Alud032273.2
Basic Information
- Insect
- Anastrepha ludens
- Gene Symbol
- bab2
- Assembly
- GCA_028408465.1
- Location
- JAPVRI010118497.1:32483-36715[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 2.7e-14 54.0 0.0 1 43 57 100 57 102 0.95 2 2 0.35 8.9e+02 1.2 0.1 15 29 157 168 152 170 0.80
Sequence Information
- Coding Sequence
- ATGATTGAAAGCGGACATCCCTGGATGGGTGGGGCATCAACCTCTTCAGTAACAGCAGACAGTTATCAATATCAACTGCAATCAATGTGGCAAAAATGTTGGAATACTAATCAACAAAATTTGGTGCAACAATTGCGCTTTCGTGAACGTGGGCCGTTAAAGTCTTGGCGTCCCGAAGCAATGGCCGAAGCTATATTTAGTGTGTTGAAGGAGGGTCTTTCGCTATCACAGGCCGCACGCAAATATGATATTCCCTATCCCACTTTTGTGCTATATGCAAATCGTGTGCATAACATGTTGGGCCCATCGCTGGATGGTGGTGCTGATCCACGTCCAAAAGCGCGCGGACGTCCACAACGTATTTTGTTGGGCATGTGGCCGGAGGAGCTGATACGCTCGGTTATAAAAGCGGTTGTGTTTAGGGATTATCGCGAAATTAAAGAGGATATGGGGCATGTGTATGCCAATGGACAAATGCAAGCGGCTTCCTCATTTGGTGTAGCTGGTAATGCTGCTGTCGCAGCCGCTGCGGCTAATGGCTATCATAATGCCGCCAAACTCGCCGCACAGAATGCTGCCCTTGCGCCACCCGATTCGCCCAGTCCACTCTCCACCATGACCGAAACATTGCGCCGCCAAATAATGTCACAGCAGCAGCAATCACCCATCTCGCAGACGATGAATATGTACAAATCGCCAGCATATTTGCAACGTTCCGAGATCGAAGATCAAGTATCGGCTGCGAATGCCAAGCAGCATGCGGAAGCGCGCCGCAGCTCAGATAGCATGCCTGATTTGAGCACACTGGGTGGATTGATGGGTATACCCGGGTTGAATGTGATGCCCACACAAGCAGCCTCACGTGTTAGTCAACTGCATCAGAGTGGTGCTAACTATGCCCGAGAGCGTGAACGTGAACGAGAACGTGAGCGCGAGCGAGAACGTGATCTAAAAGAAGCCATGCAAGCGCGTCAATATGGCAATCAATCGCGTGGGTCTATCGGCGCGGTAAGTGGTGGAGGTAGTGGTAGTCAAAAGATGCCAGCCACTGCAGCTGCAGTCGCTGATCCGGCTGCCGCCTATGCCCACTACAAGAATAAAGAGCATGCCACCAACTATGCATTTAATAAGCGGTTTGCCGAGACGCTGCCGCCTGGCATAGATTTCGAGGCGATCGCCAATGGATTGCTGCAAAAGACGGTAAATAAGAGTCCGCGTTTCGAAGATTTCTTCCCTAGTGAATTTTTTGGCAATGCCGAAAGTGGTGCCAGCGCTGGAGCGGCATATCCACCGACACGCGAATCGCCGCTAATGAAAATCAAGCTGGAGCATCAGGCGAATGCTGAAGTACCGCATGAGGattaa
- Protein Sequence
- MIESGHPWMGGASTSSVTADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGADPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMGHVYANGQMQAASSFGVAGNAAVAAAAANGYHNAAKLAAQNAALAPPDSPSPLSTMTETLRRQIMSQQQQSPISQTMNMYKSPAYLQRSEIEDQVSAANAKQHAEARRSSDSMPDLSTLGGLMGIPGLNVMPTQAASRVSQLHQSGANYARERERERERERERERDLKEAMQARQYGNQSRGSIGAVSGGGSGSQKMPATAAAVADPAAAYAHYKNKEHATNYAFNKRFAETLPPGIDFEAIANGLLQKTVNKSPRFEDFFPSEFFGNAESGASAGAAYPPTRESPLMKIKLEHQANAEVPHED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00992470;
- 90% Identity
- iTF_00192011;
- 80% Identity
- -