Alud028114.1
Basic Information
- Insect
- Anastrepha ludens
- Gene Symbol
- kn
- Assembly
- GCA_028408465.1
- Location
- JAPVRI010107709.1:1-10479[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-114 2.8e-110 370.8 0.0 210 385 1 205 1 207 0.99 2 2 2.6e-10 3.2e-06 27.2 14.5 422 514 208 307 204 320 0.66
Sequence Information
- Coding Sequence
- GTTGTCATCTCCACTCAAGTGACCGTTGACGGCCCGCTTTTAGCCATATCCGATAATATGTTCGTACATAACAATTCGAAACATGGACGTCGCGCTAAACGCTTGGATACCACGGAAGGTACAGGAAACTCCTCCCTGTCCTTAACGGGTCACCCACTCGCGCCTGACAGTACCTATGATGGTCTCTATCCACCATTGCCTGTGGCCACGCCCTGCATCAAAGCGATTTCGCCCAGCGAGGGTTGGACTTCTGGCGGCGCCACAGTCATTATTGTTGGTGATAATTTCTTTGATGGCCTCCAAGTTGTCTTCGGCACAATGCTCGTTTGGAGCGAACTGATTACATCGCATGCCATTCGGGTGCAGACACCACCACGCCACATACCCGGCGTGGTGGAGGTGACTTTGTCATACAAGAGCAAACAGTTTTGCAAAGGTTCACCGGGGCGTTTTGTTTATGTTTCAGCCCTCAACGAGCCAACCATCGATTATGGTTTTCAACGCCTACAAAAACTCATACCACGTCATCCTGGTGATCCGGAGAAGTTGCAAAAGGAAATCATACTCAAGAGAGCAGCCGACTTAGTTGAAGCCTTGTATTCGATGCCAAGATCTCCCGGCGGCTCAACCGGCTTCAACTCCTACACCGGCCAGCTGGCTGTGAGTGTTCAAGATACCGCCGGCCAATGGACCGAGGACGATTATCAGCGTGCACAGTCGAGCAGCGTTAGTCCACGTGGCGGTTATTGCAGTAGCGCTTCTACGCCACACAGTTCGGGCGGCTCTTATGGCGCTTCGGTGGCCGCTAATGGTTATGGACCCACCACCAATATGGGTACGTTATCCTCTTCACCAGGCAGTGTTTTCAACTCCACCAGCAGCAGTGCCTTTTCGCCATTAATTTCAACAGTGTCGTCACCGTGGCATCAGGCGCTAGTGCAACACCACCACACACATCCGCACCACTACCATCATCATGCGCACCAGCCGTGGCATAATCCAGCTGCCTCAATTGCAACGGCCGCAGTGTAG
- Protein Sequence
- VVISTQVTVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSLTGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTSGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYTGQLAVSVQDTAGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGASVAANGYGPTTNMGTLSSSPGSVFNSTSSSAFSPLISTVSSPWHQALVQHHHTHPHHYHHHAHQPWHNPAASIATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01045258;
- 90% Identity
- iTF_00893648;
- 80% Identity
- iTF_01189168;