Basic Information

Insect: Anastrepha fraterculus
Gene Symbol: -
Assembly: GCA_037575425.1
Location: JAYXIM010034449.1:113488-116512[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1 1.4e+02 4.5 0.5 2 23 223 244 222 244 0.93

2 12 0.00015 0.02 16.6 0.9 3 23 288 309 286 309 0.92

3 12 0.11 15 7.5 1.1 2 23 364 385 363 385 0.97

4 12 6.3e-06 0.00087 20.9 2.7 1 23 391 414 391 414 0.96

5 12 0.042 5.8 8.8 0.5 2 23 431 451 430 451 0.96

6 12 0.0071 0.98 11.3 3.6 1 23 465 487 465 487 0.95

7 12 1.7e-05 0.0023 19.6 0.4 1 23 496 519 496 519 0.96

8 12 0.00015 0.02 16.6 1.2 1 23 524 546 524 546 0.96

9 12 5e-06 0.00069 21.2 3.6 2 23 552 573 551 573 0.98

10 12 0.0074 1 11.2 2.3 1 23 579 601 579 601 0.97

11 12 0.00069 0.096 14.5 3.1 1 23 606 628 606 628 0.95

12 12 0.088 12 7.8 1.4 1 23 633 657 633 657 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1	1.4e+02	4.5	0.5	2	23	223	244	222	244	0.93
2	12	0.00015	0.02	16.6	0.9	3	23	288	309	286	309	0.92
3	12	0.11	15	7.5	1.1	2	23	364	385	363	385	0.97
4	12	6.3e-06	0.00087	20.9	2.7	1	23	391	414	391	414	0.96
5	12	0.042	5.8	8.8	0.5	2	23	431	451	430	451	0.96
6	12	0.0071	0.98	11.3	3.6	1	23	465	487	465	487	0.95
7	12	1.7e-05	0.0023	19.6	0.4	1	23	496	519	496	519	0.96
8	12	0.00015	0.02	16.6	1.2	1	23	524	546	524	546	0.96
9	12	5e-06	0.00069	21.2	3.6	2	23	552	573	551	573	0.98
10	12	0.0074	1	11.2	2.3	1	23	579	601	579	601	0.97
11	12	0.00069	0.096	14.5	3.1	1	23	606	628	606	628	0.95
12	12	0.088	12	7.8	1.4	1	23	633	657	633	657	0.97

