Basic Information

Insect: Anastrepha fraterculus
Gene Symbol: -
Assembly: GCA_037575425.1
Location: JAYXIM010000002.1:153171-156930[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.7 3.7e+02 3.2 0.6 1 23 240 263 240 263 0.90

2 9 0.54 75 5.3 5.2 2 23 352 374 351 374 0.95

3 9 0.00024 0.033 15.9 0.5 1 23 783 805 783 805 0.97

4 9 0.00046 0.063 15.0 1.9 1 23 811 833 811 833 0.98

5 9 0.0002 0.027 16.2 0.9 1 23 839 861 839 861 0.99

6 9 5.2e-07 7.2e-05 24.3 0.8 1 23 867 889 867 889 0.99

7 9 2.5e-05 0.0035 19.0 2.4 1 23 895 917 895 917 0.98

8 9 0.00027 0.037 15.7 4.8 1 23 923 945 923 945 0.99

9 9 2.5e-05 0.0035 19.0 3.6 1 23 951 974 951 974 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.7	3.7e+02	3.2	0.6	1	23	240	263	240	263	0.90
2	9	0.54	75	5.3	5.2	2	23	352	374	351	374	0.95
3	9	0.00024	0.033	15.9	0.5	1	23	783	805	783	805	0.97
4	9	0.00046	0.063	15.0	1.9	1	23	811	833	811	833	0.98
5	9	0.0002	0.027	16.2	0.9	1	23	839	861	839	861	0.99
6	9	5.2e-07	7.2e-05	24.3	0.8	1	23	867	889	867	889	0.99
7	9	2.5e-05	0.0035	19.0	2.4	1	23	895	917	895	917	0.98
8	9	0.00027	0.037	15.7	4.8	1	23	923	945	923	945	0.99
9	9	2.5e-05	0.0035	19.0	3.6	1	23	951	974	951	974	0.98

