Basic Information

Insect: Anastrepha fraterculus
Gene Symbol: -
Assembly: GCA_037575425.1
Location: JAYXIM010017155.1:42496-45411[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.027 3.7 9.4 0.3 1 23 275 297 275 297 0.98

2 7 0.00012 0.016 16.9 0.9 2 23 646 667 645 667 0.96

3 7 0.0007 0.096 14.4 0.5 1 23 673 695 673 695 0.98

4 7 0.00071 0.097 14.4 0.5 1 23 701 724 701 724 0.94

5 7 2e-06 0.00027 22.5 2.3 1 23 730 752 730 752 0.98

6 7 7.8e-06 0.0011 20.6 2.2 1 23 758 780 758 780 0.98

7 7 0.00072 0.1 14.4 2.2 1 23 786 808 786 808 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.027	3.7	9.4	0.3	1	23	275	297	275	297	0.98
2	7	0.00012	0.016	16.9	0.9	2	23	646	667	645	667	0.96
3	7	0.0007	0.096	14.4	0.5	1	23	673	695	673	695	0.98
4	7	0.00071	0.097	14.4	0.5	1	23	701	724	701	724	0.94
5	7	2e-06	0.00027	22.5	2.3	1	23	730	752	730	752	0.98
6	7	7.8e-06	0.0011	20.6	2.2	1	23	758	780	758	780	0.98
7	7	0.00072	0.1	14.4	2.2	1	23	786	808	786	808	0.97

