Basic Information

Insect: Anastrepha ludens
Gene Symbol: -
Assembly: GCA_028408465.1
Location: JAPVRI010000871.1:1388-3560[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.065 11 8.1 8.9 1 23 293 316 293 316 0.96

2 9 5.7 9.6e+02 2.0 0.1 2 21 323 342 322 343 0.85

3 9 0.015 2.6 10.1 1.6 3 23 357 378 356 378 0.93

4 9 0.0002 0.033 16.1 1.0 2 23 390 411 389 411 0.95

5 9 9.7e-07 0.00016 23.3 2.7 1 23 417 439 417 439 0.98

6 9 1.8e-06 0.00031 22.4 1.0 1 23 445 467 445 467 0.98

7 9 3.6e-05 0.006 18.4 0.7 1 23 473 495 473 495 0.98

8 9 0.00052 0.088 14.7 2.4 1 23 501 523 501 523 0.97

9 9 5.1e-06 0.00086 21.1 4.1 1 23 529 552 529 552 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.065	11	8.1	8.9	1	23	293	316	293	316	0.96
2	9	5.7	9.6e+02	2.0	0.1	2	21	323	342	322	343	0.85
3	9	0.015	2.6	10.1	1.6	3	23	357	378	356	378	0.93
4	9	0.0002	0.033	16.1	1.0	2	23	390	411	389	411	0.95
5	9	9.7e-07	0.00016	23.3	2.7	1	23	417	439	417	439	0.98
6	9	1.8e-06	0.00031	22.4	1.0	1	23	445	467	445	467	0.98
7	9	3.6e-05	0.006	18.4	0.7	1	23	473	495	473	495	0.98
8	9	0.00052	0.088	14.7	2.4	1	23	501	523	501	523	0.97
9	9	5.1e-06	0.00086	21.1	4.1	1	23	529	552	529	552	0.98

Sequence Information

Coding Sequence: ATGGTAGGTTTATGTCGGTTATGCGCCGCTGTGCGTAAAAGGGATATGTTAATTCCCATGGCCGTTGATGTGCATCAGAAATTAAGGGAATGCTTTGCGCTGGAAATGTGTCAACCTGGGGATAAATTGCCAAAACGTGCCTGTGCTATTTGTTTAGATACATTGCAAAAtgcatataatttctttaagAAAGTACAGGAGTCCCAAGAATTGTTAACGGTATTGTTCGATGAATTAAAGGaggaatcaaataaaaatagcgAAGTATGTATGAGATTAAATGAGGAAATCGATGCAAAATTTCATTCCACTGATGTAGTTAAAGAGGATTCAGTGAAGAACACTGACATAAATGGTAAGCGAATAATAGTATCGGACTCGATCCAGTTAAATGTTGAATTGGTGAAAGGAAATCACGAAAGAGATGAATTTGAAGAATATCATGTAATGGAAAGCGAAGAGCTTATGAGAGTTGAGACTCTGTCAATAAATAGCGAACGCAGTGGAGCAAAAAGCCCTAACCAGCTTTCGGATAGTAGTACAGAAGTTGAAACCTACATTTTggaggaagaggaagatctGGAACAAGAGCAGGAACAAATATATGAGCTTGAACCCGAGAGActattaaaaaaagacgataaGGTAACCGATAGTAATTGCAAGTCTACAATAATTGAAATCATACCTTCGACTAATGATGACAGCAGATATTCGAAGTGTTTACAAGCAGAAGACAACGACAAAATCCAAGTAGCAGAATGGAGCGCTTACTCTTGGGTTTGCTATTCCTGCTCGGAGACCTGCGAGAATTTCTTTGCGTTGCTTTTACATTGCAAAGAAAATCATAACATCATTGACGCcaattatatgaaatataaatgtGCTGATTGCCACAAAATATGCACCCACTATAATAAATTCCTTAATCATATACGATTCCGTCACAACCCAGAATTAAGTTTACGATGCGACGTTTGCGATGCTCAACACGAAAGTTATTCACAATTAGCTCTTCACAGAGAGACGACTTGTGCGGCAGCTCAGTCATATCCTTCGATCGATTTGTGTAGTAAATGTGGCAAAAGTTTTCACAATCGAAATGGCACAATGGTACATGCGCGTGCCCAACACACTGAAGGGAATAGTGACGAAATCAAGTGGCTATCATGTGCTCAATGCGATAGGAAGTTCAAACGGGTTGCCAATCTACGAGCACATGAGCATATTCATTCTGGTTTGAAAGAATATATGTGTGAAATTTGCGATCGCAAATTTCGTCAAAAGCACAACTTAGAAATTCATTTGTATACACATATAAATGATAAAGTTTTCGAGTGCAAAATTTGCAAGAAaagTTTAAAAACGTCAGCAAGTTTGGAAAAACACCAGCAAATTCATAAAGATATCAAGAAGTTCGTCTGTGATTATTGCGACAAGGAGTTTCGCACAAAAGATGCAAAGCTGTCCCACGAACGTATACACACTGGTGAAAAACCATTCAAATGTATATATTGTGATCGGTGTTTCCGGTTTCGTAGCGGCTTGATGggtcatattaatatacatacggGGGAGCGCCCATATTCGTGTCAAGATTGCAGTCGTCAATTTACCAATTGGGGTAACATGAACAAACACATGAAACGTTGTCACAAGCGCGATAGTGGTGAGAAAAGCAAATAG
Protein Sequence: MVGLCRLCAAVRKRDMLIPMAVDVHQKLRECFALEMCQPGDKLPKRACAICLDTLQNAYNFFKKVQESQELLTVLFDELKEESNKNSEVCMRLNEEIDAKFHSTDVVKEDSVKNTDINGKRIIVSDSIQLNVELVKGNHERDEFEEYHVMESEELMRVETLSINSERSGAKSPNQLSDSSTEVETYILEEEEDLEQEQEQIYELEPERLLKKDDKVTDSNCKSTIIEIIPSTNDDSRYSKCLQAEDNDKIQVAEWSAYSWVCYSCSETCENFFALLLHCKENHNIIDANYMKYKCADCHKICTHYNKFLNHIRFRHNPELSLRCDVCDAQHESYSQLALHRETTCAAAQSYPSIDLCSKCGKSFHNRNGTMVHARAQHTEGNSDEIKWLSCAQCDRKFKRVANLRAHEHIHSGLKEYMCEICDRKFRQKHNLEIHLYTHINDKVFECKICKKSLKTSASLEKHQQIHKDIKKFVCDYCDKEFRTKDAKLSHERIHTGEKPFKCIYCDRCFRFRSGLMGHINIHTGERPYSCQDCSRQFTNWGNMNKHMKRCHKRDSGEKSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00081613;
90% Identity: iTF_00083364;
80% Identity: -