Sequence Information

Coding Sequence: ATGATGATCAACACACTGCTGGAGCATGTTCCCATAAAACTGGAAGTGCCGGATAATGGCGACGACAGAGACGCAGAAAACAATGgcaaagagaaaaacaaaaatttgaaaacgaaTGGAAATAATGCAGTAGTTGAGGAAGAGGACAGTGGTGGTGATGAGGACGATGACGATGAAGATTCTGACGAGGATGACTCGGAAACGGATCTGCTTGAGGAAGATGATGACGAGACACTGGTGCCCATAAGTAGCGATGAAGAAGCTGAATTGGAGGCACAACGTATAATATTCCACGAACTGATCCAAAAGAGTTTGCAATTGCCAACGGTTGCAGCTAACAGCTCAGCAGGAAGTGGTAAAAAAGTAAATGCATCAAAAATAATTCGTGAACGTAGTGTTTCGAGTTGTGCCAGCGTTAGTAGTAAGACTTCAATTGTTTCCTGCTCTTCTGCCTCAACCAATGAAAGCAAGCATTCAAAAGACGCAGCGGTACCAAAGCAAAAGCAAGATCCCCCAATTAAACAACATGTAACAAGCAGGATTTGTGGAAATGCAAAGAACGCCGAATCGGAATCGGAACAAGAGGATAGTGCTAAGGGTTCACCACGAACGCGTGCATCATCAACTTGTTCCGTGGCATCATCGCTAGTCACACCCTCGTGCCAAACGGAATCCTGTGGCAACATTTATGTGTACgaagaacaacaaaaactcatttttaatTGCAGTTTTTGCGATTTACCTTACGGCGACATGTTAACATTCGCAAGGCATTTACACGATGCACACAAACTCTTCCATGAAGAAGAAGATGCGACAATACCAATGGCGGCGCGTAAAAGTGCACGCAACCTGTCGAATCAACAGGCAGATAATAAGGCGCAAGCGCAGGACAACCCAAATATTGTGAGAGTAAAAACGGAATTCAATGCTTGTCAGGACAAAGTGTGCGATGACGCCTCAAGTACGCATTCAATGTCTCCAGTTCCTGTGGATGCGACACTTGAATCATGCGGAAAtgtctttattttaaatgacaaaaaactTTTCCTAATTTGTGGTCACTGTGAATGCAAATATGCGACATTGGAGCTGTTTCATAAACATTTGCGGCAACAACATAAGTTGTTTACTGGGCCAGTCAAAGAAATTAATGTTTTGCCCAAGCAGGAGATTAAGGTCGAAGCGACTGACGAAATGGCGCAGTCAAGCCGAATCAGTGCAACGGCCATTGAAAGCGAAAAGCAGCGTAAAGCAAGTGTGGAAGCCATGACTGATTCGCCAGTGATGGTAGTGGTGCCAATGGCGCAGAACTTAGATAACAATGATATTTTAGCGACGACGGTAGGAGTGCAGATACCAGAAACGCCACCTCCGGACGAAGAAAAATCATTGGAGAAATCTAAAGAAAATACGGTAAATGACGAGGCGGTAGCAATGGTTGTTGAAGATACTGTTAtggaacaacaacagcaaacaatcTTGGAAAGTGAAAAAGTAGGGGAAGAAGTTTGTAAACAGTTGTCAACAAGTGAAATACCTCCATCGGCTGAGGAGCATGCGCAATTGCCAATCGAACAACAGGTGGAAGAAAATGAGCAGTCTACAACGGCAAGTCCAGAAAGACCAGAGGAGGAAAAGTtagtagtagaggaagagaaagaagtTGGCGAAGAAAAATCTACGACAAAACGTAAAAGAAAACGCAAAGCgGTATTTTCAAGGCGTTCACCCCCAAAGAGACGTGCCGCTGCAACGAACAAGCTTAACTCAGCAAACTTGTTACCAAACGATGAAGACATTGCCAATGTCGCTGTTCAAACAACCAACGAAGTTTGTTCTTTACCGGTGAAAAATGttgatgctgatgctgatgcaaatatagaaaatatggTCGAAGTAGATTCTCAAAGACCTGAAGAAGCTGTTTCTGTATCGGCTGACGAAACTAGAAAGTCTATAGAAATTCGTATGCCCCACGAAGAACCTATAGAAATTGCGAACAATGCGCACACTCATACGACTATAGAAGTTCCAGGTGAAAGTATTGCAATTGTAAACTCTGAAGACGTCAAGAAAACTAAAGGTAAGGCCGCTACTAAAAGTCAGATTCGTCCAAAGTCCACAGCAAAGAGGACacgtaaatgcaaaaaatcTGACAACGAGCCCAAACAATCACCTTTACCTACTAAGGCCGGCCCGTCATCAAAGACTTCGTCGCCAGTTTCTTCTACGAATTCATCGACTGATGTTGCTGAGACAAAAACTGATACGTCCGTGGTGTCTAAGAAATCTGTTTCAGGACCGATGCGAACCACCTCCTACTCAGAGACTCATAAGTTACGTTACGCCTGTAACCAGTGCCCAAAATCATTCAGCAAGTCGCCGCGTTTAGCTGAGCACAAGCGTCTGCATACGGGCGAGAAACCGTTCAGTTGCGACGAGTGCGGCAAAACGTTCCGCATCAAAAGGCGTCTCAGTGAGCATAAAATGCGTCATCTCAAAGTGAAAGCGTACAAGTGTGAAACTTGTGGTTTACCGGTGGCCACCAAGCAGGACCTCAGACTTCATCAACGCCATCACACCAATGATCGTCGATACACTTGCACCGAATGTTCCAAAGCCTTTGTGCGTAGTTCTGATTTGAAAATACACAAAAGAGTTCATACGGGCGAGAAGCCATTCGTATGCGAGATTTGTCAGAAAACATTTCGAGCCAACCAGAATCTGCACGTGCATCGGCGCTCGCACATGGGTGAAAAGAATTATAAATGTGATTATTGTGACAAACGCTTCATGCGAAATATAGACCGTAAGGTGCATCATCGTACACATACAGGTGAGAGACCATTCAAATGTGAAATTTGTGGACGTTGCTATTCATCACGCGCTCATGTACGTTCACACATACAAAGAGAACATGTGGAGAATGCAGGTGAGGCGAAGAGTGAGCGCAAGAAGTCGGAACGTAAAACGAAACCACCCGAGGTGAAACAGCAACAACTCATTGATGAATTACAAGAGCAAATACTGCAATGTTTGAAAACTGATGATTTGGAGGAGGAAGATATTTTGCCAACGACGAAGAATGAAAAACCcactgaaataaaaaagcagaaacGTCAAAAATCTACTCCAAGGTCTTCGCCAGCACTAAAGAAAGCAGTGGATGTCAATTTGTCGACACCTTCACCACGACAACAAGCACAAAACTCCCCATCGATTGGGGTGCAACAGGTATCCGTAACTGTGTCAATGCAAGTGCAAAAGGATGTGAGCATAGGCGATGAGCCCATGCCGGAGAAAGAGAATGCCGCCAAAATCGTGGGCGGTGTCGCAGCACCACTGAACAAAAACGCAAAGAATGAGCGTAAAATTACGAGCTATTTCACTGTGTTGggacaaaaaacagaaatttaa
Protein Sequence: MMINTLLEHVPIKLEVPDNGDDRDAENNGKEKNKNLKTNGNNAVVEEEDSGGDEDDDDEDSDEDDSETDLLEEDDDETLVPISSDEEAELEAQRIIFHELIQKSLQLPTVAANSSAGSGKKVNASKIIRERSVSSCASVSSKTSIVSCSSASTNESKHSKDAAVPKQKQDPPIKQHVTSRICGNAKNAESESEQEDSAKGSPRTRASSTCSVASSLVTPSCQTESCGNIYVYEEQQKLIFNCSFCDLPYGDMLTFARHLHDAHKLFHEEEDATIPMAARKSARNLSNQQADNKAQAQDNPNIVRVKTEFNACQDKVCDDASSTHSMSPVPVDATLESCGNVFILNDKKLFLICGHCECKYATLELFHKHLRQQHKLFTGPVKEINVLPKQEIKVEATDEMAQSSRISATAIESEKQRKASVEAMTDSPVMVVVPMAQNLDNNDILATTVGVQIPETPPPDEEKSLEKSKENTVNDEAVAMVVEDTVMEQQQQTILESEKVGEEVCKQLSTSEIPPSAEEHAQLPIEQQVEENEQSTTASPERPEEEKLVVEEEKEVGEEKSTTKRKRKRKAVFSRRSPPKRRAAATNKLNSANLLPNDEDIANVAVQTTNEVCSLPVKNVDADADANIENMVEVDSQRPEEAVSVSADETRKSIEIRMPHEEPIEIANNAHTHTTIEVPGESIAIVNSEDVKKTKGKAATKSQIRPKSTAKRTRKCKKSDNEPKQSPLPTKAGPSSKTSSPVSSTNSSTDVAETKTDTSVVSKKSVSGPMRTTSYSETHKLRYACNQCPKSFSKSPRLAEHKRLHTGEKPFSCDECGKTFRIKRRLSEHKMRHLKVKAYKCETCGLPVATKQDLRLHQRHHTNDRRYTCTECSKAFVRSSDLKIHKRVHTGEKPFVCEICQKTFRANQNLHVHRRSHMGEKNYKCDYCDKRFMRNIDRKVHHRTHTGERPFKCEICGRCYSSRAHVRSHIQREHVENAGEAKSERKKSERKTKPPEVKQQQLIDELQEQILQCLKTDDLEEEDILPTTKNEKPTEIKKQKRQKSTPRSSPALKKAVDVNLSTPSPRQQAQNSPSIGVQQVSVTVSMQVQKDVSIGDEPMPEKENAAKIVGGVAAPLNKNAKNERKITSYFTVLGQKTEI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00083355;
90% Identity: iTF_00083355;
80% Identity: -