Sequence Information

Coding Sequence: ATGGATCAGCCGCCGCTACAGCAGGCGCTAGCCCGCAAAGAACCCGAATTCATTGACCATGATCTTCCTTTGCAGTCGCTACTCACACCTACCTACATACGTGATTCCAACAACTTCATAATCGATTTTATAGAATCCACGCCATTGGTATTTCCCAATAAAACCGTTGTGCATGTGTCCGGCAACAATGAGAGCACACACACTACTTCTGCAACAAACGTAACCAGCACAGTCGGCGATGGCAGCTACCACGTGAAAGAGTCTGATGCAGTTTCAATCACACCCGATTTGCATTTTCCCAGCTCTATTTTCCACTACCGCCCCACGCAAAGTGATGTAGCAGCCGGTAATGTTGCGAGTGTGGCGGAAGCGGCATTGAATGCATTGAATACGTCAGCGCAACCAACAGCTCCGCTTCCTTTAGTAATCGGTGGCAGTGCGAACAACTCTGGTAACAATGCCGCTACATTCCATGGCAAACACACGGAATATATAGGATTGAATAGTGACTTTCTCGCCGGTAGTGTGGGCAAAAGCTATTGCAATGACAATCAGGTGGTGCATGAGGCTGGTGAGGATGCCGCCGTGCAAGAGTTCCTTCTAACCGATGCCAATGTGAGTTTGGACGATGCCGCAGATCTAATGAATGCCAGTGCTGATGTTTTGTCTGCACAGCATGTGTCCATCGCACGCAAAGTTCTGCCACACAAGAAACGTATTTCTCGCAAGTTACGCGTATCGCAAAGCGGTACGGACAATGTTTTGCCCAAACCGCTGGGTGGAGTGCACAAAATGCGGGAGAAGCGGCTGAAAGTGCCAATATATAGTTGTGAGATTTGTGGCAATATATCGGACTCGCAATTGCAGTTTTTTGCCCATCTGAAGCAGCACTATGAACCCACTACGCCGGATACGATATTGGCGGCGATGAAGACATCTCTGGTAGATTTGGAGCCGCAAAAAATGTGTAGAGTGGATAAAAAAtctCCCAATGATAACGTGGACCAAGTCTTCAATGACGTGCATTTGAACTTCCCCGATTTTTCGGACGTTGACGACGCACCCATTCGTCATGTTATGGAACCAGATGATGAGGCAAATGAAATCAGTTATGTGGCTCGAACATCATCACCCACGTTGAAGCGTACCGTCGAAGTGGAGTTTAGCGACAGTGAGGATATGCTAGAAGGCATACGCAATGTTGTGGATAAGGTGTCAATTGAAGACACTTGCGACGCGCTTGATTTGATGAACTCCAATGGTATGCGCGCTTCATGGTTCAGCAACGACAACTTTAGTGGTATCACTTTCAAGAATAAACCATTCAACGACGTTTCCTTTACTGAACCGCTTCCTCCCATGCCTATGATGGCTAGCAATTCTTTGACAAGAGGTACACCGCCAAAAGAACCCACGCCGCTGCCACCGGCTGAGAAATTACTCTCGTACCAAAAGTCAGAtcgtagaagaaaaaaaatcgttttagcGTTACCACCAGACGACGTTGGCGGTGGTGTCAACGTTGTCGATGAAGCGGAAACAGATCGTGGCACATTCTACAATGGCCCGTTATCCCTCATACGTTTACCCTGCGTCGATACCGACGATCGACAACTGCCGTGTCAGTCGCCTCATCAATCAACAACGCCAACCGATTTACTCCAGCCTTTACGGGTGTCAGAATTTGATTTGCCCGAACCACAGGCAATACCCGACGAGAATGCGCATTTAACGGCTATTGGGCTAGCACAAGTGAAAGGTGAAGCCGGTGTGGACGATAGTCTGGTGGTGGTAGAAAATGAATTTTGCAAAGAAGAACCACAGACGTATGACTTTGAAGACAATGATGCATGCCTTGACGAGGGCGACCAGGGAATTGAATCGTACGCGCCCAGTCCTCTAAACGACGATCTCGAAAGCAACTTAAAAAAACTCATATGCACAAAGTGTGGACGCAATTTCAATTCGACCAATGCGCTCAAATATCACGCGCGCACACACACCGGCCTACGTCCGCATAAATGTGATGTGTGTGGCAAATCGTTCCTGGCTTTAAATGCGCTCAAAGCGCACACGCGTGTACACACCGGCGATAAGCCTTTCAAATGTGAGGTTTGCCAACGTGACTTCGGGCAATGGGGTGACCTGCAGTACCATTTCATATCGAAGCACACGGAGGACAAGAATCATCAGTGCGAGTTCTGTGGCAAGGCGTTTTCGCGCAGATACTCATTGGTGCTGCATCGGCGCATACACACCTGCGAACGTAATTTCAAGTGCGAATATTGCCAAAAAACATTTCGTGCGAGCGCTTATCTGCAGAATCATCGGAAAATCCACACCGGTGAAAAGCCACACGAGTGCGCAGTTTGCGCGAAAAGATTTCGCATGCACGGTGACCTGCGCCGCCACGAACGCATTCATCAGCGTCCGCGCGCTAAAAAGTCAGCCAAACGCGCTGTCAGCGCAAAATAG
Protein Sequence: MDQPPLQQALARKEPEFIDHDLPLQSLLTPTYIRDSNNFIIDFIESTPLVFPNKTVVHVSGNNESTHTTSATNVTSTVGDGSYHVKESDAVSITPDLHFPSSIFHYRPTQSDVAAGNVASVAEAALNALNTSAQPTAPLPLVIGGSANNSGNNAATFHGKHTEYIGLNSDFLAGSVGKSYCNDNQVVHEAGEDAAVQEFLLTDANVSLDDAADLMNASADVLSAQHVSIARKVLPHKKRISRKLRVSQSGTDNVLPKPLGGVHKMREKRLKVPIYSCEICGNISDSQLQFFAHLKQHYEPTTPDTILAAMKTSLVDLEPQKMCRVDKKSPNDNVDQVFNDVHLNFPDFSDVDDAPIRHVMEPDDEANEISYVARTSSPTLKRTVEVEFSDSEDMLEGIRNVVDKVSIEDTCDALDLMNSNGMRASWFSNDNFSGITFKNKPFNDVSFTEPLPPMPMMASNSLTRGTPPKEPTPLPPAEKLLSYQKSDRRRKKIVLALPPDDVGGGVNVVDEAETDRGTFYNGPLSLIRLPCVDTDDRQLPCQSPHQSTTPTDLLQPLRVSEFDLPEPQAIPDENAHLTAIGLAQVKGEAGVDDSLVVVENEFCKEEPQTYDFEDNDACLDEGDQGIESYAPSPLNDDLESNLKKLICTKCGRNFNSTNALKYHARTHTGLRPHKCDVCGKSFLALNALKAHTRVHTGDKPFKCEVCQRDFGQWGDLQYHFISKHTEDKNHQCEFCGKAFSRRYSLVLHRRIHTCERNFKCEYCQKTFRASAYLQNHRKIHTGEKPHECAVCAKRFRMHGDLRRHERIHQRPRAKKSAKRAVSAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00083372; iTF_00082416;
90% Identity: iTF_00083372; iTF_00082416;
80% Identity: -