Afra013212.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anastrepha fraterculus
Gene Symbol
gata5-a
Assembly
GCA_037575425.1
Location
JAYXIM010017186.1:115478-144184[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.9e-16 2.4e-12 47.5 5.0 1 34 327 359 327 361 0.97
2 2 1.8e-19 8.8e-16 58.5 3.8 1 36 381 415 381 415 0.97

Sequence Information

Coding Sequence
ATGCAAACATGCAAACTCAGGTGTTTTCTGTGCCACCGTGTGCTCTTGCCACGTCCCCCACCCTTGCAGCAACCACctgttgctgttattgctgctgtggcgTATGCGCCGCGGCTTAGCGTAGTTCCAAATGCGACGTGCGGCAACTCTGATTCTCAGCAGAAGGTGTCAAGAGGCAGCAGCAAGCAGCAATTCTACTCCCAACGGCCACTTGCTCGTAATTTTAGTATTTCAACAGCAAGCTCAGTCTACCCCGGATCGCTGTTAACACCGGCCACCAATGGCATGCAACAGTATGGCATGCAGCCAAGCAACGCAATTTCAGCAGCATCAGTCACTAACGTCTCATCTGGATCCCCATCCCATCAGCCAGTGCATTCGGCCGCCTCCACGCCTGGTGCGCATTCAACAAATTCTATCGTAGCAGCGGCTACCACAGCACTGGCCACCGGTTCCGGTTCAAACTCCATCAGTAATGATGACTACGGCTCACCGAAGAGCAACAACAGTAGtaatggtggtggtggcggtggtggtagTGGagcgaacaacaacaacactgctGGTAGTGGTAGCAGTGGGCCGTTGCCAGCATTTCAACGCATCTCCAGTTATGGTGGTGGTGCGGGCGGCGCAGCTGGGGTTGTTGGTGTGGCGAATGTCAGCGGCAGCGCAACAACGGTTGGCAGCGGCGCCGATCGTTACACATCGTTGACAAATTATCGCACAAACGACACATGGTCAGGTCATTATGAGGCAATTAGCTACGCGCCCACATCGGTCGTAACGAGTGCCGCCGGCCTGGTTGGGAATACGAATGTAATACGCAGCTGCAATGGGCGTGCGGGCCCAGGCGTTGGGGTGGTTGGCGTTGGTGTAGAGGGCTCTGCTTCAGCCAACTTGGCCGCACATTTGAGTGCATCCGCATCGTTGACAGCAACATTTTACGATGCCGATTTTATCACCGATGGGCGAGAATGTGTCAATTGTGGTGCGGTTTCAACTCCATTGTGGCGCCGTGATAATACCGGACATTATTTGTGCAATGCGTGCGGTCTCTATAATAAAACGAACGGCATGAATCGTCCATTAATAAAACAGCCTAGAAGattgAGTGCTTCCCGTCGTGTCGGTCTCTCCTGCTCAAATTGCCTCACAACGCATACTTCTTTGTGGCGTCGCAACCCCAACGGTGAACCCGTCTGCAATGCTTGTGGACTCTACTTCAAATTGCATAGCGTGAAACGTCCATTGACCATGAAGAAGGACACCATACAAACTCGCAAGCGTAAAGCGAAGGGCACTAAAAGCGAAAAGCCCAGCAAAATCAGCAAATTACATGCAAACTCCAATCCATCCACAAATACCAACAATGAACTAAAACATCTAACAACTAacttgcaacagcaacaacaacaagaacaacagcaGCTGCAGCAACAAATGCAAACCACGCAATTGTTGCAACTGAAACAGGAACCACAGATGAACAACACTGTAGTTCAACACACGACGCTGATGTCGCCAACAACAAATGATGGTAGCATTTCACCGACGGACACCAAATCACCGCTCATGGGCTTGCTACCTTCCTCACCGCTAACgccacagcagcaacagcagttgGAAGAGGTGACTGCAATGCAggagcaacaacagcagctgcAGCACTCATACAATCAGAAAATGTCACCAAtgacacacatacactcaccaATAATGTTCTCATCCTCATCACCCACACATAATGGGCATTTgaataacagcaataacaataacaacaataataataatacaacatatagcaataataataataataacaacaacagcaatcatgttataaataacaacaacaatcatattattaataacaacaacactttAAAGCTTATGCAGAAACAGCTGCAGACTCACCAGCAACAAATGCAGACACAGCAACAGCTCGCGTCATCCTCACCGagtcaacagcagcagcaccaacagcaacaacaacatcaattaATGGCACAGCAACTTATGCATCTGATGCCGCCACACTCTTCCCCCTCAGCATCGGTATCAATGCCACCAACACCGGTCACACCATCCACACCGACGACAACActgcaacaacaccaacagcaacagcaacagcaacagcatcaCCATCAATCGACGCAGCAACAGATATTTCAACAATtgacacaccaacatcagttgcaacATGGACAACAGCCGACACATTTATCTAATCTTTGCAACTCTCTGCACTATCATCAGCATTacctgcagcagcagcagcagcaaatacAGAAACAACAACACCTTGATCCACAAAGTCCAGCCGGTTCGGTGTCGCCAGCGCACTCGAACTTCGGCGAATTGGTGCCGATACATGAAGATTCCATTAAAATCGAGCAACTGCAGCAACATCACCGGCAGCATCAACACCAGCATTCACATTTGCTGCAACAGGATGTGGCACTCAGCCGCAGTCCATCGTTAGAGGAGGATGAAATGCTGTTTgagcttcaacaacaacaacaacaaggtaaTACACAATCAATTGCACTGCACATGCAACACCACCAAGACTTGCATCAACATCACCAACCAAGTCTATTCGAGTTGCACGAATTCGAACGCAAGTACGAACGTGAGACTGTGGTGAAAACCGAGTAA
Protein Sequence
MQTCKLRCFLCHRVLLPRPPPLQQPPVAVIAAVAYAPRLSVVPNATCGNSDSQQKVSRGSSKQQFYSQRPLARNFSISTASSVYPGSLLTPATNGMQQYGMQPSNAISAASVTNVSSGSPSHQPVHSAASTPGAHSTNSIVAAATTALATGSGSNSISNDDYGSPKSNNSSNGGGGGGGSGANNNNTAGSGSSGPLPAFQRISSYGGGAGGAAGVVGVANVSGSATTVGSGADRYTSLTNYRTNDTWSGHYEAISYAPTSVVTSAAGLVGNTNVIRSCNGRAGPGVGVVGVGVEGSASANLAAHLSASASLTATFYDADFITDGRECVNCGAVSTPLWRRDNTGHYLCNACGLYNKTNGMNRPLIKQPRRLSASRRVGLSCSNCLTTHTSLWRRNPNGEPVCNACGLYFKLHSVKRPLTMKKDTIQTRKRKAKGTKSEKPSKISKLHANSNPSTNTNNELKHLTTNLQQQQQQEQQQLQQQMQTTQLLQLKQEPQMNNTVVQHTTLMSPTTNDGSISPTDTKSPLMGLLPSSPLTPQQQQQLEEVTAMQEQQQQLQHSYNQKMSPMTHIHSPIMFSSSSPTHNGHLNNSNNNNNNNNNTTYSNNNNNNNNSNHVINNNNNHIINNNNTLKLMQKQLQTHQQQMQTQQQLASSSPSQQQQHQQQQQHQLMAQQLMHLMPPHSSPSASVSMPPTPVTPSTPTTTLQQHQQQQQQQQHHHQSTQQQIFQQLTHQHQLQHGQQPTHLSNLCNSLHYHQHYLQQQQQQIQKQQHLDPQSPAGSVSPAHSNFGELVPIHEDSIKIEQLQQHHRQHQHQHSHLLQQDVALSRSPSLEEDEMLFELQQQQQQGNTQSIALHMQHHQDLHQHHQPSLFELHEFERKYERETVVKTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-