Basic Information

Insect: Anastrepha fraterculus
Gene Symbol: RREB1
Assembly: GCA_037575425.1
Location: JAYXIM010049739.1:28521-37024[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.019 2.7 9.9 2.1 1 21 296 316 296 318 0.95

2 14 0.0004 0.055 15.2 0.1 1 23 328 350 328 350 0.98

3 14 3.1e-05 0.0043 18.7 7.5 1 23 356 378 356 378 0.98

4 14 7.6 1e+03 1.7 2.9 2 19 669 686 669 688 0.94

5 14 0.0052 0.72 11.7 0.3 2 21 702 721 701 722 0.94

6 14 0.011 1.6 10.6 0.1 1 23 889 911 889 911 0.97

7 14 3.1e-05 0.0043 18.7 1.3 1 23 921 943 921 943 0.99

8 14 0.00083 0.11 14.2 2.2 1 23 949 972 949 972 0.97

9 14 0.004 0.55 12.1 2.0 1 23 1283 1306 1283 1306 0.95

10 14 0.00012 0.016 16.9 0.3 2 23 1645 1666 1644 1666 0.97

11 14 0.19 27 6.7 6.3 1 23 1672 1695 1672 1695 0.97

12 14 4.1 5.7e+02 2.6 5.0 1 23 1810 1833 1810 1833 0.97

13 14 0.011 1.6 10.6 0.5 3 23 1889 1909 1887 1909 0.96

14 14 0.0018 0.25 13.2 4.8 1 23 1915 1937 1915 1937 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.019	2.7	9.9	2.1	1	21	296	316	296	318	0.95
2	14	0.0004	0.055	15.2	0.1	1	23	328	350	328	350	0.98
3	14	3.1e-05	0.0043	18.7	7.5	1	23	356	378	356	378	0.98
4	14	7.6	1e+03	1.7	2.9	2	19	669	686	669	688	0.94
5	14	0.0052	0.72	11.7	0.3	2	21	702	721	701	722	0.94
6	14	0.011	1.6	10.6	0.1	1	23	889	911	889	911	0.97
7	14	3.1e-05	0.0043	18.7	1.3	1	23	921	943	921	943	0.99
8	14	0.00083	0.11	14.2	2.2	1	23	949	972	949	972	0.97
9	14	0.004	0.55	12.1	2.0	1	23	1283	1306	1283	1306	0.95
10	14	0.00012	0.016	16.9	0.3	2	23	1645	1666	1644	1666	0.97
11	14	0.19	27	6.7	6.3	1	23	1672	1695	1672	1695	0.97
12	14	4.1	5.7e+02	2.6	5.0	1	23	1810	1833	1810	1833	0.97
13	14	0.011	1.6	10.6	0.5	3	23	1889	1909	1887	1909	0.96
14	14	0.0018	0.25	13.2	4.8	1	23	1915	1937	1915	1937	0.99

