Afra037992.2
Basic Information
- Insect
- Anastrepha fraterculus
- Gene Symbol
- wek
- Assembly
- GCA_037575425.1
- Location
- JAYXIM010051641.1:5456-17602[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0035 0.49 12.2 4.2 1 23 297 320 297 320 0.97 2 20 2.1e-05 0.0029 19.2 4.0 2 23 330 351 329 351 0.97 3 20 0.0005 0.07 14.9 0.7 1 23 360 383 360 383 0.95 4 20 6.8e-05 0.0093 17.6 0.1 1 23 389 411 389 411 0.97 5 20 2.9e-06 0.00039 22.0 0.8 1 23 417 439 417 439 0.98 6 20 0.001 0.14 13.9 0.9 1 23 444 466 444 466 0.96 7 20 5.2e-06 0.00072 21.1 2.2 1 23 472 494 472 494 0.97 8 20 0.049 6.8 8.6 3.9 1 23 500 523 500 523 0.97 9 20 0.0055 0.77 11.6 4.0 1 23 908 931 908 931 0.97 10 20 0.0069 0.95 11.3 4.0 2 23 939 960 938 960 0.97 11 20 0.00065 0.09 14.5 0.2 2 23 970 992 969 992 0.94 12 20 0.00035 0.048 15.4 0.1 1 23 998 1020 998 1020 0.97 13 20 3.4e-06 0.00047 21.7 3.4 1 23 1026 1048 1026 1048 0.98 14 20 0.001 0.14 13.9 0.9 1 23 1053 1075 1053 1075 0.96 15 20 7.4e-06 0.001 20.7 2.2 1 23 1081 1103 1081 1103 0.97 16 20 0.048 6.6 8.7 3.8 1 23 1109 1132 1109 1132 0.97 17 20 7.8e-06 0.0011 20.6 2.3 1 23 1441 1463 1441 1463 0.98 18 20 0.0027 0.38 12.6 0.5 1 23 1468 1490 1468 1490 0.96 19 20 5.2e-06 0.00072 21.1 2.2 1 23 1496 1518 1496 1518 0.97 20 20 0.084 12 7.9 4.1 1 23 1524 1547 1524 1547 0.96
Sequence Information
- Coding Sequence
- ATGCAGACAGGAAACGCATCAATCGGCGGAAAAGACTACAACTCCACTTCTACCTCCGCATCCGCATCCGCAGATTGGCACTATTGGTGTCGACTTTGCGCAAAGATTGATACACacagtgaaaatattttctatgaacaTCAACCACAAACAACTTACTCGGGGGGCAAAAGTGACGATAATAGATGTACAATGGCCGTAGcaataggaaaatatttttacgtacAAATAAAACACGATGACGATCTGCCCAAACTGTTATGCACAGAGTGCATTTCATTGGTGACAACCCTTCTAGATTTCAATGAACGTGTTGTAAAAGTGCAAGAAATGTATGCTGAACTGCAAAGTGCTCAATTCAGTAACGATACAGATTTTCAGTCTATTCGACTAAAATATGGAATTCTGAAGGAAGATCCAGCTCAATTATACAAGCACCAACATGAAGAAGATTGTTTTACTGAAAAGATTGATGAAACAAGTGTGGCAAACATGCacaattttgaaatcaaattaataacgGAAATTTCAACCGATTGTATGCAAACCAATGAAGTTAGTCATTCACTTGAATTTGAAGGCACGGAAGGTGAAGATCCATTTGCCAGCGGAGTTGTCGTTGAGACCTCTGAAAACCAGACTCTTCGTGCAATAAAAGAATGTGATGGAGAAAGTAATGATGGTAAATTATCTGATTTCATACCTTTGAATGCACAGAATAAGTTATTAAAAaccgaaataaaaacaaatgaaaagggAGGAGCTTCAAAAAAAGATAATGAATTGAAGTTAATGGATACTAATCGTAAACGATCTCATAAAAGTAGTTTTGGTATAAAGTTAGAAAAGTTTATTACTGGCTCCGAGGGAAAGTCAACTGATGACAAATACTTTTGTAGCACCTGTTCCCTTCATTTTCAACGTCCTGGCAATTTTCGTGTgcatatgaagaaaagacaTGACATCGTATATGAATTAGATCCTTTGACATGTCCTCAATgtcaaaaatctttcaaaacagAGTTCAAACTAAACCATCACATAAAAACGCATCGGCCACTGTCGGATAAGCGAATATTTCCATGCCCACAATGTGATCGAAAATTTCAGACAAAAGATTCTGTAAGCACacatataaaatttgttcatgaaGATATTCGTCCATTTATTTGTGAAGAATGTGGTAAAGGTACACGAACGGAAACAACACTACGAGAACATATGCTTATACACACTGACCTGGCACCTTTTGAATGTGAAATATGTAAGAAAGGTTTCAAAAATCAGGCGCGTTTAAAGAATCATATGCAGATACACAGTTCCAGTAAACACATCTGCAGAGAATGTGGCTTACAATTAAATACTCGTGAAACTCTAAATCGTCATATGCTTGTACATTCTGATATTATGCGTCATAAGTGTGATTATTGTGGGCGAGCATTTAAACGAGCCAAAACGCTGAAGAATCATTTAATACTCCATAGTGGTCTAAAGCCCTATACATGTGACTTCTGTGACAGAACTTTTGCAACTGGGGCCAATTGCCGGACTCACAAAAGAAAATCACATCCGGAAGAATTAGCTACATTAGAGGCTTCAGGAGAAAAAACTTACACGAAAAATATACCCAGATTGTCTGTGTTAAAAACagtAACGCAATCTGCCGAAAATCTAATTCCTGTTGTCTCCAAACAGAATGATGACCTTTTATTAGGAAGGAAATTGAAACTTCCGTCCGATTGTGCTATTGGTGCCAATCACTCCAGTTCCTTGACAACGATAAATTCATCGGCTGAAACAGTACTTTCAAGCACAGTGTACACAAACGGAGAGCAAAATATGCAGACAGGAAACGCATCAATCGGCGGAAAAGACTACAACTCCACTTCTACCTCCGCATCCGCATCCGCAGATTGGCACTATTGGTGCCGACTTTGCGCAAAGATTGATACACacagtgaaaatattttctatgaacaTCAACCACAAATAACTTACTCGGGGGGCAAAAGTGACGATAATAGATGTACAATGGCCGTAGcaataggaaaatatttttgcgtacaAATAAAACACGATGACGATCTGCCCAAACTGTTATGCACAGAGTGCATTTCATTGGTAACAACCCTTCTAGATTTCAATGAACGTGTTGTAAAAGTGCAAGAAATGTATGCTGAACTACAAAGTGCTCAATTCATTACCGATACAGATTTTCAGTCTATTCGACTAAAATATGGAATTTTGAAGGAAGATCCAGCTATACAGCACCAACATGAAGAAGAGTGTTTTACTGAGAAAATTGATCAAGCAAGTGTGGCAAACATGCACAAAtttgaaatcaaattaataacgGAAGTCTCAAGCGATGGTATCCAAACAGATGAAGTTAGTCATTCACTTGAATTTGAAGGCACGGAAGGTGAAGATCCATTTGCCAGCGGAGTTGTCGTTGAGACCTCTGAAAACCAGACTCTTCGTGCAATAAAAGAATGTGATCGAGAAAGTAATGATGGTAAATTATCTGATTTCATACCTCTGAATGCACAGAATAAGTTATTAAAAACCGAAATAAACACAAATGACAAGAGAGGATCGTCAAAGAAGGATAAGAAATTGAAGTTAATTGATACTAATCTTAAACGATCTTACAAAAGTAGTTTTGACAAAAAGGTAGAAAAGTGTATTACTGGCTCCGAGGAAAAGTCAACTGATGACAAATACTTTTGTAGCACCTGCTCTCTTCATTTCCAACGTCCTGGCAATTATCGTATacatatgaagaaaagacaTGGAATGGCACTAGAACCTTTGACATGCTCTCAATGTCATAAATCTTTCAAGACAGTATTCGAattgaattttcatataaaaacacATCGTCCACTATCAGAGAAACGAATTCTTCCATGCCCACAATGTGACCGAAAATTTCAGACAAAAGGTTCTGTAGCCAGGCATATAAAGTTTGTTCATGAAGATATTCGTCCATTTATTTGTGAAGAATGTGGAGAAGGAACACGAACCGAAACAACACTACGAGAACATATGCTTATACACACTGACCTGGCACCTTTTGAATGTGAAATATGTaagaaatgtttcaaaaatcaGGCGCGTTTAAAGAATCATATGCAGATACACAGTTCCAGTAAACACATCTGCAGAGAATGTGGCTTACAATTAAATACTCGTGAAACTCTAAATCGACATATGCTAGTACATTCTGATATTATGCGTCATAAGTGTGATTATTGTGGGCGAGCATTTAAGCGTGCGAAAACGCTAAAAAGCCATTTAATACTCCATAGTGGTCTAAAGCCCTATACATGTGACTTCTGTGACAGAACCTTTGCTAATGGGGCCAATTGTCGTACTCACAAAAGGAAATCACATCCGGAAGAATTAGCGGCATTAGAGGCTTCAGGAGAAAAAACATACACGAAAAATATACCCAGACTGGCCGCATTAAAAACAGTaACAAAGCCTATTTGTACTGTTGGCACAAAGGACTCCAATTCGGTGATAAAGATAGATGGATCTGCTGAAACAGGACTTTCTGAAAGTAAAACAATGTTTAATACTAATGATTCAGACACAGGCAACTTTCCAAATGGAATGAATATAGAAGAAGGGCAAGACATGCAAACGACAACGACATCAGTCGGCGAAAAAAGCTTCAACACCACCTCAGCATTCACAGATTGGCATTATTGGTGTCGACTTTGCGCAAAGATTGATACACacagtgaaaatattttctatgaacaTCAACCACAAATAACTTACTCGGGGGGCAAAAGTGACGATAATAGATGTACAATGGCCGTAGcaataggaaaatatttttgcgtacaAATAAAACACGATGACGATTTGCCCAAATTATTATGCACAGAGTGCATTTCATTGGTGACAACCCTTCTAGATTTTAATCAACGTGTTGATAAAGTGCAAGAAATGTATGCTGAACTGCAAAGTGCTCAATTCAGTAACGATACAGATTTCCAGTCTATTCGACTAAAATATGGAATTTTGAAGGAAGATCCAGCTCAATTATACAAGCACCAACATCAAGAAGATTATTTTACTGAGAGGATTGATCAAACAAGTATGGCTAACATGCACAATTTTGAAGTTAAACTAATAAAAGAAATCTCGAGGGATGGCATCCAAGACGATGAAGTTGACTATGCCAAAGAACCTGAGGGAGCTGGAAGTGATCCTTTTGTCAGCAAAATTGGCGTAGAGACCGCTGAGGGCCAGACATTTTGTGCAATAAAAGAATGTGATGAAGAAAGTAGTGACGACCTTGCACCTTTTGAGTGCGAAATATGTAAGAAAGGTTTTAAAAATCGTACCCGCCTTAAGAAACATATGGACACGCACAGTTCTAATAAACACATCTGCAGCGAGTGTGGTTTAAAACTAAATTCTCGTGTGACTTTAAACTTACATATGCTCGTACATTCTGATGTTATGCGCCACAAATGTGACTACTGTGGGCGGGCTTTCAAACGAGCCAAAACGctgaaaaatcatttaatacTCCATAGTGGACTAAAACCTTATTCATGCGATTTCTGCGATAAAACTTTTGCCAATGGGGCTAATTGTCgtacgcacaaaaaaaaaactcatccgGAGGAATTAGCAGCGTTAGAGGCTTCAGGcgaaaaaacacatacaaaaaatataccaaaattggCTGTACTGAAAACtgtAACAAAATCAGCCGAAAATCTTATCCCAGTTGTCTCCAAACAgagtggcaatttttttttaggtagaAAGCCGAAACCTCCACTAGATTATACTGTTGACAGAAAACACTCCAATTCGTTGACAGGAGTAGATGCGTCTGCTGAAACAGTGTTATCGGGGAGCCaaccattttttaaagaaaacagtTTAGACATGACTAGTCTTACGGAGAGGAATAACATACCATCGTCGTTTTGGTaa
- Protein Sequence
- MQTGNASIGGKDYNSTSTSASASADWHYWCRLCAKIDTHSENIFYEHQPQTTYSGGKSDDNRCTMAVAIGKYFYVQIKHDDDLPKLLCTECISLVTTLLDFNERVVKVQEMYAELQSAQFSNDTDFQSIRLKYGILKEDPAQLYKHQHEEDCFTEKIDETSVANMHNFEIKLITEISTDCMQTNEVSHSLEFEGTEGEDPFASGVVVETSENQTLRAIKECDGESNDGKLSDFIPLNAQNKLLKTEIKTNEKGGASKKDNELKLMDTNRKRSHKSSFGIKLEKFITGSEGKSTDDKYFCSTCSLHFQRPGNFRVHMKKRHDIVYELDPLTCPQCQKSFKTEFKLNHHIKTHRPLSDKRIFPCPQCDRKFQTKDSVSTHIKFVHEDIRPFICEECGKGTRTETTLREHMLIHTDLAPFECEICKKGFKNQARLKNHMQIHSSSKHICRECGLQLNTRETLNRHMLVHSDIMRHKCDYCGRAFKRAKTLKNHLILHSGLKPYTCDFCDRTFATGANCRTHKRKSHPEELATLEASGEKTYTKNIPRLSVLKTVTQSAENLIPVVSKQNDDLLLGRKLKLPSDCAIGANHSSSLTTINSSAETVLSSTVYTNGEQNMQTGNASIGGKDYNSTSTSASASADWHYWCRLCAKIDTHSENIFYEHQPQITYSGGKSDDNRCTMAVAIGKYFCVQIKHDDDLPKLLCTECISLVTTLLDFNERVVKVQEMYAELQSAQFITDTDFQSIRLKYGILKEDPAIQHQHEEECFTEKIDQASVANMHKFEIKLITEVSSDGIQTDEVSHSLEFEGTEGEDPFASGVVVETSENQTLRAIKECDRESNDGKLSDFIPLNAQNKLLKTEINTNDKRGSSKKDKKLKLIDTNLKRSYKSSFDKKVEKCITGSEEKSTDDKYFCSTCSLHFQRPGNYRIHMKKRHGMALEPLTCSQCHKSFKTVFELNFHIKTHRPLSEKRILPCPQCDRKFQTKGSVARHIKFVHEDIRPFICEECGEGTRTETTLREHMLIHTDLAPFECEICKKCFKNQARLKNHMQIHSSSKHICRECGLQLNTRETLNRHMLVHSDIMRHKCDYCGRAFKRAKTLKSHLILHSGLKPYTCDFCDRTFANGANCRTHKRKSHPEELAALEASGEKTYTKNIPRLAALKTVTKPICTVGTKDSNSVIKIDGSAETGLSESKTMFNTNDSDTGNFPNGMNIEEGQDMQTTTTSVGEKSFNTTSAFTDWHYWCRLCAKIDTHSENIFYEHQPQITYSGGKSDDNRCTMAVAIGKYFCVQIKHDDDLPKLLCTECISLVTTLLDFNQRVDKVQEMYAELQSAQFSNDTDFQSIRLKYGILKEDPAQLYKHQHQEDYFTERIDQTSMANMHNFEVKLIKEISRDGIQDDEVDYAKEPEGAGSDPFVSKIGVETAEGQTFCAIKECDEESSDDLAPFECEICKKGFKNRTRLKKHMDTHSSNKHICSECGLKLNSRVTLNLHMLVHSDVMRHKCDYCGRAFKRAKTLKNHLILHSGLKPYSCDFCDKTFANGANCRTHKKKTHPEELAALEASGEKTHTKNIPKLAVLKTVTKSAENLIPVVSKQSGNFFLGRKPKPPLDYTVDRKHSNSLTGVDASAETVLSGSQPFFKENSLDMTSLTERNNIPSSFW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -