Alud000072.1
Basic Information
- Insect
- Anastrepha ludens
- Gene Symbol
- Mblk-1
- Assembly
- GCA_028408465.1
- Location
- JAPVRI010000075.1:4875-13964[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.036 90 4.3 0.4 5 20 392 407 391 408 0.86 2 2 4.1e-18 1e-14 55.3 0.0 1 43 577 620 577 622 0.95
Sequence Information
- Coding Sequence
- ATGAAACGAACCGACGAATGCGCGAATGAACCAACAAGCAAACGAATAAATATACCAACGAATGTACGAAAAAAAGTGTTGCGTACGAAAACATCACGGACCACGCCCACACTCCCTGCACGCCGCCCCTACGACGATGACGTGCTAAGCAGCGCCGTACAAGGTCTTCTCAGTGGAAAATACAGCGCAAATACCCGCAAACCACCAGACCAATACAGTAGCAGTGCGACATCGAGCACCATACGTACAAGATGTAATCGCCCTGCGATGGGCGGCAAACGCCTCAACGCCCACCTTACAAATGCTCTATTGCAAGGTTTAGAAATGGACAAGGATTTGTCGGGTGATGAATGCAACGCTGCTGATGCTAGCACGCTCATGACTGGTGGTCATGGGAGTAACGCTTCAACACCACAACCAGAACCCGCCACACATTCAGCACTCGAAGAGCTCGCCAATCGTCTAAGCGCCACGCATTCGATACGTAAGCTGTGCGTAAATAATGGCAGCAGCGATGCGGCGAGGCGCGAAAGCGACATTGACGCTGCAAACTGCGCCGTATTGTCTCCCAAGCCGAATGCATTGTATATAGATGCGGCTAAGCGTGATACTGGTACACCTTCGAGCAGTGCTACGCCGCAACCGCAGCAATCACCGCAGGCAGGACTTGATACAACTTTTGCAATTTTGCAGGCGTTCTTGTTTACTCTCACCAGCTTTGGCGCTTTGCAACAGCGTGCAGACCAGCCCATAACACTGCGTGATCTTGTAGCCAATTTGAAAGATATGTTGGAAGCGCATACAACGGGTGATTTGAATGTGGAAGGTCTTATCAATAATGGAAAGCCAAATATAATGGATCAGCCATTGTTGTTGCAGAAGCTGCAGCAGCAGACCTCAGCATACGCGGCGCAACGCTTGCCCAAATCAGATACTCCAGAGACGACAAGTTCAATTGACACGCACGAACCGATTGGTGAGGATCTGGCTTCGTCGATTCTTAAGATTCCGTCCTATAAGCCCGCGGCAAGCACGCCCACTCCAACATCGGGTGCAGCACGCACCTCCTGCTCCCCATCTTTGCTGTGTAACAACTCCAACGCCAATTCAATGCCAAATCCTAATGGCGATAGCCCCCATTCAGCGCCCTCACCACGTATGGCCAGCTCAATGTTGGCCGCTGCAGTGGCGGCTGTAAGCAACAATGGCACCTCGACTTCTGCCGGCCGTCAGGGCAACGACCTCTCAGTGATTTCGCCCCCGTTGCTACAACACCGCCAATCACCACCGTCGTTCAGCTTTCGTGATGTGATCGCGAGAGGCATCCACCGCACTATGAATGAGCAAGCGAACCAAGAAGCGCATGCGGCAGCAGCTGCTGTTGCCGCAGCCTCAGCACCTATGCTCGGCTTGTGTTTAGAAATGGAGCGCTCAGCCAATAACAACAGCGGTGGCAGTGCAGATTACAAGAAACCAACCATTTCAGTCGTGAAGAATATAGGCGGTACTGATACAACTCGTTTTGGCGCTGCACCCAATCTATTGGCTGGCACCAGTGCGGCTGGCGCGCCTGGTAGTAGCTCCAGCGCGCACAACTCGCACGGCTACCACCAGTCGCATTTGCATAATGCCCATCACCATCACTCGCACCACCTTAGCCGCCAAGATGCCGCAGCACTTGCCGCCGGTAAAGGTACCCGACCCAAACGTGGCAAGTATCGCAACTACGACCGAGATAGTTTAATTGAAGCAGTGCGCGCTGTACAGCGTGGCGAAATGTCGGTGCATCGTGCAGGCAGCTACTTTGGCGTGCCGCACTCCACGCTCGAGTACAAAGTTAAGGAGCGGCATTTAATGCGACCGCGCAAGCGTGAGCCCAAGCCCCAGCCTGGTCTGGATGGCAGCAGTTCGACCTCGGCCAAATCAAACTCCAACATTCCTGGTCACCACAATAATCTTAGTAAAATGAAACTGGGCGGCGCTGGCAGTGGCAGCTCAAATTCCAAGCTAAACGAAACACTTAAGGGCAACAGCAACTCGGCATCGGCAGCGTTCCCCCCCACAGCACCGAATGGCATGAAATTGCCCATTTTCGATCCCATGCAATATCCGGGTCATCTATTTTGGAATCATTCCCCAGCTTTTAGTCCAATGCACATGGAATTCAATCGCAATACAGTGGCGGCGCAAAATGCAAGCGCTGCACAACGCTACACTGAAGAAGCGCTGCGTGGTGGCGCATCGGCAGGTACGCCATCCAATGCTAACAGCCCCAGTCCTATAGCCAGTCCGCTATCCGCTGCTGCAGGTCATGCGCTCAATATGAAGAGTGCGCGCGAAATTGCTGAGAATTTATATGAAAGTGGCGGCGCTAATGGTTCCTCAATACTCGACGGCATCATACGAAAGACGCTCGATCGCAAGAGTGCCGATGTTGGCCCGCCACCCAGCGTTCCCACCGGTGGAGCATTACTGGATCAATTGTTGGTCAAGAAAAGTGCGCCTCCACCGTACGTTAGCAACAACATCAACGATCATGTCTCAGCCTCGGCTATGAGTTTAGGTACCAAACGCGCCGGCAGTCCGTTGCCCTATACGGAAATTAAACGCGAACGTGGCAGCCCGCAGCATAGCAGTGGCGACGACGATGATGACGACGCCTCACGCAGTGGCACTGAGGAGATGAGCTACGagcataataacaacaacaacagcaagagtAGTTTCAGCGGCAATAATGAATTGCTACTACAGCATCAGCACTTGCACCAGCAACAACGCAGTCGTAGCCGCAGCCGATTAACCTCACACGACTCCGCCGAAACCGATACGAGTAGTATACCCAGCGATCTCATGCCAAatcacagcagcagcagtaaacTAGTTGCGGATCTAAATGGAAGTGGAGGCAGTGCGGGAATGAGTGGGTTGGTGCCCAAAGTGGAACCACTGCTGGAATTAGGGCGTGTGCCACCGGCTTTAGGTGGGACCTCAATACTACAGGAAAAGTTAGCGCAAATCAAGGCAGAACAAGAGAATGAAGAAAATTTATAG
- Protein Sequence
- MKRTDECANEPTSKRINIPTNVRKKVLRTKTSRTTPTLPARRPYDDDVLSSAVQGLLSGKYSANTRKPPDQYSSSATSSTIRTRCNRPAMGGKRLNAHLTNALLQGLEMDKDLSGDECNAADASTLMTGGHGSNASTPQPEPATHSALEELANRLSATHSIRKLCVNNGSSDAARRESDIDAANCAVLSPKPNALYIDAAKRDTGTPSSSATPQPQQSPQAGLDTTFAILQAFLFTLTSFGALQQRADQPITLRDLVANLKDMLEAHTTGDLNVEGLINNGKPNIMDQPLLLQKLQQQTSAYAAQRLPKSDTPETTSSIDTHEPIGEDLASSILKIPSYKPAASTPTPTSGAARTSCSPSLLCNNSNANSMPNPNGDSPHSAPSPRMASSMLAAAVAAVSNNGTSTSAGRQGNDLSVISPPLLQHRQSPPSFSFRDVIARGIHRTMNEQANQEAHAAAAAVAAASAPMLGLCLEMERSANNNSGGSADYKKPTISVVKNIGGTDTTRFGAAPNLLAGTSAAGAPGSSSSAHNSHGYHQSHLHNAHHHHSHHLSRQDAAALAAGKGTRPKRGKYRNYDRDSLIEAVRAVQRGEMSVHRAGSYFGVPHSTLEYKVKERHLMRPRKREPKPQPGLDGSSSTSAKSNSNIPGHHNNLSKMKLGGAGSGSSNSKLNETLKGNSNSASAAFPPTAPNGMKLPIFDPMQYPGHLFWNHSPAFSPMHMEFNRNTVAAQNASAAQRYTEEALRGGASAGTPSNANSPSPIASPLSAAAGHALNMKSAREIAENLYESGGANGSSILDGIIRKTLDRKSADVGPPPSVPTGGALLDQLLVKKSAPPPYVSNNINDHVSASAMSLGTKRAGSPLPYTEIKRERGSPQHSSGDDDDDDASRSGTEEMSYEHNNNNNSKSSFSGNNELLLQHQHLHQQQRSRSRSRLTSHDSAETDTSSIPSDLMPNHSSSSKLVADLNGSGGSAGMSGLVPKVEPLLELGRVPPALGGTSILQEKLAQIKAEQENEENL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00091092;
- 90% Identity
- iTF_00081118;
- 80% Identity
- -