Basic Information

Insect: Anastrepha ludens
Gene Symbol: RREB1
Assembly: GCA_028408465.1
Location: JAPVRI010149247.1:1-4712[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 5.1 8.7e+02 2.2 2.9 2 19 148 165 148 167 0.94

2 11 0.0049 0.83 11.7 0.4 2 21 181 200 180 201 0.94

3 11 0.0076 1.3 11.1 0.1 1 23 368 390 368 390 0.97

4 11 2.1e-05 0.0035 19.1 1.3 1 23 400 422 400 422 0.99

5 11 0.00056 0.095 14.6 2.2 1 23 428 451 428 451 0.97

6 11 0.0027 0.46 12.5 2.0 1 23 762 785 762 785 0.95

7 11 7.8e-05 0.013 17.3 0.3 2 23 1143 1164 1142 1164 0.97

8 11 0.13 22 7.2 6.3 1 23 1170 1193 1170 1193 0.97

9 11 2.8 4.7e+02 3.0 5.0 1 23 1308 1331 1308 1331 0.97

10 11 0.0077 1.3 11.1 0.5 3 23 1387 1407 1385 1407 0.96

11 11 0.0012 0.21 13.6 4.8 1 23 1413 1435 1413 1435 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	5.1	8.7e+02	2.2	2.9	2	19	148	165	148	167	0.94
2	11	0.0049	0.83	11.7	0.4	2	21	181	200	180	201	0.94
3	11	0.0076	1.3	11.1	0.1	1	23	368	390	368	390	0.97
4	11	2.1e-05	0.0035	19.1	1.3	1	23	400	422	400	422	0.99
5	11	0.00056	0.095	14.6	2.2	1	23	428	451	428	451	0.97
6	11	0.0027	0.46	12.5	2.0	1	23	762	785	762	785	0.95
7	11	7.8e-05	0.013	17.3	0.3	2	23	1143	1164	1142	1164	0.97
8	11	0.13	22	7.2	6.3	1	23	1170	1193	1170	1193	0.97
9	11	2.8	4.7e+02	3.0	5.0	1	23	1308	1331	1308	1331	0.97
10	11	0.0077	1.3	11.1	0.5	3	23	1387	1407	1385	1407	0.96
11	11	0.0012	0.21	13.6	4.8	1	23	1413	1435	1413	1435	0.99

