Alud047191.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anastrepha ludens
Gene Symbol
ZNF526
Assembly
GCA_028408465.1
Location
JAPVRI010152977.1:878-3694[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.0065 1.1 11.3 0.6 2 23 386 408 385 408 0.95
2 11 0.022 3.7 9.6 0.4 1 21 479 499 479 500 0.95
3 11 7.9e-05 0.013 17.3 0.2 1 23 508 530 508 530 0.98
4 11 0.00088 0.15 14.0 0.2 1 23 534 557 534 557 0.95
5 11 1.5e-05 0.0025 19.6 0.2 2 23 564 585 563 585 0.98
6 11 9.5e-08 1.6e-05 26.5 0.5 1 23 591 613 591 613 0.98
7 11 5.7e-06 0.00096 20.9 1.2 1 23 619 641 619 641 0.99
8 11 2.8e-05 0.0047 18.7 0.7 1 23 647 669 647 669 0.99
9 11 2.3e-06 0.00039 22.1 1.1 1 23 675 697 675 697 0.98
10 11 0.0084 1.4 10.9 7.2 1 23 703 725 703 725 0.99
11 11 0.0014 0.23 13.4 3.3 6 23 735 752 733 752 0.97

Sequence Information

Coding Sequence
ATGGCAATGGACATTGAGAAGATCTGCCGCACTTGCCTGGGTCTTAGTGGTCCATTACTCTCTATATATGATGGTGGTGGTAGTGGAGGAGGATGTATTGCAGATATGCTACGCGACTTCACAAAATCCAAGCCAAGACGAGAAGATAAACTCCCGGAAAAGGTTTGCTTATCCTGCATAAGCGAAATTAATCGTTGCTACTCATTTAAACTGAAATGCGAGAACTCGAACCGAACACTACGTCAGGTGGTGCCTGATGCTCCTCCTGAAGAAATAACTGTGCCGGAATCAAAAGTAAAATTGGTTCAGATTGATAAAAGTGTGCAAACTAAGCCGGAAGCCGTGAAGAGTTTTGTCACGGTGTATACTCAAACGAAAGAAAATGTTGAGGTGGAAAAAACTCACCAACATGTGCAAACAACGCCAATGCGTGACATAATGCACGAAAAGTCAACATCGCCAATATTGATAGAACACAATAAAACGTACAGATATGATGAAGGAATGCTCGAAAAAGTTTTCAACGCAGAAATAGGAGGGGAAattgaaattgttgaaaacagCAACGTTCAGCGTAAAAAAAATCTGCGACAGtttgaaaaagttttcaacGCAGAAATAGGTGGGGAAattgaaattgttgaaaacagCAACGTTCAGCGTAAAAATAATCTTCGACAGGCATTAACTCTAAAACGAAGACGAATAGAAGATTTTGAACAAACCGACATAGATGGAACCGAAATCATTATGGAAGTGCACACAGAACAACCAGAAGAAAATGTTGAAGGAGTGACTTTGTTTTCAACTTTACATGAAGATCCAGAAGAAGCAAACGAAAACACTACTACCTACTATCAGCTTTGCAATTCTCAAtcagaaaatgaaaatgaaaacattgCCACAAATAATGGCAACAATTTGGAGGAATTAAATCGAGCAAAGAATAACGACGATGAATTAGAAGAAGGAGTTTATGCTCAATTTGTATTGGACGATGAAACCGAGATATACAATGCACAAACAGAAGATTACAATTTCATGATTTACAAAAATGATAGCGGTGATCCGGAAATCATAGCTAAAAGACAACTAATGGAAACACGATCAGTAGCAACAAGAGGAGAAAAACAGCGTACGACCAAAGAAGAGATGAAATGTGCTTACTGTTCGATGACATTTGTAAGTGCGAAGCGTTTAGCTCGCCACGAGTTGAAGCGACATGCAGAAGACACTCGAAAAGAAAGTGAAGAGGTCAAGCTACCGATACCAACTATGATAAAGGAAAACTCCAAGGAAAAGAACTCAGAAAAAGGTAATTTGAAAGACGACAACTCTACAAATGTCGTAACTGCCGAACCTACCGCAACCACTGTCACTTCTTCCATCACACCTCAGCCGATTGTACAGAAAACAGAACCATCAAAATTGACCTATTTTTGCGATACTTGTGGTGCAGGATTTGCTCTGCGAAGGTCTCTGATCCAtcatagaaaacaaaatttttgcaataaagTTACTTATAATTGTGATATATGCGATCGAGTCTTCATCTCTGTCGAAACTTTGAAAGAACACAAGGCTACGCATTTGCAAGATCATGAATGCACCGAATgtgagaatttttttgcaacGAATGACGAGCTTAGCGAGCATATGGTAGTTGTGCATAAGCGAAATTTACGCAACCAATGCCCTCTTTGTAAGAAAGTGTTCACCATACTGTCAGCGCTAAAAGACCATTTACGTGTTCACAGCGGTGAAAAGCCATTTGTGTGTGATATATGCAGCAAAGCTTTTAGTCAGAAGGCGAATTTAAAACAGCATATAATGCgtcattcaaaagaaaaaaaattcaaatgcgaTGAATGTTCAATGAGTTTTGTCACCAAAGGCGAACTTAGTTCTCATAAGCGCACACACACCGGTGAGCATCCATACCGCTGTGATGAATGTCAGGCAACATTTACAATATCAAGTTCCTTAGTAAAGCATAAACGTATACACACTGGCGAACGACCGTACGCGTGCGAACTTTGTCCAAAGCGTTTTACATCGTCCTTCGCGCTGAAAAATCATCGGCGCATGCATACTGGTGAAAAGCCGTATAAATGCCGCTGGTGCAAcaaaacttttactcaaaaacagGACTGTGTTATACATCATCGTACTCACACGGGTGAGCGAAATCATGCCTGCTTTTGCGGTGAAAAGTTCACGCATCTGGGTACATTACGAACACACATGAAAACACACGACGCGAACGATGCAGAGAAAGGTAAAGGACTTTCCGTTCAAACGAGAAACTGTCGTGCTAAGAGTAGTAGGGGAAGTGTGGACACACGTGCATATAATATCACCATACTAGATGTGGACGAAGACGACGATGATGCCGACGCCAATGATGAAAAGGCCACAGTTGTTACTGTTGCACGTGAGGATATGGAGCGGGTACTGGCTAGCGATAAGTTGCGTAACAGTGAAGAAGTTGACACAGTTACTGTCAGTGAGGAAAAGCTAATGCAGATGACGATTGAAGTAGTTTAA
Protein Sequence
MAMDIEKICRTCLGLSGPLLSIYDGGGSGGGCIADMLRDFTKSKPRREDKLPEKVCLSCISEINRCYSFKLKCENSNRTLRQVVPDAPPEEITVPESKVKLVQIDKSVQTKPEAVKSFVTVYTQTKENVEVEKTHQHVQTTPMRDIMHEKSTSPILIEHNKTYRYDEGMLEKVFNAEIGGEIEIVENSNVQRKKNLRQFEKVFNAEIGGEIEIVENSNVQRKNNLRQALTLKRRRIEDFEQTDIDGTEIIMEVHTEQPEENVEGVTLFSTLHEDPEEANENTTTYYQLCNSQSENENENIATNNGNNLEELNRAKNNDDELEEGVYAQFVLDDETEIYNAQTEDYNFMIYKNDSGDPEIIAKRQLMETRSVATRGEKQRTTKEEMKCAYCSMTFVSAKRLARHELKRHAEDTRKESEEVKLPIPTMIKENSKEKNSEKGNLKDDNSTNVVTAEPTATTVTSSITPQPIVQKTEPSKLTYFCDTCGAGFALRRSLIHHRKQNFCNKVTYNCDICDRVFISVETLKEHKATHLQDHECTECENFFATNDELSEHMVVVHKRNLRNQCPLCKKVFTILSALKDHLRVHSGEKPFVCDICSKAFSQKANLKQHIMRHSKEKKFKCDECSMSFVTKGELSSHKRTHTGEHPYRCDECQATFTISSSLVKHKRIHTGERPYACELCPKRFTSSFALKNHRRMHTGEKPYKCRWCNKTFTQKQDCVIHHRTHTGERNHACFCGEKFTHLGTLRTHMKTHDANDAEKGKGLSVQTRNCRAKSSRGSVDTRAYNITILDVDEDDDDADANDEKATVVTVAREDMERVLASDKLRNSEEVDTVTVSEEKLMQMTIEVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00083258;
90% Identity
iTF_00083258;
80% Identity
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