Afra010188.1
Basic Information
- Insect
- Anastrepha fraterculus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_037575425.1
- Location
- JAYXIM010012633.1:91121-95399[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5 4.4e+03 -0.8 0.1 34 43 203 212 201 214 0.86 2 2 7.3e-15 2.2e-11 45.0 0.2 3 44 623 664 621 666 0.95
Sequence Information
- Coding Sequence
- ATGAACACTCTAGGGCCCAAAAAGGACGGAAGTCCTAatgttgaatttttccaatccACGGAATCATTGCAAGGTTTTGAAACAATTCGTCTGTGGCTACAGAAGAATTGTAAAAAATATTTAGCAAATAATACAGAAACAATCACGAAGGAATCGCTTGCGCAATTGCTAATTCAATTTCTGCAGTATGTGGAAGCCAAACTAGGCAAAAATGCACAAGAGCCACCGGCGACTCGAATCCCGATGCGTTTATTCATGGATTTTAAACCTGGCGGTGGATTATGTGTCATCTTTAGCGCAATGTTTCGATTCCGCGCTGAACAACGtggcaaaaaatttgatttttctatTGGCAAAAACCCTCCACGTAAAGATCCAAATATCCAGTTATTGATTGATATTGAAACGGCTCTCGTTGAGGCAAATCTTTATCCtattcattatatttatatacgacCGGAAGTAAGCAAAGAATTGGCTCAAAGACTGCGTGATATTTTGATTACCAGGCGGGTACAGATCGTAACCGACGAGGAAGAAGCTACACACATTATTTACCCAGTGGTTGATCCACACCCGGATGAATATGCACGTCCAGTTTTTAAACGAGGAAATCATGTAATGTTGCATTGGTATTACTTCCCGGAATCTTATGATTCCTGGGCTATCAACTCATTTGATTTACCGGAATATGTGCCTGAGAATCCTGAACAACCAGCCGAACCATGGCTCGTGTCAGCATCTTGGGTTTTAGATCTGGAACAATATAATGAGTGGATGGTCGAAGAAGACTACGAAGTAGATGAAACAggcaaaaaaaaacgcacaagcATCCGCCGCCGCTCCCCTTCTCCAAACACTTCGAAGCCTGGTAAGCGTAAACGATCACCCGCCGTATTACACAAGAAGGCGCGTAATGATGAAGACGATGAAGACTTGACTCGGGATATGGATGATCCTCCTGCAGAGCCTAATGTGCAAGAGGTTGTAAAGTCATCGTCGCTGCAATCAACTGCCAGTCCAGCTCCTGGCGGAAAGTCGAGAGCCGACAATGATATGATGCCCATTAAagGTGGTACAATGACGGATTTGGATGATGAGATGACAGGCGGCAGTGCAGTGCAAGCCCTTTCCACCGGTGACGGTGAAAATTCACAAACTGGCAAAACAAGTGACAATAGTAATACTCAGGaattctcttcctctgctaaaGAAGATATGGAGGATAATGTTACCGAACAGACGCACCACATCATTGTGCCGTCATACTCCGCCTGGTTTGACTACAATTCTATCCATGTCATTGAAAAACGAGCCATGTCCGAATTTTTCAATGGCAAAAATAAGTCGAAAACACCGGAAATCTATATGGCATATCGAAATTTTATGATTGACACATACAGATTAAATCCCACTGAGTATTTAACCAGCACCGCATGTCGCAGGAATCTTGCTGGTGATGTTTGCGCTATAATGCGTGTCCACGCGTTCTTGGAGCAGTGGGGTCTCATTAACTATCAAATAGACGCTGAGCTGCGTCCAACTCCAATGGGTCCACCGCCTACTTCTCATTTCCATATATTATCAGACACACCATCTGGTTTGCAACCATTGAATCCACAAAAAACACAACAGCCATCTGCAGCAAAAGCTTTGCTTGACTTGGACAAACCAAAGGTTATTAAAGATGGTAAAGAAGGTTCGGTGGAAGGTGATAAACCGCCACTCTTACCTGGCGGTATAAGTATCAAAAGCGAAACTTTGGAGAATGGTGCAACCACTGGCCAGCAATTCGGCTTGAAACTAGATCAATATGCAAAGAAGCCAGCTGCAATGAAAAATCGAACGGCAGCTAACATGACGCGCGAGTGGACGGATCAAGAAACTTTGCTTTTGCTCGAGGGCCTCGAAATGCATAAGGACGACTGGAATAAGGTTTGCGAACATGTAGGAACACGCACCCAAGACGAGTGCATACTgcattttcttcgattgcctaTCGAAGACCCATATCTAGAAGATGATGGTGGATTTTTGGGACCGCTGGGTTGTCAACCAATACCATTTAGTAAATCTGGCAATCCTATAATGTCGACAGTAGCGTTCTTAGCTTCAGTAGTAGATCCTCGTGTAGCCGCGGCAGCTGCAAAAGCTGCAATggaagaatttgctgctataaaGGACGAAGTACCCGCTACAATTATGGATAATCATATGAAGAACGTGGAAAAAGCTTCTGCGAGTGGTAAATTCAATCCATCTTTCGGGCTAGCGAACAGTGGCATAGCCGGCACTGGCGCAGACAAGGAAGACGAAGACGTTCATGGAGTAGGTGCAGTACCAGGATCAATGCCAGTGAACACAGATGTTGCTAATAAGACCGAGACGAAAAATAGTGAAACAGAGTCCAAAAAGAAACCAGATAATGTCTGCAAAAATGGTGCTGAAATTAAAACTGAAGACACCAATGACACAGATACCAGTTCAAAAGATACTGAGGCCGCAAAGCAACAAGTATTTAATGAAACGAATGTTCAGACCGCTGCGGCCGCAGCCCTGGCCTCGGCTGCTGTTAAAGCCAAACACTTGGCTGCTTTGGAGGAACGTAAAATCAAGTCGCTAGTGGCTTTGCTGGTCGagacgcaaatgaaaaaattagaaataaaacttCGACATTTCGAAGAGCTAGAAACAACAATGGAACGGGAACGAGAGGGACTAGAGTATCAGCGGCAACAACTAATAACCGAGCGCCAGCAATTCCATTTGGAGCAACTGAAAGCTGCAGAATTCCGAGCACGTCAGCAAGCCCACCATCGCctgcaacaagaacaacaatggCAAGGAACAGCTGGATCAAATGCGTCAGGCGGTGCGCCACCAGCCAGTAACCCCAATGCCTCCCTCGGAAGTACCGGTAACCTACCGTCTGCAACCGGTCAATCTATAGTAACTGGCGCCACCACCACAAACGCCAATGCACCGCCATCAACTGGTGTAGGCAGTGTTGGACCGCAAGGCGCAACTGCGACGAATCAAGGTACAGCCACATCTGCATCTATAGGTGGCAATGCACAACAAACTACAACAGCACCGCTTGGTTTACCTGTCGCAGCATCGGCTTCTATACAACAGCAAATAGCCACTCCAATGGaCACATCTTCGACATCCATCGCTGTACCGTCAGCTGCTGGAGACGGCGCTACGATCACTGCTCAGACAATTTTGCCACCAGTCGGTGTATCAGCTGGTACATCACTACCCTCATCTGCAAATGCACCACTAGCAAATGTGCAACCAACCATTCCTCCTTGTGGAGCACCACCCGTAGTGCCGCCATCATAA
- Protein Sequence
- MNTLGPKKDGSPNVEFFQSTESLQGFETIRLWLQKNCKKYLANNTETITKESLAQLLIQFLQYVEAKLGKNAQEPPATRIPMRLFMDFKPGGGLCVIFSAMFRFRAEQRGKKFDFSIGKNPPRKDPNIQLLIDIETALVEANLYPIHYIYIRPEVSKELAQRLRDILITRRVQIVTDEEEATHIIYPVVDPHPDEYARPVFKRGNHVMLHWYYFPESYDSWAINSFDLPEYVPENPEQPAEPWLVSASWVLDLEQYNEWMVEEDYEVDETGKKKRTSIRRRSPSPNTSKPGKRKRSPAVLHKKARNDEDDEDLTRDMDDPPAEPNVQEVVKSSSLQSTASPAPGGKSRADNDMMPIKGGTMTDLDDEMTGGSAVQALSTGDGENSQTGKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMSEFFNGKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGLQPLNPQKTQQPSAAKALLDLDKPKVIKDGKEGSVEGDKPPLLPGGISIKSETLENGATTGQQFGLKLDQYAKKPAAMKNRTAANMTREWTDQETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASASGKFNPSFGLANSGIAGTGADKEDEDVHGVGAVPGSMPVNTDVANKTETKNSETESKKKPDNVCKNGAEIKTEDTNDTDTSSKDTEAAKQQVFNETNVQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQGTAGSNASGGAPPASNPNASLGSTGNLPSATGQSIVTGATTTNANAPPSTGVGSVGPQGATATNQGTATSASIGGNAQQTTTAPLGLPVAASASIQQQIATPMDTSSTSIAVPSAAGDGATITAQTILPPVGVSAGTSLPSSANAPLANVQPTIPPCGAPPVVPPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01189365;
- 90% Identity
- iTF_00082869;
- 80% Identity
- -