Basic Information

Insect: Anastrepha ludens
Gene Symbol: salm
Assembly: GCA_028408465.1
Location: JAPVRI010152579.1:1-11032[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5.9e-06 0.001 20.8 0.9 1 23 585 607 585 607 0.98

2 7 1.2e-05 0.002 19.9 2.1 1 23 613 635 613 635 0.98

3 7 0.02 3.4 9.7 1.5 2 23 995 1016 994 1016 0.98

4 7 8.4e-08 1.4e-05 26.7 0.5 1 23 1022 1044 1022 1044 0.98

5 7 0.00026 0.044 15.7 2.3 1 23 1054 1076 1054 1076 0.98

6 7 0.043 7.3 8.7 3.1 2 23 1504 1525 1503 1525 0.97

7 7 4.4e-08 7.5e-06 27.5 1.4 1 23 1531 1553 1531 1553 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5.9e-06	0.001	20.8	0.9	1	23	585	607	585	607	0.98
2	7	1.2e-05	0.002	19.9	2.1	1	23	613	635	613	635	0.98
3	7	0.02	3.4	9.7	1.5	2	23	995	1016	994	1016	0.98
4	7	8.4e-08	1.4e-05	26.7	0.5	1	23	1022	1044	1022	1044	0.98
5	7	0.00026	0.044	15.7	2.3	1	23	1054	1076	1054	1076	0.98
6	7	0.043	7.3	8.7	3.1	2	23	1504	1525	1503	1525	0.97
7	7	4.4e-08	7.5e-06	27.5	1.4	1	23	1531	1553	1531	1553	0.99

