Alud026106.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anastrepha ludens
Gene Symbol
-
Assembly
GCA_028408465.1
Location
JAPVRI010103491.1:9804-11846[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 5.5e-08 6e-05 24.4 0.1 3 43 45 84 43 92 0.88
2 5 1.7e-06 0.0019 19.6 5.7 3 44 114 154 112 154 0.93
3 5 5.8e-10 6.4e-07 30.7 6.4 2 44 215 254 214 254 0.95
4 5 2e-11 2.2e-08 35.4 2.1 3 43 300 337 298 338 0.96
5 5 8.7e-06 0.0096 17.4 0.7 3 43 361 398 359 404 0.91

Sequence Information

Coding Sequence
ATGGAAATTGATTCCTCTGAGAGGACGAGCGCGCAATTCACAAATATAACCATCCAAGAGGATTTCATTGAAGCTGAGTCAACAGAAGATCGTATTATTACAGGGAGTACTAAACGGCGAAAGTATAGCTTTGTATGGCAGTATTTCCGCCCTTTAGGAAGTAGTAGTGGCGGCTCACTAGAGTGCATTATATGCGCCAGCAGTGTTAGCAATCAAACTAGTAATTTGGCCCGCCATTTATTTGCAGCCCATGATATAAACAGACAAACACATCACGGTGAAGGGGATAGCCAAGATCTTGCAAATAATAGTGCACTCGGTCGGACAAGTCGGAGTTTTATATGGAAATATTGTACTAAGGAAGACTGCAGATACGCGCGCTGTCATTTGTGCAATAAGCTACTCTATTTCGGTGGTGGAAATACCGCGAATATAACCAAACATCTACGTCGTAAACATTCGGGAGCAATTAGTTCTCACGAATTGGGAGGTTCAAAAGACATGGAGGATTCGGAAGAATTCGTGGCTGAGATGTCCAATCAAATGGACTCGACCATGAACAATTTAGAAGACGAGGTTACTAAAATGAAGGGCGAAAATCATTCTGATGTAAGGCTACGAAAGGAACGCAAAGGAAGCAGTTATGTTTGGAATTATTGTGATAAACTTTCAAGGCACACAATTCGTTGTAAACTTTGTAAGAAAGTAATGAGTTTCCATGGCACTGCAAATGTAATAACACATTTGCAACGCCGACATAATATTGTTGGACGGGTGGAAAACGAAGCGgcaattttaaataattttgccgATGAAGACAACGGGATGATTGATGTTAAGGATGAGCCTGAGTCAATTGTTCATCGGCGCAGACGGTCGTCAGCGGCCACGAGCATTGTTTGGAAATATTGTACGCGGCTTGGACAAGATGTTGTGCGTTGCagcttttgcaaaaaaaatctatCCTTTCAAGGCACAAGTAATTTACAACGTCATTTACATCGTATGCATGGTATTGTTACGCAAGGACGTGGATTCGGGGAACTGGAGCAAGAATCCTTAGATATTGACGACAACTTTATATGGGAGCATTGTGAGCATACGGAcgatggaaaaattaaatgcaatatgTGCAACAACACGTTTGATGAAAAAGGTTTCGAAGAAATTCGCAGACATCTTACAGTAACACACGCAGTGCTCTCGAGTCCCCCGGCGAAACGTCATAGACGACGGCGACGAAATCTACCAGAgGAAACTTGTGACGAAACCGATGAATATGAATACGATAACGATGATGATAATTGGCAAGGGGTAAATGAGGAATATACGATAGAATACAATGATGCAAGTGTGAAGAAAGATCAACCAACGTTTGAAGATATAATAGAGGAAGATCATGCGGGACAAATTAATGGTGATGAGGACCCTTTCGATCCTAACGTGATGCACAATTACCCTGTGGCGCGGCCTTTATCTGCCTCTTCAAGCCATGAAGCAACGCCagatcgattttttaaaatatcggcAGATACTAACCGACTACGTAAATTGAATGAAGAACGTTTACGTATGGAAACCGAGTACTTCCGTGAAAAAGCGGGCTATTACCGTATGCAGAAATATTTTACTGCATTGCAGGCTAAAAAAGTCAGACTCGAGTTGGATCGCTTACAAAATTCAAGTCCAAATGGCACCGCTTACAATGTTAATACAGACATGCCAGAAGCGCGCACTTCCACAGCTACCATTTATAATAATCAGAAAAAATAA
Protein Sequence
MEIDSSERTSAQFTNITIQEDFIEAESTEDRIITGSTKRRKYSFVWQYFRPLGSSSGGSLECIICASSVSNQTSNLARHLFAAHDINRQTHHGEGDSQDLANNSALGRTSRSFIWKYCTKEDCRYARCHLCNKLLYFGGGNTANITKHLRRKHSGAISSHELGGSKDMEDSEEFVAEMSNQMDSTMNNLEDEVTKMKGENHSDVRLRKERKGSSYVWNYCDKLSRHTIRCKLCKKVMSFHGTANVITHLQRRHNIVGRVENEAAILNNFADEDNGMIDVKDEPESIVHRRRRSSAATSIVWKYCTRLGQDVVRCSFCKKNLSFQGTSNLQRHLHRMHGIVTQGRGFGELEQESLDIDDNFIWEHCEHTDDGKIKCNMCNNTFDEKGFEEIRRHLTVTHAVLSSPPAKRHRRRRRNLPEETCDETDEYEYDNDDDNWQGVNEEYTIEYNDASVKKDQPTFEDIIEEDHAGQINGDEDPFDPNVMHNYPVARPLSASSSHEATPDRFFKISADTNRLRKLNEERLRMETEYFREKAGYYRMQKYFTALQAKKVRLELDRLQNSSPNGTAYNVNTDMPEARTSTATIYNNQKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00091456;
90% Identity
iTF_00081383;
80% Identity
iTF_00082269;