Sequence Information

Coding Sequence: ATGGTAATTCAATGTCGCGCTTGTCTAAATTCAAAGGACACTGCATTTATACGCATGGAGTCCCATATAGCGGAAGGCATCGACTTCTTTTCTTGCTTCAGTGTGTGCACACAATTGGATGCAGGATTCAATGACGAACTGCCGGCTGTTCTTTGCACCAATTGCTCTCAGGATCTACAAATAGCTTTCAATTTTGTGCAAACTGCGCGCCAAGCTGACAAAATGCTGCGTGAGAGTTTACTACAAAAGCTGATGCCCGATGAAATAGTGGAAACATTGGACACAGAAGTTGGCGATTCAATAATGGAGCCTTTGGAAGTTGTAGACGATAGTGAAGATGAGGATTGTGTGGTTGAGGAGCTTCTAGAAGACGAGCCTGTCTTAGATGAAGTTATCGATGAGGGTGATGTAGAAATAATGGAGgtcgaaaaagcagatgagcatatttttgaaaactcaGTAGATGAACTAGAACTTATTGAGGAGAAATACGAAGAGACTCCTACAGTAGAATCTGGAAATGACATAAATTATCAGCACGAGGAACAGCCCAACTCAGGAGAATATTTCCCCGAAGATGAAGTTGATGACGAGTACCAGAGGGAATACCACGAAAATGAAGAACAGCTCAACATATGCGATACCGTATCTAATGGTGCTAAATGGAAATGCATAGAATGTAAGCGTGTCTTATGTGGCAACGTCTCTTATGAAGGCCATATGAATATGCATCGCTCATTGCGTCCTTACAAATGTACTTTATGCATGTGTGCTTTTCGCTGCAAAAATGCGTTAGAGCAACACACGCAAAAGCGACACCAGCCAGAAAATACATTGGAAAGGACTCCTCAAATAAGTAATTGCGATAAATGTCCAAAAATATTCTCAACGCGTGAAGAATTACGAGAACACCATGAATTGGTACATCCCGAAAGTTATCCTGTTCAGTGTCGGCGCTGTCCGCTAATAGAACCGTTAACGCGCTCCAAATTAGTGGAACATTTTCGTATTGAACACCCAGTAGAGCATCGTAAGCATTTCCCCACAGTAGGAAGACCACTGAATGAACCAATCAAGCCGACGCCTTGGCAATGTGAAGTGTGTAAACGTTATATGCGATCAGAAGCAGCCTTACGCGATCATCGACACACTCATCGAAATGAACGGCCCCATGAATGCCAATTTTGTTCGAAACGTTTTGCTACAACCAGTAATTTACGCCAACATATGCGAGGTGTGCATACCGAGGAATATGAGAAGCAAGTTAATGAGGGTGGAGATACTGTTGTGCAAtgtgaaatttgcaaaaagcaGCTTCTTCGGCGAAATCTGGAAAAACATATGGCTCTGCATATCAAAAAAGAACGTGAAGCGAATGAGactcaaacaaaattcctttgcGCATATTGTTCACGCGAgtgtaaaagccaaaaatccCTCAACCAACATGAGAAAATGCATCAAGGTGCATCACCAGACATTATCTATATTTGTGCCGATTGTGATCGTTCCTATGCCACACAATATTTGTTACAGCAACATCGCAAACAGGCACACAAAGAGCGAGATCACTTCTGTCCGATCTGTGGGAATGGATTTAAGCTTAAAAATCAATTGGTGAATCACATGAAACTgcatatggaaaaaaatattaaatgtccgCACTGTGAGAAATGTTACGCACGCAAATTTGATCTAGACGTACACATGCGCACTCATACAGGCGAGCTACCATTCGCCTGTCATCTTTGCGAAAAGCGTTTCGCCATTAAGGTACGACTCACTTATCATTTGCAGAAGCATTATGGCGTTAAGCATCGCTGCAAAGATTGTGGTGCAGAATTCAATTCAAAACAGAAACTGAAAGCACATAGTTATAAGCATACCGGCATGCCGTATCGCTGCGAGAGGTGCGATGGCCACGGCTTTGCTAATCGCGATGTCTTCAAACGGCATCTACAGCGTGTGCATTGCACCAGTATGAGCGATGAGGAACTTGTTGCCATGTTTCAGCAAAATACTGGGAAATCGATACGTATACGCCGTGTTGACTTGTACGAAGATAATGTGGAAAAAGAGCCTTTGAGAACCGCGTCCGAGACGGTCGGTACTTTGATCAATGCAGACGACATTGCACTAGAATCAGAGGTGATTCATAGTTGA
Protein Sequence: MVIQCRACLNSKDTAFIRMESHIAEGIDFFSCFSVCTQLDAGFNDELPAVLCTNCSQDLQIAFNFVQTARQADKMLRESLLQKLMPDEIVETLDTEVGDSIMEPLEVVDDSEDEDCVVEELLEDEPVLDEVIDEGDVEIMEVEKADEHIFENSVDELELIEEKYEETPTVESGNDINYQHEEQPNSGEYFPEDEVDDEYQREYHENEEQLNICDTVSNGAKWKCIECKRVLCGNVSYEGHMNMHRSLRPYKCTLCMCAFRCKNALEQHTQKRHQPENTLERTPQISNCDKCPKIFSTREELREHHELVHPESYPVQCRRCPLIEPLTRSKLVEHFRIEHPVEHRKHFPTVGRPLNEPIKPTPWQCEVCKRYMRSEAALRDHRHTHRNERPHECQFCSKRFATTSNLRQHMRGVHTEEYEKQVNEGGDTVVQCEICKKQLLRRNLEKHMALHIKKEREANETQTKFLCAYCSRECKSQKSLNQHEKMHQGASPDIIYICADCDRSYATQYLLQQHRKQAHKERDHFCPICGNGFKLKNQLVNHMKLHMEKNIKCPHCEKCYARKFDLDVHMRTHTGELPFACHLCEKRFAIKVRLTYHLQKHYGVKHRCKDCGAEFNSKQKLKAHSYKHTGMPYRCERCDGHGFANRDVFKRHLQRVHCTSMSDEELVAMFQQNTGKSIRIRRVDLYEDNVEKEPLRTASETVGTLINADDIALESEVIHS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00082404; iTF_00083356;
90% Identity: iTF_00082404; iTF_00083356;
80% Identity: -