Basic Information

Insect: Anastrepha fraterculus
Gene Symbol: -
Assembly: GCA_037575425.1
Location: JAYXIM010026707.1:4099-8540[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00037 0.051 15.3 1.0 1 23 204 226 204 226 0.95

2 15 0.024 3.4 9.6 3.5 3 23 234 254 232 254 0.95

3 15 0.00022 0.031 16.0 0.1 1 23 396 418 396 418 0.98

4 15 0.0006 0.083 14.7 0.5 1 23 424 446 424 446 0.98

5 15 5.9e-05 0.0082 17.8 3.2 1 23 478 500 478 500 0.98

6 15 0.011 1.5 10.7 0.3 1 23 516 538 516 538 0.94

7 15 0.017 2.4 10.1 0.5 1 23 544 567 544 567 0.98

8 15 0.35 49 5.9 0.3 5 19 578 592 575 593 0.91

9 15 0.00021 0.029 16.1 5.6 1 23 602 624 602 624 0.97

10 15 0.055 7.6 8.5 1.2 3 23 631 651 629 651 0.96

11 15 1.2e-05 0.0017 20.0 1.0 1 23 659 681 659 681 0.98

12 15 0.0062 0.85 11.5 0.2 3 23 689 709 687 709 0.97

13 15 0.00019 0.027 16.2 0.8 1 23 715 737 715 738 0.95

14 15 0.032 4.4 9.2 0.2 1 23 748 770 748 770 0.97

15 15 0.021 2.9 9.8 0.0 1 20 1308 1327 1308 1330 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00037	0.051	15.3	1.0	1	23	204	226	204	226	0.95
2	15	0.024	3.4	9.6	3.5	3	23	234	254	232	254	0.95
3	15	0.00022	0.031	16.0	0.1	1	23	396	418	396	418	0.98
4	15	0.0006	0.083	14.7	0.5	1	23	424	446	424	446	0.98
5	15	5.9e-05	0.0082	17.8	3.2	1	23	478	500	478	500	0.98
6	15	0.011	1.5	10.7	0.3	1	23	516	538	516	538	0.94
7	15	0.017	2.4	10.1	0.5	1	23	544	567	544	567	0.98
8	15	0.35	49	5.9	0.3	5	19	578	592	575	593	0.91
9	15	0.00021	0.029	16.1	5.6	1	23	602	624	602	624	0.97
10	15	0.055	7.6	8.5	1.2	3	23	631	651	629	651	0.96
11	15	1.2e-05	0.0017	20.0	1.0	1	23	659	681	659	681	0.98
12	15	0.0062	0.85	11.5	0.2	3	23	689	709	687	709	0.97
13	15	0.00019	0.027	16.2	0.8	1	23	715	737	715	738	0.95
14	15	0.032	4.4	9.2	0.2	1	23	748	770	748	770	0.97
15	15	0.021	2.9	9.8	0.0	1	20	1308	1327	1308	1330	0.93

