Afra006669.3
Basic Information
- Insect
- Anastrepha fraterculus
- Gene Symbol
- bab1
- Assembly
- GCA_037575425.1
- Location
- JAYXIM010007455.1:146497-153020[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-17 5e-14 53.0 0.0 1 43 56 99 56 101 0.95 2 2 8.1 1.4e+04 -2.8 0.7 3 13 194 204 192 207 0.78
Sequence Information
- Coding Sequence
- ATGCTGGAGAACTCGCATGCTTGGATGGGCGCTTCGAGCTCTTCGACGATTGCCGCAGACAGTTATCAATATCAATTACAATCCATGTGGCAGAAATGTTGGAATACTAACCAAAGCCTAATGCATCATATGCGCTTCCGTGAACGTGGTCCACTTAAATCGTGGCGGCCCGAAACAATGGCCGAAGCTATTTTCAGCGTACTAAAGGAGGGTCTGTCACTTTCGCAAGCGGCACGCAAATACGACATTCCTTACCCGACATTTGTTTTGTATGCGAATCGTGTGCACAACATGCTTGGCCCGTCCATAGATGGTGGGCCTGATTTGCGGCCAAAAGGTCGTGGCCGTCCACAGCGTATATTACTCGGTATTTGGCCGGATGAACATATTAAGGGCGTTATAAAGACAGTTGTCTTCCGCGATTCAAAGGATCTAAAAGATGATAGTCTGGTACCACATTTACCCTATGGTCGGCATTCGCCCATGTTTCCATTTCAGGATGGTCCCATGAACTATCCTGGCATGAGTGGGCCTTGTCCGAATGGTGTACCGACACCCACCGGTGATCAGATGTCACAGGAAGCCACCGCTGCTGCAGTAGCTGCTGTTGCTCATAATATTCGGCAACAGATGCAATTGGCGGCAGTCGTTCAGCATCAACATCCGTCGGAGGGTCCGTCAGGCTCCAACCTCTTTAACTTACCACCGCATTTACAACCACAGTTAGCTGCCGCGACAGCTGGCTCTAGTGGACCTGCCCCCGGCGGACATGGCTCGGTACCGTTGCCAAAGACGAGTATTTCTCCTGCGCTTAGTACCACATCGAATCCCGGTGCAGGTGCAATGCTTGGACCACGGCATACACTATCGCCTTGTGGTCCTGGTTTGCCAGGCCTACCGCCTAACTTGCCACCTAGCATGGCAATGGCATTACATATGGGGCGTTGCGATCCATCTTCTGTTCTCAGCCAGCAGCAACAGCATCAACTTCAACATCTGCATATGCAGCAACACCAGCACCAACAacatcagcaacagcaacatgCTCTCGGTTACGGTGTTAGTTCCATGCCGCATCACGCAGGAGCATCTGCAGCTTCCATACCAGCCACAGCAACAACATCTTCCAGCCATCTGTACCAGCAACATCAgcatcaacatcaacaacagcaaTCACAAATTCAACAGCAACACCAGCACCATCAATCGGCAAGCATCAGCGACACAGATCCAAAAGTGAAATGTTCATCTCCTGCATCATTACTTGAACATCGTCGGACCAGTCCAAGCAGCGAGTCACATCTACACTCAACCTTGACCGAACTGGGTTTGGACATAGGCTATAAGTCAACGCGCAGCAGCGCTTACTCACCAACACGTCTCTTCTCCGAGGACTTGGCGGCCTTGGTAGGTGCCAGTGAAGATTCCCCGCCTGGCACGACGGCGGCATCTACTATTGTAAGCAGTACCAGCACGGTAACGACTTCGGCAATCACTGGCGGTCGCACGGAAATTAGTATAACCTCCAGCGCAACGAGCGGTAATATAAGTTCCAGTAGTATAAAAACCGAACCCATCACGACAAGTAGCGAATAA
- Protein Sequence
- MLENSHAWMGASSSSTIAADSYQYQLQSMWQKCWNTNQSLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDSKDLKDDSLVPHLPYGRHSPMFPFQDGPMNYPGMSGPCPNGVPTPTGDQMSQEATAAAVAAVAHNIRQQMQLAAVVQHQHPSEGPSGSNLFNLPPHLQPQLAAATAGSSGPAPGGHGSVPLPKTSISPALSTTSNPGAGAMLGPRHTLSPCGPGLPGLPPNLPPSMAMALHMGRCDPSSVLSQQQQHQLQHLHMQQHQHQQHQQQQHALGYGVSSMPHHAGASAASIPATATTSSSHLYQQHQHQHQQQQSQIQQQHQHHQSASISDTDPKVKCSSPASLLEHRRTSPSSESHLHSTLTELGLDIGYKSTRSSAYSPTRLFSEDLAALVGASEDSPPGTTAASTIVSSTSTVTTSAITGGRTEISITSSATSGNISSSSIKTEPITTSSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00082053;
- 90% Identity
- iTF_00082053;
- 80% Identity
- -