Basic Information

Insect: Anastrepha fraterculus
Gene Symbol: -
Assembly: GCA_037575425.1
Location: JAYXIM010032403.1:56891-59574[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00011 0.016 16.9 1.4 1 23 25 47 25 47 0.95

2 14 0.00016 0.022 16.4 3.6 1 19 53 71 53 76 0.96

3 14 8.5e-05 0.012 17.3 1.5 1 19 83 101 83 106 0.90

4 14 0.00089 0.12 14.1 2.2 1 23 119 142 119 142 0.98

5 14 0.00077 0.11 14.3 4.8 1 23 255 277 255 277 0.98

6 14 0.00093 0.13 14.0 2.8 1 23 283 305 283 305 0.98

7 14 0.012 1.7 10.5 1.3 1 23 318 340 318 340 0.98

8 14 0.00029 0.04 15.7 0.5 1 20 348 367 348 368 0.95

9 14 0.0011 0.16 13.8 0.6 2 23 422 444 421 444 0.96

10 14 0.0039 0.53 12.1 5.2 1 23 462 484 462 484 0.97

11 14 0.0057 0.78 11.6 6.9 1 23 560 582 560 582 0.98

12 14 2.9e-06 0.00039 22.0 3.0 1 23 588 610 588 610 0.97

13 14 0.34 46 6.0 1.0 1 23 617 639 617 639 0.92

14 14 0.00097 0.13 14.0 1.3 1 23 645 668 645 668 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00011	0.016	16.9	1.4	1	23	25	47	25	47	0.95
2	14	0.00016	0.022	16.4	3.6	1	19	53	71	53	76	0.96
3	14	8.5e-05	0.012	17.3	1.5	1	19	83	101	83	106	0.90
4	14	0.00089	0.12	14.1	2.2	1	23	119	142	119	142	0.98
5	14	0.00077	0.11	14.3	4.8	1	23	255	277	255	277	0.98
6	14	0.00093	0.13	14.0	2.8	1	23	283	305	283	305	0.98
7	14	0.012	1.7	10.5	1.3	1	23	318	340	318	340	0.98
8	14	0.00029	0.04	15.7	0.5	1	20	348	367	348	368	0.95
9	14	0.0011	0.16	13.8	0.6	2	23	422	444	421	444	0.96
10	14	0.0039	0.53	12.1	5.2	1	23	462	484	462	484	0.97
11	14	0.0057	0.78	11.6	6.9	1	23	560	582	560	582	0.98
12	14	2.9e-06	0.00039	22.0	3.0	1	23	588	610	588	610	0.97
13	14	0.34	46	6.0	1.0	1	23	617	639	617	639	0.92
14	14	0.00097	0.13	14.0	1.3	1	23	645	668	645	668	0.97