Sequence Information

Coding Sequence: aacaacaaaaataataacagcgACAACATTAACAATAATGCcgccaacaataacaataaaaataacaacgcAAATCGAAATAGTTTAGATAATTTTAAGCGTAAATTCAGTGATCTACACGATGAAGCCGACGTTGAGGCTGACGACACGACAATGATGTTAGCGTTGAAGCGACGCATGAAGACCACAATAAACAATAACGTCATCGGCGAGGATTTGCATGCAGTTGGTGCTCCTGTCGACCATAAAAATGAAGGCGACGCAGTCGTAaccaaaaaaatgcatacatccTCTTCTGCATCGGCGGCGTCAGATGATGACGATGGTGAGCATAAGCCACACTTCCAGTACCCGGTTTGTCCTGTCTGCAATGCTGACGAATTTGCGAATATGAACGCTTTGGACCACCATCTGGAGACTGTACATGCTGATATACCAGCGAAGTGTCGCCTCTGCGCGGTGGTGTTCCGCAAACACAGTCAACTGAGCATGCATTTCTGTCCACAGAGTATGCCCGGTAACGATCAACTGCCGCTGAAGGAGTGCGTGAAGTGTCGTCGCAGCTTTCCCAATAGCAAGGATTTAGAGTTGCACACACGTGAATGCGACTCTGCCGTGGTGCGACATAAGCGGCGCAGTCGCAGCCTTAGCGATAGCTACACGGTGCCGCCTCTGTCGGAAACCGAAATCGAGGAGAAAACGAGTCTGGCACGCAACAACTTTTTTCGTCAGCTCTATTTGCAAAGTCAAAAACCTTTCTGCGCACAGAGTATGATCTCACTGCCCTCGCCTCTGCACTCGGCTAACGAGGAGGGAGATGCGGGTAATGCAAGCAACACTGATATCAAACAAGAAGCAGATACTGAGCCGATAGATCAATTGTCGAGTAACTTGCTCTCACAACAATCGCACGACTCGAAAGATTTGGCCGATATCCAATCTATACTCAATATGACTTCGTCATCGTCCACATCGAATTTTCTGAAGAACTTTGAGCAATCGGTGAACACACCTTCCAGCAATTACAGTTTGGATAAAGACGAGGAGGAGGCACAAGATGCGTTTACATCTGAGTTCCGTAAAATGAAATTGCGTGGTGAGTTCCCGTGCAAACTTTGCACCGCAGTCTTTCCGAATTTGCGCGCGCTAAAGGGCCACAATCGCGTGCACTTGGGTGCTGTAGGTCCGGCGGGACCGTTTCGCTGCAACATGTGCCCTTATACGATATGTGATAAGGCTGCGCTTGTGCGTCACATGCGCACGCACAATGGCGATCGTCCCTACGAATGTGCAGAGTGCAATTATGCCTTCACCACAAAGGCCAATTGCGAACGCCATCTGCGCAATAGACATGCGAAGACTACACGGGAGGAAGTGAAGCGTGCCATCATTTACCATCCATCCGAAGACTCAACCTGCGAAGATCCCGCAAAAAAACTGCACATGTTCTCCTCGCCCGACTTTGATGATGACATGGAGTTGCAATATCAGCAACATCATCCCAAAGATCGTTCCACACCCGTATCGCACCTTAAGGAAATGTTAACTGGCGAAAGCCCGTCAGCGAAGCCAATGAAGATACAGGTTAAAAGTTTGGAGCAATTACTTGATAAGTCCACCGGTTCAGTCGGTAGCTACAATGAGTCTTATGAAGAACGCCCTGCGCCACACAGCATGCAACATTTGGAAGCCGCACCAATCGATCTGAGCATGGACGTTTTGGATCTTAGCAAAAAGCCCGCAGTTAAGCCGATTGAAAAAGAGGTCGTGGCCGCGCCAATGCCAATGGCGGAAAACGGCATCGATCCTGAGAAAAAGCTCGATATTTTTTCGTATGTTAAGGAGAATCTGAATATGCCAAAAATGCTTGAACTCTGGAGCTTGTCGGCCCAATTCCCCTTCATGCCCGACTTCCGTCCACTGATGAATCAAATGTTCGCTGGCACTGCAGCCGGCAACCCATTTGTACAGCCCGGAATCGACATGAATAAAGCAAATATGCCAGCGCCACCAAACATGAGCGCTCCAATGCTACCGCATTTGAGCTCATTAATGGCTGATAAGCTAAATACGCATCCACATTCCACACCTAATCCAAATGTGCTGAACCAGATGCTACCCAAATCTCTAATGACACCTCCTGCACCCAATACCAATATGAGCATGCCACGTCACTCGCACATTCCACCGACTGTACTGCCAGGTGGACCTGTGAAAATGGTCATAAAGAACGGCGTGCTCATGCCAAAGCAAAAGCAACGCCGTTACCGCACCGAGCGACCATTCGCCTGTGAGCACTGCTCGGCGCGCTTCACACTACGCTCAAATATGGAGCGGCACGTAAAGCAGCAACATCCACAATACTACGCACAACGCCACCGCAGTGGACATCATGCTATGCGTGGCCGCGGCGCTAGCGGTGCGGCAGCGATGAATAGCATCACCCACTTGCAGGCGGCATTCGCTCAAGCGCACAATCAAGCCGGTCAAGGGCAGGGCAATGGACTGGGCGCCTCGCCCATATCCGAACAGGTGAAGTATGCCATATTAGCGCAGCAGCTGAAGGCACGCAAGGACACCGACCTGCTGCAACAGGCTTTGGCACACGGCTCAAGCAGCATAGGAAATAATCATCATATGTTGTTGAATGCCACCACCGCACTCGGACCGCTTGCGCCACCAAACGGACTGCAATTCCCATTCAACCAATTGGGTCAGCCAACCAACATTAACGGCTCCATCGAAGACGACGAACCGAAATTGATTATTGATGAGGATGAAGACGACGATGGTGTCGAAGAAATACTCGATGACAAcgaagaggaggaggagctacAGATCGCTAACGAAAATGTCGAAAATATGCGTAAAGCTCAACCACAACCACCTGCTGTTGAAGAACTAAAGAATACGCCACTTGGCAGTGAGTGCACTAACGAGACGGCGAAGAAAGTGGCAGAAACAATACTGGAGCAGGCTATCAAAACCGGGCAAAAACTAAATTCAGCGGCTGGTAAACCCAATGCAACGTTAGCAGCCAAGCCTGCACCCGCTAAGCCCATTGTGCCAGCAAGTCCTGCCGCACCCATTGCACCTGTCACACCGGCCAACACCATGAAAGCTATGATCGCTCAAGCCGAATCTGTGGGAAAATTCCTAAAAGAAGTGGCCAGCTCACCATTCAAAGACGAGTCTCAGGATTTGGTGCCAGTTTCCAAGCTGGTCGACAATGCTACCAGCAACGCCGTTTCATTCAACAACTATTTCCGACCCAGTGACGTGGCCAATCACATGGAGCAAAGCGACGAGGAGGGCTTGGTTGCTTCCGGCAGTGCCAGTGAAAGCAATAACTCCGGTACCGAAGATGTAGCCACGCCAGTTGAACCGAAAAAGAAATCTGCCTATAGCTTGGCTCCGAATCGCGTATCATGCCCCTACTGCCAACGCATGTTCCCTTGGTCGAGTTCCTTGCGCCGACACATACTTACGCACACCGGTCAAAAGCCATTCAAGTGCTCGCATTGTCCACTGCTTTTCACCACGAAGAGCAATTGTGACCGTCATTTGTTACGTAAGCACGGCGACGTGGAATCGGCGGTGTCTGTGTATGTGCCAACCGAAGATGTGAACGAGCCGATACCGGTGCCAAAGTCGGTCGAAGAGATCGAACAGCAGCAGCGACAGCGCGAAGAGGAAAAACGGAAGCGCAAAGCCGAAGAGGCGCAGTTGGAACGCGAACGGCGCGAGAAGGACCAACGTTTACAGCACGAGCaagaacaacaaagcaaacTGCTCAAACAATTGGCTGTAGCACAGCTACAACAACATTTTAATGTCTCAATGAGCGCAGCCAATACCAGCAACGCAGATGCTGATGCACGCGCCAAAGAGAATCTTTCACAACTGAATGCCGATTTGCCCTACAAGTGTCACCTGTGCGAAAGCTCCTTTGCCGAGCGTTTCAACTGCCTGGAGCACATCAAAAAGCAACATGCACCGGAATTCACGCTGTTGCTATCCAAAGGCGCCATCGCCAGCGAAGCAGAAGCCAACCAAACACATCTCATCGAAGATGAGGAACGACGCATAGGCGAAGAAGTCAATGGTTTCACTTCATTGTTGCCCAAATTACCAGCTTACACCAATCGCAAAGTAATCTGCGCCTTCTGTGTGCGACGCTTCTGGTCTACCGAAGACTTGCGGCGTCACATGCGTACACATTCGGGTGAACGACCATTTCAATGTGAGATCTGCTTGCGCAAATTTACGCTCAAGCACAGCATGTTGCGCCACATGAAGAAGCACACTCATCGTGGCCAAAATGGCGTAGCTGGTAGCGATGCTTCCACCACCGGCAACAGTGGGTCCGACTTCTCAGACGAGGAACAAATGCCTACACCGCCCACGTCTACGCTCAACAACACCGTCACGACGGCAGCGACAACAGTCAATGCGATCGCGTCCGCATCTGCGTCTGCGTCGGTAACTGCGCTGCGTACACCGAAAATACAGGAGTTGCTGAGCAAAGCAAATGAGTGGCGTAGCAGTAATTTGGGCGGTGAGCAGAAGGAGAATATTGCCGAGGAGCAGCCAAATGGATTGCATAACGATTTAATTGGTAATCTACTGGGCATCAGCGACCAAGGTATACTAAACAAATTACTCTCGTCCGCCGATGAAGCGGCCAAACTATTGGGTGTGGAGAAGTGA
Protein Sequence: NNKNNNSDNINNNAANNNNKNNNANRNSLDNFKRKFSDLHDEADVEADDTTMMLALKRRMKTTINNNVIGEDLHAVGAPVDHKNEGDAVVTKKMHTSSSASAASDDDDGEHKPHFQYPVCPVCNADEFANMNALDHHLETVHADIPAKCRLCAVVFRKHSQLSMHFCPQSMPGNDQLPLKECVKCRRSFPNSKDLELHTRECDSAVVRHKRRSRSLSDSYTVPPLSETEIEEKTSLARNNFFRQLYLQSQKPFCAQSMISLPSPLHSANEEGDAGNASNTDIKQEADTEPIDQLSSNLLSQQSHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSLDKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYTICDKAALVRHMRTHNGDRPYECAECNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSTCEDPAKKLHMFSSPDFDDDMELQYQQHHPKDRSTPVSHLKEMLTGESPSAKPMKIQVKSLEQLLDKSTGSVGSYNESYEERPAPHSMQHLEAAPIDLSMDVLDLSKKPAVKPIEKEVVAAPMPMAENGIDPEKKLDIFSYVKENLNMPKMLELWSLSAQFPFMPDFRPLMNQMFAGTAAGNPFVQPGIDMNKANMPAPPNMSAPMLPHLSSLMADKLNTHPHSTPNPNVLNQMLPKSLMTPPAPNTNMSMPRHSHIPPTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRHRSGHHAMRGRGASGAAAMNSITHLQAAFAQAHNQAGQGQGNGLGASPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSIGNNHHMLLNATTALGPLAPPNGLQFPFNQLGQPTNINGSIEDDEPKLIIDEDEDDDGVEEILDDNEEEEELQIANENVENMRKAQPQPPAVEELKNTPLGSECTNETAKKVAETILEQAIKTGQKLNSAAGKPNATLAAKPAPAKPIVPASPAAPIAPVTPANTMKAMIAQAESVGKFLKEVASSPFKDESQDLVPVSKLVDNATSNAVSFNNYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVATPVEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVNEPIPVPKSVEEIEQQQRQREEEKRKRKAEEAQLERERREKDQRLQHEQEQQSKLLKQLAVAQLQQHFNVSMSAANTSNADADARAKENLSQLNADLPYKCHLCESSFAERFNCLEHIKKQHAPEFTLLLSKGAIASEAEANQTHLIEDEERRIGEEVNGFTSLLPKLPAYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHTHRGQNGVAGSDASTTGNSGSDFSDEEQMPTPPTSTLNNTVTTAATTVNAIASASASASVTALRTPKIQELLSKANEWRSSNLGGEQKENIAEEQPNGLHNDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00082376;
90% Identity: iTF_00082376;
80% Identity: iTF_00082458;