Sequence Information

Coding Sequence: ATGCTCGCCGCAGCAGCCACTGGTACACAATCATCATTGGAAGCCATCCAATCGAACGTCACAAAGATGGAACGACGTGACTCATCGACGTCGGAATCATCCTTGGAACATTTGGACTTGGGACGTACACCAAAGAAGCTAAGCTCACACTCATCAGCCACATCCACACCACATACGGCCACCAttggcaacaacaacacaaacaaagcCAACAGCAATGAACCAAATACAACAGCAGATGCCACGAGTGCGATCATCACATCATCCTCACCATCCGATCGCACTAGCGCTAGTGGCGCCAAAACATTGCTGTCTCACAAACGTCGTCCGCACGACTCCGACGAGGCTAatgattatgatgatgatgaagaggAGTCGCCAGATGAGCAGCGCAACAAACAGAATGCGCTCAGCTCGCGTTCACAACGTCATCACAAGCGTCGCTGCACAGCGCCGCGTCTAGATAAACGCACCAGCGTTCAATTGGAATTCAATGCGGATGATCCCAATTCACTGCGTAAGAAGTTTCGCTTCAATCGTAGTGCCTCTGCCTCCGAACAAATGACAAATAATAATGAGTCTGGTTTTGTGGACGCCAGCTGTAGTAGTCATTACCTGAATGCATCGGCAGTATCTTTGGTGGCGGCGGCGGCAGCGACGGCAACAACATCTTCTGCATCCGCATCGCTTATGGGTATTAACTCGACGCCACCTCATAATTCAATGTCGGCATCGACCTCAGCTTCTGCCTCGGCGAACGGCTCGCACAGTTCATCGTCGGCTGCTTCGTCGCCGCGTGGCTGTGGCACCGGCTTGGCTGCATCATCCGCCTCGGTGTCCAGCCCAGAATCAGGTATCGGTGATAGAGAACGCGAGGACATGAAGTTTGTGTGCACCATTTGCGATGTGGTGTCGGCGACGCGACACGAGTTCACGAATCACATACGTTGCCACAACTACGCCTCCGGTGATACGGAGAACTACACATGCGCTATCTGTTCCAAGGTGCTCTCCTCCGCCTCATCACTGGATCGGCATGTGTTGGTGCACACCGGCGAACGACCATTCAATTGCAAGTATTGCCACCTCACCTTTACCACCAACGGCAACATGCATCGGCACATGCGTACGCACAAACAGCATCAGCACAATCATCATCATCGCCGCAACTCGAATGGAACAAAACATGCCAGCAATAgtcataacaacaacagcaacaacacagcGTCTAGCAATGCGACTGGCGCGGCTGTGAGTAGCGGCACCGCAACCAACGCCTCCACTAACACCGCCACCAACACCACTTATACGCAATTAAGTCATGGCTTGATTAGTGAAGTTGTCAAAtcatcatcagcagcagcatcagcgGAAGCCATGGAAGCAATGGCAACAGATGCTGGTACGGCCGCTGCGGCTGCCACTTTGATAGGCAACGCTGGCGGTGCAGGTGTTAATGGTAAACGCTTACATAGCAGCGGCGTAGAAAGTTGCGAAAGCGACGGTGGTTGCTCCACAGACACCTCATCAAGTGCCATTAGCATTAGCTCAAATCACAAGcatagcaacaaaaataataacagcgACAACATTAACAATAATGCcgccaacaataacaataaaaatattaacgcAAATCGAAATAGTTTAGATAATTTTAAGCGTAAATTCAGTGATCTACACGATGAAGCCGACGTTGAAGCTGACGACACGACAATGATGTTAGCGTTGAAGCGACGCATGAAGACCACAATAAACAACAACGTCATCGGCGAGGATGTGCATGCCGTTGGTGCTCCTGTCGACCATAAAAATGAAGGCGACGCAGTCGTaaccaaaaaaatgcatacatccTCCTCTGCATCGGCGGCGTCAGATGACGAGGACGCTGAGCATAAGCCACACTTCCAGTACCCGGTTTGTCCTGTCTGCAATGCTGACGAATTTGCGAATATGAACGCTTTGGATCACCATCTGGAGACTGTACATGCCGATATACCAGCGAAGTGTCGTCTCTGCGCGGTGGTGTTCCGCAAACACAGTCAACTGAGCATGCATTTCTGTCCACAGAGTATGCCCGGTAACGTTCAACTGCCGTTGAAGGAGTGCGTGAAGTGTAGCCGCAGCTTTCCCAATAGCAAGGATTTAGAGTTGCACACACGTGAATGCGACTCTGCCGTGGTGCGACAGAAGCGGCGTAGTCGCAGCCTTAGCGATAGCTACACGGTGCCGCCGCTGTCGGAAACCGAAATCGAGGAGAAAACGAGTCTGGCACGCAACAACTTTTTTCGTCAGCTCTATTTGCAAAGTCAAAAACCTTTCTGCGCACAGAGTATGATCTCACTGCCCTCGCCTCTGCACTCGGCTAACGAGGAGGGAGATGCGGGTAATGTAAGCAGCACCGATATCAAACAAGAAGCAGATACTGAGCCGACAGATCAATTGTCGAGTAACTTGCTCTCACAACAATCGCACGACTCGAAAGATTTGGCCGATATCCAATCCATACTCAATATGACCTCGTCATCGTCCACTTCGAATTTTCTGAAGAACTTTGAGCAATCGGTGAACACACCTTCTAGCAATTACAGTTTGGATAAAGACGAGGAGGAGGCACAAGATGCCTTTACATCTGAGTTTCGTAAAATGAAATTGCGTGGTGAGTTCCCGTGCAAACTTTGCACCGCAGTCTTTCCGAATTTGCGCGCGCTAAAGGGCCACAACCGCGTGCACTTGGGTGCTGTAGGTCCGGCGGGACCGTTTCGCTGCAACATGTGCCCTTACACGATATGCGATAAGGCTGCGCTTGTACGTCACATGCGCACGCACAATGGCGATCGTCCCTACGAATGTGCAGAGTGTAATTATGCCTTCACCACAAAGGCCAATTGCGAACGTCATCTGCGCAATAGACATGCGAAGACTACACGCGAGGAAGTGAAACGTGCCATCATTTACCATCCATCCGAAGACTCAACCTGCGAAGATCCCGCAAAAAAGCTGCACATGTTCTCCTCGCCCGACTTTGATGATGACATGGAGTTGCAATACCAGCAACATCATCCCAAAGATCGTTCCACACCCGTATCGCACCTTAAGGAAATGTTGACTGCCGAAAGTCCGTCAGCGAAGCCAATGAAGATACAGGTTAAAAGTTTGGAGCAATTACTTGATAAGTCCACCGGTTCAGTTGGTAGCTACAATGAGTCGTATGAAGAACGCCCTGCGCCACCCAGCATGCAACATTTGGAAGCCGCACCAATCGATCTGAGCATGGACGTTTTGGATCTTAGCAAGAAACCCGCAATTAAACCGATTGAAAAAGAGGTCGTGGCCGCGCCAATGCCAATGGCGGAAAACGGCATCGATCCCGAGAAAAAGCTCGATATTTTTTCGTATGTTAAGGAGAATCTGAATATGCCAAAAATGCTTGAACTCTGGAGCTTGTCGGCCCAATTCCCCTTCATGCCCGACTTCCGTCCACTGATGAATCAAATGTTCGCTGGCACTGCTGCTGGCAACCCATTTGTACAGCCCGGAATCGACATGAACAAAGTAAATATGCCGGCGCCACCAAACATGAGCGCTCCAATGCTACCGCATTTGAGCTCACTAATGGCTGATAAGCTAAATACGCATCCACATTCTGCACCCGATCCAAATGTGTTGAACCAGATGCTACCCAAATCTTTAATGACACCTCCTGCTCCGAATACCAATATGAACATGCCACGTCACTCGCACATTCCACCGACTGTACTGCCAGGTGGACCTGTGAAAATGGTCATAAAGAACGGCGTGCTCATGCCAAAGCAAAAGCAACGCCGTTACCGCACCGAGCGACCATTCGCCTGTGAGCACTGCTCGGCGCGCTTCACACTACGCTCAAATATGGAGCGGCACGTAAAGCAGCAACATCCACAATACTACGCACAACGCCACCGCAGTGGACATCATGCTATGCGTGGCCGCGGCGCTAGCGGTGCGGCAGCGATGAATAGCATCACCCACTTGCAGGCAGCATTCGCTCAAGCGCACAATCCAGCCGGTCAAGGGCAGGGCAATGGACTGGGCGCCTCACCCATATCCGAACAGGTGAAGTATGCCATACTAGCGCAGCAGCTGAAGGCACGCAAGGACACCGACCTGCTGCAACAGGCTTTGGCACACGGCTCAAGCAGCATAGGAAATAATCATCATATGTTGTTGAATGCCACCGCCGCACTCGGACCGCTTGCCCCACCAAACGGGCTGCAATTCCCATTCAACCAATTGGGTCAACCAACCAACATTAACGGCTCCATCGAAGACGACGAACCGAAATTGATTattgatgaagatgaagatgacgaTGATGTCGAAGAAATACTCGATGACAacgaggaggaggaggagctacAGATCGCCaacgaaaatgttgaaaatatgcGTAAAGCTCCACCCCAACCGCCTGCTGTTGAAGAACTAAAGAATACGCCTCCTGGCAGTGAGTGCACTAACGAGACGGCGAAGAAAGTGGCAGAAACAATACTGGAGCAGGCTATCAAAACCGGCCAAAAACTAAATTCAGCGGCTGCAAGTCCTGCCGCACCCATTGCACCTGTCACACCGGCCAACACCATGAAAGCTATGATCGCTCAAGCCGAATCTGTGGGAAAATTCCTAAAAGAAGTGGCCAGCTCACCATTCAAAGACGAGTCTCAGGATTTGGTGCCAGTTTCCAAGCTGGTCGACAATGCTACCAGCAACGCCGTTTCATTCAACAACTATTTCCGACCCAGTGACGTGGCCAATCACATGGAGCAAAGCGACGAGGAGGGCTTGGTTGCTTCCGGCAGCGCCAGTGAAAGCAATAACTCCGGTACCGAAGATGTAGCCACGCCAGTTGAACCGAAAAAGAAATCCGCCTATAGCTTGGCTCCGAATCGCGTCTCATGCCCCTACTGCCAACGCATGTTCCCTTGGTCTAGTTCCTTGCGCCGACACATACTTACGCACACCGGTCAAAAGCCATTCAAGTGCTCGCATTGTCCACTGCTTTTCACCACGAAGAGCAATTGTGACCGTCATTTGTTACGTAAGCACGGCGACGTGGAATCGGCGGTGTCTGTGTATGTGCCAACCGAAGATGTGAACGAGCCGATACCGGTGCCAAAGTCGGTCGAAGAGATCGAACAGCAACAGCGAAAACGCGAAGAGGAAAAACGGAAGCGCAAAGCCGAAGAGGCGCAGTTGGAACGCGAACGGCGCGAGAAGGACCAACGTCTACAGCACGAGCAAGAACAACAAAGCAAGCTGCTCAAACAATTGGCTGTAgcacagctacaacaacaacttaatGTCTCAATGAGCGCAGCCAATACCAGCAACGCAGATGCTGATGCACGCGCCAAAGAGAATCTTTCACAACTGAACGCCGATTTGCCCTACAAGTGTCACCTGTGCGAAAGCTCCTTTGCCGAGCGCTTCAACTGCCTGGAGCACATCAAAAAGCAACATGCACCGGAATTCACGCTGTTGCTATCCAAAGGCGCCATCGCCAGCGAAGCAGAAGCCAACCAAACACATCTCATCGAAGATGAGGAACGACGCATAGGCGAAGAAGTCAATGGTTTCACTTCATTGTTGCCCAAATTACCAGCTTACACCAATCGCAAGGTAATCTGCGCCTTCTGTGTGCGACGCTTCTGGTCTACCGAAGACTTACGGCGTCACATGCGTACACATTCGGGTGAACGACCATTTCAGTGCGAGATCTGCTTGCGCAAATTTACGCTCAAGCACAGCATGTTGCGTCACATGAAGAAACACACACATCGTGGCCAAAATGGCGTAGCTGGTAGCGATGCTTCCACCACCGGCAACAGTGGATCCGACTTCTCAGATGATGAACAAATGCCTACACCGCCCACGTCTACGCTCAACAATACCGTCACAACGACAGCGACAACAGCCAATGCGATCGCGTCTGCATCTGCGTCTGCGTCTGTGGCTGCGCTGCGTACACCGAAAATACAGGAGCTGCTGAGCAAAGCCAATGAGTGGCGTAGCAGTAATTTGAGCGGTGAGCAGAAGGAGAATATTGCCGAGGAGCAGCCAAATGGATTGCATAACGATTTAATTGGTAATCTACTGGGCATCAGCGACCAAGGTATATTAAACAAATTACTCTCGTCTGCCGATGAAGCGGCCAAACTGTTGGGTGTGGAGAAGTGA