Sequence Information

Coding Sequence: ATGGATTCTGGGACtGAAAGCAAAACACTTGTTGGTACCTTTGAAAGCTCGTCCAACAAAAAGGCTGGTCGTTACGTTTGCGTTAAATGTGGTAAAAGATTTAAAAAGCCCTGCCTACTTCTTCGTCATGAAGTAGTGCATTTGTCTGAGAAGCCCTTTAAATGCTCGGAATGCCTCAAACGATTTACGCAGAACTCTTCACTACAACGCCATTGCGCGGAACAACATAAGACCAACAGTAAAAGTTATAAATGTGCTAAATGTCCACTAAGTTTTAGCCAAAAAGGTAATTTGCGTTCCCATGATAAAAAGCAGCATCCACCAAAAATTGCAGGAAAAACGGAGAACAATGCTTATTCCTGCGAGCGGTGTACATCTACATATAGGAGTAAACAAAAACTTAGTAGACATATAAATACTGTACACGGAGACGGCGTTAGAACTAAAAACGGTTTTAATGCCTGCCATGCAGAAGTGGAAGATGATTTGACGCTGACGCAAAATGTTTTGGAGCAGTTGAAAGcatttcaaaatgaaatgcaaGCATTAGAAGCGCCTATTGGAGAACCTACAGAACATGCAGCATCCCCAAACACAGAAGCTGCAACAACCAACCCCAATAACTTGGCTCACGTGCGTTTGCAGCAGAACGTCGACGAACCTTTCATCAATGACGTTCAGCTAAGAGATCGCTTGAGCACGCAGGAAACAGAGCGCTATTTACGCGCGCAGTGTATCGTACAGTCAAATGGATGTGCTCTATATGTGTGCGCGTTTTgctcgaaaaaatttcgaaaaacttaCGATTTCATTAGacatCACCGAGTGCACACACGAGAAAAACCTTACAAGTGTGCATTTTGCCAAAGCGCCTTCAGCACCAAATCGAAACTGCACGATCATGTAAAAATACATCGTTTAGACGAGCAGATTGGCATATTCTCTAAACATTATCCCTGCGCAGTTTGTTGTCAAGCGTTTAGTTCGTTGCGATTGTTGGATAAACATACGAGAACTCACGCTAATGcctatataattaaatataaatgtgAAATCTGTGGGGCTACGTTCAACTCTAGCACAGCGCTTTCGTCACACAAGCATGCGAGCGCGGATGAAGACCTGCATTTTGTGCAACAACTACTACCAACCCCAATCGAAGTTTACACGAAATCGGAGGAATCGATGAATAGCACCGACAATACCTCGATTGTAATAAATTTCGAAGGGCATGTAAAAGCTCGGCGTATCTCTGCTAAATGGAAATGCTTCACGTGTGGCAgACTTTTTTCGAATTCTTCCGTGCTGGGCAACCATCGTCGTATCTACCACGCAGTTTATAGGCGTACGCGTCTTGGCGCCACCTCAGCTGTGATCCGTTGCTATAAGTGTGCATATTGCGCACGATTTTTTAAACGGCAGTCGCATTGCAATGCTCACATGCTTGCCCACTTCAAACGTTTATTGAACACTGGCACCAAAGACCACCGAGAGAAGGAGAAGCAAACAACATGCAATCCAAGAGTAATCAATGCATTAGTGATTGTCACAGAGCTGGCGTCAAAAGTAGCCATTAAAGTGGTCCGCTTCAATGTAATATCGTCCAATCGTTACAAGGGCGCACAGAAAAACGTTCCCAAATTGCAATCATCTAGGAAAATACTTGGCAAACCCCGGCATAAATGCCACATCTGCTGGAGTCAATTTAGTAAATCGTGCGATTTAAAGCGTCACTTATTGGTACATACCGGGGAGCGGCTGCATGAATGTCCCACATGCGGTAAGTGCTTCAGTTTGAGTAGTACGCTTAAAGAGCACCAGTTAGTACATGCAGCGGAACGCCAAAAACACGTTTGCATCGTTTGTGGAAAAACTTATTTGGCTAAGAAGACACTAAACCTGCATTTAAGACTGCATACTGGAATGCAGCCGTTTCACTGTGAATACTGCGAGTTGAAATTTCGTACTTCAGGCCAAAGAATTGCGCACTTGAAAGTTGTGCATGGACTGCAAAAATATGTAGCTACAAATAAAGAGGAAATAACCGACTAA
Protein Sequence: MDSGTESKTLVGTFESSSNKKAGRYVCVKCGKRFKKPCLLLRHEVVHLSEKPFKCSECLKRFTQNSSLQRHCAEQHKTNSKSYKCAKCPLSFSQKGNLRSHDKKQHPPKIAGKTENNAYSCERCTSTYRSKQKLSRHINTVHGDGVRTKNGFNACHAEVEDDLTLTQNVLEQLKAFQNEMQALEAPIGEPTEHAASPNTEAATTNPNNLAHVRLQQNVDEPFINDVQLRDRLSTQETERYLRAQCIVQSNGCALYVCAFCSKKFRKTYDFIRHHRVHTREKPYKCAFCQSAFSTKSKLHDHVKIHRLDEQIGIFSKHYPCAVCCQAFSSLRLLDKHTRTHANAYIIKYKCEICGATFNSSTALSSHKHASADEDLHFVQQLLPTPIEVYTKSEESMNSTDNTSIVINFEGHVKARRISAKWKCFTCGRLFSNSSVLGNHRRIYHAVYRRTRLGATSAVIRCYKCAYCARFFKRQSHCNAHMLAHFKRLLNTGTKDHREKEKQTTCNPRVINALVIVTELASKVAIKVVRFNVISSNRYKGAQKNVPKLQSSRKILGKPRHKCHICWSQFSKSCDLKRHLLVHTGERLHECPTCGKCFSLSSTLKEHQLVHAAERQKHVCIVCGKTYLAKKTLNLHLRLHTGMQPFHCEYCELKFRTSGQRIAHLKVVHGLQKYVATNKEEITD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00083264;
90% Identity: iTF_00083264;
80% Identity: -