Sequence Information

Coding Sequence: atggacagacaaacatttgAAATACAATGGATAGAAGGAAATCCTGAAGACTTGAAAACTGCCGGTGGACAGTTGGTCGTGAAACCACAAGTTCCATCCGAAGAAGAGCTACTTGCTAATGGTGTCGTTGGTGAAAGTCGTGCCACCTATCACCTAGTCTCTGGCACCGATGATAATGATGGAAATGTTCCAAACGAGGTTGATATCGATCAAATAGCGGCTGAAAATTTAATCTTCATGGCACGCGATGGGCAAATGGTAACGGAGATTATTGGTGACACTACTGACGATAATGGTGCCGTTGTTGTAGCCGCAACTGCTGGCATTGATTGTGCAGAGGCATTGCAACAAGCAGCGGCGGCAGTTTTAGCTTCCAATGGATTAACCCATGTGCAGGAAGATACCGGTGGaggatttgttgaaaattatgtCGACAATACGCCACAAATGGTAACCGAAGAAGTGATAACAGATGACTGGGTACAACATCAGGGCGAGGAACGtgTGGAAATACCGGCAGATCAGATAATTTGTTCTGGTTCGCAGGTTATGCTTGATATGGAAGTACCTTTACCCACTGTGCAGGATGAATACACAGCGCTCCGGCCCTACCCATGTGATTTTTGCAGCAGACGCTTTCGTAAGAAGACAAGTTTGATGAATCACATTGTTGCACACCAGAACGATAGACCACATTTGTGCAAATTGTGCACGTCACGCTTTTTTCGTCGGTCTGATTTGATAAATCATTTAAAAGAACACGCCGACGCACCAGATCCTGAATTGGATGCAGAATTTATGAACTTTGTGGAGcaggaacaacaacaagcacgGCAGCCTATTGATCATTACTACGAACAGGATTGGACCACACAAATTAATTCATTGCAACGCAGCGTAAAATCTGTACGCAAACCGCATAATGCTAGCGGTAACAGCTCATCTACCTCAACCTCGACGACAGTGGGACGCGGACGTATTAGTCGGTTAAAGCCAAAAGAAGAAAGCTATGTCCTGAATGAGCCTCTGCCAAATGATCTGGAAGAGGCGGTGAATGCAAACATAACTGCTGCCGCTTACGAAGACTGCCAGCAACTTCAAGCATCCACTGCTGTGGTAAAGTTCAGCCAAAACCAATCGCCAACACCTCAAGAGAGATTTCCTGTTATCGATGAGAGTAAACCGTTTGTCTGCCAACAATGCGGTTTGGCATTTGCGCGAGAGAAGGCATTGCTCGCACATACAAAGaatCATCGTGACGATCAGCCGCATGAGTGCAGTCAGTGTAATGAGATGTTTTGGGATGCAGCCAATCTCCAGGAGCACCTGAAAACACATCAGTTCGAAGACAGCAATTCAGAGTATGATCCAGATGAAGCGGAAGGGGAGGACACGCAAAGTGAATCGGAATCGGAGCGTTTGCATGGCGAATTCTACTGCAGCGAATGTGGCATGTCTTTTCACCGCGAAGATTTGCTTCGCAGACACTCCAAAACCCACACAAAAACTAGAGCTGAAGCTGACATGGAGAATGACAAAGATCGACATTGTTGCAACACTTGTGGCGAAACATTTGCCGAAGCGTTGGATCTATTGGCACACGCTGAAATTCATGCGCGCTATCCACCATTTAAATGTGTTCTATGTGGCGAAACGTTTTTTGAGGAGCTCACAATCAAGCGTCACTTGCAGACTCTACACCCTCACGATATGACACCCAACTCGTGCATCCTCTGTGGCAAAGAGTGCCGCGATCGCAAGGCTTTAATAAAGCACGCATGGGATCATTCACGCGAAAAATGCCACTCTTGttcaaaatgtggcaaaaactTCCACAATAAAGCGCGTTTGAAACGACATATGGCCTCTCATCGCGACAAGTCTGTGATCTGTGATGTCTGCCACGAAGAGTTTCCTGATGGGCGCAGTCTGTCCAATCACCGCCACTCGCATACTAACTCTTCGGGCAAAATGTTTCCATGTCATGAGTGCGGCAAAACGTTTGGTTCACGGAGTTcgcaacaaatacatgtacgcATACACACCGGCGAAAGGCCATACGGTTGTCGGTTCTGTTGGAAGGCTTTCGCCGATGGCGGAACGCTGCGCAAACACGAACGCATTCACACGGGCGAGAAACCCTACGCCTGCTCAGTGTGCTCGCGTGCATTCAACCAACGTGTGGTGCTACGCGAACATATACGATCACATCACTCGGGCTTGGATGCGAAACGCAACACTTACTACTGCACAGTTTGCTCCATGGAGATGTCGTCCTCAAGTGATCTGGTGCAGCATCTAATACAACATAGCGATATGAATACGGCTATGCAGCGACAGCCGGTGaCCGGCCCACGTAAGTACAAACGGCGACGAAAGCTGAAACCGCACGAAATCGCGCGCTTACGCAGTGAGAGTCAGCAAAATGTCAATGGCAGTGACATTGAAATCTCAGATATGGACCTTGATATGGACAATGTGGATGATCTGTTAGGCATTGCAGATCCCCCCGCTGCTACCAAATCAACTTCAAAATCAAAGCGTGGTAAAGCTAAAAGCAGCGTTGATAAATCGTTGATGAACGAAGTAATTTTGCCTGATAATGACCTACTTATGGAACGGTCTAGAAAGCCGCGCTATAAATCAACTGGCAGCAACTCGGACACATTATGGCAAACGAAGCTCATCAACTCCAACTCCTTGCTATCGAATTTAGAAAACACTTTGCAAAGCATCGACACGCTCGTGGTGGGGTCTTCACATGCGGATACCGAGGAACGCAGGTCGCGGTACAGACCGGGTGGCGAGCTGAATAGTGGTGGCTCGCAGCGCACGCAGGAAGTACATATTAACAAGAACTATAGCGCAAACAAAGAACGCAAACGACCTGAAAAAACTTCGTCTTCCAAAGTAACGCGTCCGCGCATGATTCATACCGAAAAGTGGTCTGTCGGCAGTAATGAAGGTGGGCGTAAACGCTCTAAGGCGATTGTAACGCAAAAAGAAAATAGTGGCCTAGATTTATTGCGCCCATCCACAACAATCGTCGACGACTACGAAATTATTTCACCAGCCACTGAGTTGCCCAAACAGATCAGCTCGAGCCCGCCACGCATCAAGGAAGAAGGTGCCGAAAATTACCAACATCAGCAGCATCACCAGCAGCGTACACACTACAACACACATCGCACGAGCTCGTCACGGAATATCGATCTGTATGACACACATTTTCTTGGTGGCACCGCCATGCTGCGCAAAGAAGCCTATGAGAAATTCAATCCCAGCATAGTTAACGATCTGGAAGATATTCTGCGTTCACCTATTAAATGCGATCGCACCGAGCGCCACCGCTTCATTAGTGAATCATCCACACAATTCCTCGAAGAGGAGCAACATAATATGATTAAAATCGAACCAACATCGCCAGATTTGCGCGAGATTGTGGTAGGTGCCAGCGCCACTGCTGGCGTGGGTGTAAGCAGTGGTAGCGCCAGCGGCAGCAGCAACGAACGCCGCCACACACGCACTGTGCGCAATCGTACCGGTACTATGAATCGAAAATACCTCGAGTTTGAGCCTGATTTGCCAGTGAATGGTGCATCGCGTGCACAAAAGCGTAGTACGCCAACCGAGAGCAGTAGTGGCAGCAGTTCGAAGAATAGAAAAGCCAAGATCAACAGAAGGGAGAAACGCGAAAGTTCCATGAATAGCCAAAGAACCCCCATATATTCCTCCTCCTATAGCATAGATGGTTTCTCCAAATCAAATGGCAGCGGTTCACTTACGACCAACAACGATTCATCCTTCTCTTCACTATCGCCGACTGATGGCGTCACTTCGGTTGCGGCCACCACAGCGGTATCAGCCTCATCATCCACTGCACCAGCGGCTGCAGCGCAGCCCGAACGCAAACAACGTTATTTCGAGTGCGAGATGTGTTCGGCCGTCTTTCCAGACCGCGCACAGCTGCTGGATCATGTACCTATTCACATATAA
Protein Sequence: MDRQTFEIQWIEGNPEDLKTAGGQLVVKPQVPSEEELLANGVVGESRATYHLVSGTDDNDGNVPNEVDIDQIAAENLIFMARDGQMVTEIIGDTTDDNGAVVVAATAGIDCAEALQQAAAAVLASNGLTHVQEDTGGGFVENYVDNTPQMVTEEVITDDWVQHQGEERVEIPADQIICSGSQVMLDMEVPLPTVQDEYTALRPYPCDFCSRRFRKKTSLMNHIVAHQNDRPHLCKLCTSRFFRRSDLINHLKEHADAPDPELDAEFMNFVEQEQQQARQPIDHYYEQDWTTQINSLQRSVKSVRKPHNASGNSSSTSTSTTVGRGRISRLKPKEESYVLNEPLPNDLEEAVNANITAAAYEDCQQLQASTAVVKFSQNQSPTPQERFPVIDESKPFVCQQCGLAFAREKALLAHTKNHRDDQPHECSQCNEMFWDAANLQEHLKTHQFEDSNSEYDPDEAEGEDTQSESESERLHGEFYCSECGMSFHREDLLRRHSKTHTKTRAEADMENDKDRHCCNTCGETFAEALDLLAHAEIHARYPPFKCVLCGETFFEELTIKRHLQTLHPHDMTPNSCILCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVICDVCHEEFPDGRSLSNHRHSHTNSSGKMFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCSRAFNQRVVLREHIRSHHSGLDAKRNTYYCTVCSMEMSSSSDLVQHLIQHSDMNTAMQRQPVTGPRKYKRRRKLKPHEIARLRSESQQNVNGSDIEISDMDLDMDNVDDLLGIADPPAATKSTSKSKRGKAKSSVDKSLMNEVILPDNDLLMERSRKPRYKSTGSNSDTLWQTKLINSNSLLSNLENTLQSIDTLVVGSSHADTEERRSRYRPGGELNSGGSQRTQEVHINKNYSANKERKRPEKTSSSKVTRPRMIHTEKWSVGSNEGGRKRSKAIVTQKENSGLDLLRPSTTIVDDYEIISPATELPKQISSSPPRIKEEGAENYQHQQHHQQRTHYNTHRTSSSRNIDLYDTHFLGGTAMLRKEAYEKFNPSIVNDLEDILRSPIKCDRTERHRFISESSTQFLEEEQHNMIKIEPTSPDLREIVVGASATAGVGVSSGSASGSSNERRHTRTVRNRTGTMNRKYLEFEPDLPVNGASRAQKRSTPTESSSGSSSKNRKAKINRREKRESSMNSQRTPIYSSSYSIDGFSKSNGSGSLTTNNDSSFSSLSPTDGVTSVAATTAVSASSSTAPAAAAQPERKQRYFECEMCSAVFPDRAQLLDHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00083267;
90% Identity: iTF_00083267;
80% Identity: -