGAATGCATTGTATATAGATGCGGCTAAGCGTGATACTGGTACACCTTCGAGCAGTGCTACGCCGCAACCGCAGCAATCACCGCAGGCAGGACTTGATACAACTTTTGCAATTTTGCAGGCGTTTTTGTTTACTCTCACCAGCTTTGGCGCTTTGCAACAGCGTGCAGACCAGCCCATAACACTGCGTGATCTTGTAGCCAATTTGAAAGATATGTTGGAAGCGCATACAACGGGTGATTTGAATGTGGAAGGTCTTATCAATAATGGAAAGCCCAATATAATGGATCAGCCATTGTTGTTGCAGAAGCTGCAGCAGCAGACCTCAGCATATGCGGCGCAACGCTTGCCCAAATCAGATACTCCAGAGACGACAAGTTCAATTGACACGCACGAACCGATTGGTGAGGATCTAGCTTCGTCGATTCTTAAGATTCCGTCCTATAAGCCCGCGGCAAGCACGCCCACTCCAACATCGGGTGCAGCACGCACCTCCTGCTCCCCATCTTTGCTGTGCAACAACTCCAACGCCAATTCAATGCCAAATCCTAATGGCGATAGCCCCCATTCAGCGCCCTCCCCATGTATCGCCAGCTCAATGTTGGCCGCTGCAGTGGCGGCTGTGAGCAACAATGGCACCTCGACTTCTGCCGGCCGTCAGGGCAACGACCTCTCAGTGATTTCGCCCCCGTTGCTACAACACCGCCAATCACCACCGTCGTTCAGCTTTCGTGATGTGATCGCGCGAGGCATCCACCGCACTATGAATGAGCAAGCGAACCAAGAAGCACATGCGGCAGCAGCTGCTGTTGCCGCAGCCTCAGCACCTATGCTCGGCTTGTGTTTAGAAATGGAGCGCTCAGCCAATAACAACAGCGGTGGCAGTGCAGATTACAAGAAACCAACCATTTCAGTCGTGAAGAATATAGGCGGTACTGATACAACTCGTTTTGGCGCTGCGCCCAATCTATTGGCTGGCACCAGTGCGGCTGGCGCGCCTGGTAGTAGCTCCAGCGCGCACAACTCGCACGGCTACCACCAGTCGCATTTGCATAATGCCCATCACCATCACTCGCACCACCTTAGCCGCCAAGATGCCGCAGCACTTGCCGCGGGCAAAGGTACCCGACCCAAACGTGGCAAGTATCGCAACTACGACCGAGATAGTTTAATTGAAGCAGTGCGCGCTGTACAGCGTGGCGAAATGTCGGTGCACCGTGCAGGCAGCTACTTTGGCGTGCCGCACTCCACGCTCGAGTACAAAGTTAAGGAGCGGCACTTAATGCGACCACGCAAGCGTGAGCCCAAGCCCCAGCCTGGTCTGGATGGCAGCAGCTCGACCTCGGCCAAATCAAACTCCAACATTCCTGGTCACCACAATAATCTTAGTAAAATGAAACTGGGCGGCGCTGGCAGTGGCAGCTCAAATTCCAAGCTAAACGAAACACTTAAGGGCAACAGCAACTCGGCATCGGCAGCGTTCCCCCCCACAGCACCAAATGGCATGAAATTGCCCATTTTCGATCCCATGCAATATCCGGGGCATCTATTTTGGAATCATTCCCCAGCTTTTAGTCCAATGCACATGGAATTCAATCGCAATACAGTGGCGGCGCAAAATGCAAGCGCTGCACAACGCTACACTGAAGAAGCGCTGCGTGGTGGCGCATCGGCAGGTACGCCATCCAATGCTAACAGCCCCAGTCCTATAGCCAGTCCGCTATCCGCTGCCGCAGGTCATGCGCTCAATATGAAGAGTGCGCGCGAAATTGCTGAGAATTTATATGAAAGTGGCGGCGCTAATGGTTCCTCAATACTCGACGGCATCATACGAAAGACGCTCGATCGCAAGAGTGCCGATGTTGGCCCGCCACCCAGCGTTCCCACCGGTGGAGCATTACTGGATCAATTGCTGGTCAAGAAAAGTGCGCCTCCACCGTACGTTAGCAACAACATCAACGATCATGTCTCAGCCTCGGCTATGAGTTTAGGTACCAAACGCGCCGGCAGTCCGTTGCCCTATACGGAAATTAAGCGCGAACGTGGCAGCCCGCAACATAGCAGTGGCGACGACGATGATGACGACGCCTCACGCAGTGGCACTGAGGAGATGAGCTACGAGCATAATAACAACAACAACAGCAAGAGTAGTTTCAGCGGCAATAATGAATTGCTACTACAGCATCAGCACTTGCACCAGCAACAACGCAGTCGTAGCCGCAGCCGACTAACCTCACACGACTCCGCCGAAACCGATACGAGTAGTATACCCAGCGATCTCATGCCAAATCACAGCAACAGCAGTAAACTAGTTGCGGATCTAAATGGAAGTGGGGGCAGTGCGGGAATGAGTGGGTTGGTGCCCAAAGTGGAACCACTGCTGGAATTAGGGCGGGTGCCACCGGCTTTAGGTGGGACCTCAATACTACAGGAAAAGTTAGCGCAAATCAAGGCAGAACAAGAAAATGAAGAAAATTTATAG
Protein Sequence
MEFENIAVNFFGHKGSTKTSRTTPTLSARRPYNDDVLSSAVQGLLSGKYSANTRKPPDQYSSSATSSTIRTRCNRPAMGGKRLNAHLTNALLQGLEMDKDLSGDECNAADASTLMTGGHGSNASTPQPEPATHSALEELANRLSATHSIRKLCVNNGSSDAARRESDIEAANCAVLSPKPNALYIDAAKRDTGTPSSSATPQPQQSPQAGLDTTFAILQAFLFTLTSFGALQQRADQPITLRDLVANLKDMLEAHTTGDLNVEGLINNGKPNIMDQPLLLQKLQQQTSAYAAQRLPKSDTPETTSSIDTHEPIGEDLASSILKIPSYKPAASTPTPTSGAARTSCSPSLLCNNSNANSMPNPNGDSPHSAPSPCIASSMLAAAVAAVSNNGTSTSAGRQGNDLSVISPPLLQHRQSPPSFSFRDVIARGIHRTMNEQANQEAHAAAAAVAAASAPMLGLCLEMERSANNNSGGSADYKKPTISVVKNIGGTDTTRFGAAPNLLAGTSAAGAPGSSSSAHNSHGYHQSHLHNAHHHHSHHLSRQDAAALAAGKGTRPKRGKYRNYDRDSLIEAVRAVQRGEMSVHRAGSYFGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGSSSTSAKSNSNIPGHHNNLSKMKLGGAGSGSSNSKLNETLKGNSNSASAAFPPTAPNGMKLPIFDPMQYPGHLFWNHSPAFSPMHMEFNRNTVAAQNASAAQRYTEEALRGGASAGTPSNANSPSPIASPLSAAAGHALNMKSAREIAENLYESGGANGSSILDGIIRKTLDRKSADVGPPPSVPTGGALLDQLLVKKSAPPPYVSNNINDHVSASAMSLGTKRAGSPLPYTEIKRERGSPQHSSGDDDDDDASRSGTEEMSYEHNNNNNSKSSFSGNNELLLQHQHLHQQQRSRSRSRLTSHDSAETDTSSIPSDLMPNHSNSSKLVADLNGSGGSAGMSGLVPKVEPLLELGRVPPALGGTSILQEKLAQIKAEQENEENL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00091092;
90% Identity
iTF_00081118;
80% Identity
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