Sequence Information

Coding Sequence: TCAGATGATTCGAGCGATCAGGAGGAGAATGGTGCTTGCTGCTCGCCCATTACTAGCCAAGAAATGGCGAGTAACAAAGACTCCACAAACACAACAACGGCAACAACGGGAGCTACGAATGTGGTTGCCTCGCCGCAGCAAAGCGCAATTGGCAATGATTTGTCCGTTGCGGCACAAGCCCAAGATCGCGCACAAAGCGCAGCCGATGTGGCAGAAAATAGCACAACAACAGAAGCTGCTGCACACGACGTTGCAGTCACTGAAGATCACAATCacaacaacaccagcaacaTCGACGGCAATAGCAATAGCAACGGCAGCGCCCATGATGTTATAATGTCCGGTGCATCGGCAACGCGACTAGAACAAGCGCGCGGCTCGACACCCGTGGAGCGTTTACTACAATTGAAATCACTTGCCAATGCGGCGGATGTGACGACGACAATGACAATGGTGAGTGGAGACAGCGCCGCGTCGGCAATTAGCGCTGCCAGTTCGCCGCCATACAATACATATCCCACAGATAACGCTTGTAagactaacaacaacaaatttggtTCACCCACGCCTATGGATATGGAGGAGCAGGAGAGACCGCTTTATGCATCGGCAGGCACGATGGCAAAGCAACGCGCGCCAGCAATTGAAGGAGGCGGTGGCGGCGACAACGACGAAGAGGAGGAAGATGAGGAAGAGCAGGGAGCACAGGCACCTGAAGAATTTGCGCTGAAACAGCATGCAAAAGAATTAACTGCTAATTCAGCAACACCAAAGCCCAGTGGCTCAGAAGAGGTCAACAATGCAGCTGCTACATCCGATACAGATACCATTGCGAAGACCACTTCTGCGCCCCTGACACCCACCGCTAGCATATTACCACAAAATGCTGCCGCTTTTGGCGCCGCACCCGTCAATCTGGAAGCCATACAAAATATGCAAATGGCTATCGCGCAATTTGCCGCCAAGACGATTGCGAATGGTGCGCAGGGCGGCGATAATGACGCGGCTATGAAACAGTTGGCATTTTTGCAGCAAGCGCTGTTCAatctacagcaacaacaactttttCAAATACAACTCATACAGCAGCTGCAATCGCAGTTGGCAATGAATCAGCCGAAGGGTGCAAGCGAAGGGGAGGTTGAGGGGGAGGGTGAGGGTGAAGAAATGGAAGAGGAGCGTGAAGACGGCGAGGAGGATACatatgaagaagaagaacgtATTGCGGAGATGGAATTGCGTCAGAGAGCGGAAGCGCGCATGGCTGAAGCGAAGGCGCGTCAGCATCTGATAAATGCAGGGGTACCGTTGCGTGATGAAACCGCCCCCGGTGCAAGCGCAACCACGTCTAGTGCGTCAGGAGCAGCTAGTGGCGCATCTCCCTTGGAGTCGCTAAAACGCAAGCGTGAAGATGATAGTGATGCCTTTGGCAGGGCCAGCGCCAGCAGACGCATAAGCGTTGAGGTGACGCACGGCAGCGCTACACGACACGGCGAGCAAATGCCAGCATCATCGGATCCGCTGAGTAAGCTGAAGGAGTTGGAGAATATGCCACTGCCGTACGGTTCCGATCTCGCGTCTACCATAATTACCAATCACGATGATCTACCCGAGCCCAATTCACTAGAGATGCTGCAAAAGCGTGCGCAAGAGGTGCTGGACTCCGCCTCGCAGGGCATACTCGCGAACAATATGGCCGATGAGTTTGCATTCAGAGATAAGAATGGTGATCGTAATGAGCCATTCTTCAAGCATCGTTGCCGCTACTGCGGCAAGGTGTTCGGTTCCGATTCCGCGCTCCAAATACACATTCGTTCTCATACCGGCGAACGCCCATTTAAGTGCAACGTTTGTGGCAGCCGCTTCACCACCAAAGGCAATTTGAAGGTACACTTTCAGCGGCACGCGCATAAGTTTCCGCATGTGCCAATGAATGCTACGCCTATACCCGAGCACTTGGACAAATTTCACCCACCTCTGTTGGATCAAATATCGCCAGATAGCTCGCCATCTCATACACCGGCCGAATTGCCACAGCAAATGCCACAACACATGCCGCCTGTGTCACTGCCGTTACCCTTTCCACCCAGTACTGCTTTCCCCGGCTTGCCTGGCCTGTACCGGCCGCCAATGGAGCTGCTTAAGTCTTTGGGTAACGCTGGCTTTCCTAACCCGTTTTTTCCGCAAATGCCGCTCGTTGCGGGGTCACGCACAGAGACCCCTGCAACACAGACTGCGTCCAAGGGAAATAAGCAAGATATACCTACAGATTTGCGCAAGTCCTCGGCGTCCAACTCACCCGAACTGCCTGTGAAGACTGAAATTACGGAGAAAAAGGAAGACGATCAATCAACAGTGCAAAAGGTAACGTCGCGGTCATCGGAACCAACAAATGGTGATACACCACCGGACGCACCGCCAGCGTTGGACATAAAAATCAAGGAGGAAAGTATCGATATAGACTCGCACGACGAAGAGATGGATCGTGCGGACACTCCACCCGCTCAGTCAGCATTATCACCTGTACGCGCTACCTCATCGCCAACACAAACGAGTGCTAGCGCGCCCTTCACGCCTCCAACTCCAACCTCAAAACCGTTGGCACTGACACCTGTGGGGCACCCGGCACAACCACCAATTACAATTCATGCGCATCCCTCACCAGGAATGCATAATCACCTCGACCATCTGCCCACACCTGGCCAGTTGCCGCCGTCTTTCCACCATCGGGACGACTTTTTTGCGGAACGTTTCCCATTGAATTTTACGAAAAATCTCTCACCCGAACATCATTCACCCATACGCTCGCCCGCCCACTTACAGCGCTCACCGTTCTTCAATCCGATCAAACACGAGATGGCACTACTGCCACGCCCACATAGCAATGACAACTCTTGGGAGAATTTCATAGAGGTTTCAAACACTTCGGAAACATTAAAGCTGAAGGAGCTAATGAAGAACAAGAAACTTACCGATCCGAATCAGTGCGTCGTGTGCGATCGTGTGCTGTCGTGTAAGAGCGCTTTGCAGATGCATTACCGCACCCACACAGGCGAACGACCTTTCAAGTGCCGAATTTGTGGGCGCGCTTTCACTACCAAAGGTAATTTGAAGACGCACATGGCCGTGCACAAGATTCGGCCACCCATGCGCAACTTCCACCAATGCCCCGTCTGCCACAAGAAGTACTCGAATGCACTGGTATTACAGCAGCACATTCGACTGCACACAGGCGAGCCGACCGATCTAACACCCGAACAAATACAAGCAGCCGAAATACGTGATCCCCCGCCATCAATGATGCCCGGCGCCTTCATGAACCCCTTCGCAGCAGCAGCTTTCCACTTCGGTGCTATGCCGGGAGCAGGCGCTGCTATGGGTCATCTAGGCCCGCACAATGGCACTCTGGGTTCAGAGTCATCGCAGGGTGATCTGGATGAGAACATCGATTGCGGCGATGACTTCGACGATGATATCTCCTCCGAACACATGTCCAGTGGTCATGACTTAGATGTAAGCGATCGGCCGAAATCCAGTGATGACTTCAAAGGCCTGCTTTTCGAGCAAAAGCTACGAATCGACGCCAGCGGAGTCGTGAATACCACACCCCGACCCCGCTCGTCTACCAGCAATGCAAACTCAATAAATTCCGCCCCAACCAGCCCTAGTTCGGGAGCTCCGCGTCAATGCTCTACGCGCACCAGCTCGCCGGCTCGCTCTATGTCTGAAGCATCTCAAGGCGCGTTGGATCTGACGCCGCGCGCCGTGCCTGTGCTCgcgagcaacagcagcagcagctcgcGTTCACCAGCGCCAACAGCCAGTGCAACTCAAGCAGGTGGACGCAAGTCACCTACACCACCACTGCGTAATAGCAGTGCCAATAGCAACACAACAAGAAGCCCAAATCCTGTGCCCTCACAAAAATCACATTCACAGCTGAGTCCTGCTGCGGCGCTTACCTCACCTCTGGTGCCCACCTCGGCTGTCGATTGCTTGCCACCAGTGCTGCATCACCACTTacagcagcaacatcagcaaCTAATGCAGCAGCAAGCGGTAGTGGCGGCAGCAGCGCATGCACAGGCTCAAGCGCAGCACCATCACCAACAACTGCAGCAGCATGCAGTCGCTTTTCATGCGGAGCAGCTGCGGCGTGAGCACCAAATAAAGCAGGAGCAGCAGCAGGCGGCACATCAGCAACATatgcgacaacaacaacaccagcaagAGTCACATGCcaacaccaacaagcagcagcagcagcagcaggcggcggcggcggcccagcaacaacaacaggcaTCGGGTGCGCTACCACCACAGGGGCCACAACCACCGAACCCACTGGTTGCGGCGCGTCCGCCCTTCGGCATGTTCCCCAATTTGCCGCTCTTTCCGCCAGCCACTGCGCAAACGATGTGCTCAGCTATGAATACGATTGCGCAATCGGTAATGCCGGCGGCACCATTCAATCCACTTGCACTTTCCGGCGTGCGAGGGAGCACCACCTGCGGCATCTGTTTCAAAACATTCCCTTGTCATTCAGCTTTAGAAATTCACTATCGCAGTCATACCAAGGAGCGACCATTCAAGTGTACGATCTGTGATCGTGGCTTTACTACAAAGGGGAACCTCAAGCAGCACATGCTGACCCACAAAATACGGGACATGGAACAGGAAACTTTCCGGAATCGTGCAGTAAAGTATGTAAGTGTTCCAAGAATATACGGATAG
Protein Sequence: SDDSSDQEENGACCSPITSQEMASNKDSTNTTTATTGATNVVASPQQSAIGNDLSVAAQAQDRAQSAADVAENSTTTEAAAHDVAVTEDHNHNNTSNIDGNSNSNGSAHDVIMSGASATRLEQARGSTPVERLLQLKSLANAADVTTTMTMVSGDSAASAISAASSPPYNTYPTDNACKTNNNKFGSPTPMDMEEQERPLYASAGTMAKQRAPAIEGGGGGDNDEEEEDEEEQGAQAPEEFALKQHAKELTANSATPKPSGSEEVNNAAATSDTDTIAKTTSAPLTPTASILPQNAAAFGAAPVNLEAIQNMQMAIAQFAAKTIANGAQGGDNDAAMKQLAFLQQALFNLQQQQLFQIQLIQQLQSQLAMNQPKGASEGEVEGEGEGEEMEEEREDGEEDTYEEEERIAEMELRQRAEARMAEAKARQHLINAGVPLRDETAPGASATTSSASGAASGASPLESLKRKREDDSDAFGRASASRRISVEVTHGSATRHGEQMPASSDPLSKLKELENMPLPYGSDLASTIITNHDDLPEPNSLEMLQKRAQEVLDSASQGILANNMADEFAFRDKNGDRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAHKFPHVPMNATPIPEHLDKFHPPLLDQISPDSSPSHTPAELPQQMPQHMPPVSLPLPFPPSTAFPGLPGLYRPPMELLKSLGNAGFPNPFFPQMPLVAGSRTETPATQTASKGNKQDIPTDLRKSSASNSPELPVKTEITEKKEDDQSTVQKVTSRSSEPTNGDTPPDAPPALDIKIKEESIDIDSHDEEMDRADTPPAQSALSPVRATSSPTQTSASAPFTPPTPTSKPLALTPVGHPAQPPITIHAHPSPGMHNHLDHLPTPGQLPPSFHHRDDFFAERFPLNFTKNLSPEHHSPIRSPAHLQRSPFFNPIKHEMALLPRPHSNDNSWENFIEVSNTSETLKLKELMKNKKLTDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGAFMNPFAAAAFHFGAMPGAGAAMGHLGPHNGTLGSESSQGDLDENIDCGDDFDDDISSEHMSSGHDLDVSDRPKSSDDFKGLLFEQKLRIDASGVVNTTPRPRSSTSNANSINSAPTSPSSGAPRQCSTRTSSPARSMSEASQGALDLTPRAVPVLASNSSSSSRSPAPTASATQAGGRKSPTPPLRNSSANSNTTRSPNPVPSQKSHSQLSPAAALTSPLVPTSAVDCLPPVLHHHLQQQHQQLMQQQAVVAAAAHAQAQAQHHHQQLQQHAVAFHAEQLRREHQIKQEQQQAAHQQHMRQQQHQQESHANTNKQQQQQQAAAAAQQQQQASGALPPQGPQPPNPLVAARPPFGMFPNLPLFPPATAQTMCSAMNTIAQSVMPAAPFNPLALSGVRGSTTCGICFKTFPCHSALEIHYRSHTKERPFKCTICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYVSVPRIYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00081574;
90% Identity: iTF_00081574; iTF_00083317;
80% Identity: -