Protein Sequence: MLAAAATGTQSSLEAIQSNVTKMERRDSSTSESSLEHLDLGRTPKKLSSHSSATSTPHTATIGNNNTNKANSNEPNTTADATSAIITSSSPSDRTSASGAKTLLSHKRRPHDSDEANDYDDDEEESPDEQRNKQNALSSRSQRHHKRRCTAPRLDKRTSVQLEFNADDPNSLRKKFRFNRSASASEQMTNNNESGFVDASCSSHYLNASAVSLVAAAAATATTSSASASLMGINSTPPHNSMSASTSASASANGSHSSSSAASSPRGCGTGLAASSASVSSPESGIGDREREDMKFVCTICDVVSATRHEFTNHIRCHNYASGDTENYTCAICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHNHHHRRNSNGTKHASNSHNNNSNNTASSNATGAAVSSGTATNASTNTATNTTYTQLSHGLISEVVKSSSAAASAEAMEAMATDAGTAAAAATLIGNAGGAGVNGKRLHSSGVESCESDGGCSTDTSSSAISISSNHKHSNKNNNSDNINNNAANNNNKNINANRNSLDNFKRKFSDLHDEADVEADDTTMMLALKRRMKTTINNNVIGEDVHAVGAPVDHKNEGDAVVTKKMHTSSSASAASDDEDAEHKPHFQYPVCPVCNADEFANMNALDHHLETVHADIPAKCRLCAVVFRKHSQLSMHFCPQSMPGNVQLPLKECVKCSRSFPNSKDLELHTRECDSAVVRQKRRSRSLSDSYTVPPLSETEIEEKTSLARNNFFRQLYLQSQKPFCAQSMISLPSPLHSANEEGDAGNVSSTDIKQEADTEPTDQLSSNLLSQQSHDSKDLADIQSILNMTSSSSTSNFLKNFEQSVNTPSSNYSLDKDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYTICDKAALVRHMRTHNGDRPYECAECNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSTCEDPAKKLHMFSSPDFDDDMELQYQQHHPKDRSTPVSHLKEMLTAESPSAKPMKIQVKSLEQLLDKSTGSVGSYNESYEERPAPPSMQHLEAAPIDLSMDVLDLSKKPAIKPIEKEVVAAPMPMAENGIDPEKKLDIFSYVKENLNMPKMLELWSLSAQFPFMPDFRPLMNQMFAGTAAGNPFVQPGIDMNKVNMPAPPNMSAPMLPHLSSLMADKLNTHPHSAPDPNVLNQMLPKSLMTPPAPNTNMNMPRHSHIPPTVLPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQYYAQRHRSGHHAMRGRGASGAAAMNSITHLQAAFAQAHNPAGQGQGNGLGASPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSIGNNHHMLLNATAALGPLAPPNGLQFPFNQLGQPTNINGSIEDDEPKLIIDEDEDDDDVEEILDDNEEEEELQIANENVENMRKAPPQPPAVEELKNTPPGSECTNETAKKVAETILEQAIKTGQKLNSAAASPAAPIAPVTPANTMKAMIAQAESVGKFLKEVASSPFKDESQDLVPVSKLVDNATSNAVSFNNYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVATPVEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVESAVSVYVPTEDVNEPIPVPKSVEEIEQQQRKREEEKRKRKAEEAQLERERREKDQRLQHEQEQQSKLLKQLAVAQLQQQLNVSMSAANTSNADADARAKENLSQLNADLPYKCHLCESSFAERFNCLEHIKKQHAPEFTLLLSKGAIASEAEANQTHLIEDEERRIGEEVNGFTSLLPKLPAYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHTHRGQNGVAGSDASTTGNSGSDFSDDEQMPTPPTSTLNNTVTTTATTANAIASASASASVAALRTPKIQELLSKANEWRSSNLSGEQKENIAEEQPNGLHNDLIGNLLGISDQGILNKLLSSADEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00082376;
90% Identity: iTF_00082376;
80% Identity: -