Adis024569.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anastatus disparis
Gene Symbol
ush
Assembly
GCA_017163975.1
Location
JAFFSR010000136.1:18329676-18337046[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.019 6.5 10.0 0.7 3 21 306 324 304 329 0.91
2 8 6.6e-05 0.022 17.7 1.3 1 23 366 388 366 388 0.98
3 8 0.1 35 7.7 1.1 3 20 431 448 430 450 0.93
4 8 0.013 4.4 10.5 4.3 2 21 684 703 683 704 0.94
5 8 0.11 36 7.6 0.0 3 20 731 748 729 750 0.91
6 8 0.026 8.7 9.6 0.0 2 23 789 810 788 810 0.95
7 8 0.014 4.7 10.4 1.4 1 23 816 838 816 838 0.99
8 8 0.067 23 8.2 0.5 3 21 953 971 952 972 0.92

Sequence Information

Coding Sequence
ATGGTTCTAGTTGCAAGACGGATTTCCGGATTTAAATgGGAGGATGAGGAGTGGAGTGATTCGGAAAAGACGCCGTCCGTAAGCAGTGGCTTAGAAGGCGGTGGCTCAGCTGTATCAAGTCCTTCGGGTCAAATACCCGAAGAGGAAACATCGGCATCATTAGTTTGCTCGACATTACCACCACCAAGACTTAATACAATATCGACAAGCCTTACAACACCAGATGATATAAGGCTTAGGCTTAGTGTACTGCCTGAGGATGCAAGGAAAAGGCTGGCTAGTCTTACTGATGATTACGAgaGTGCGCGAACGTTACGTGATCAACAACGTAATCAACAACCTTCCCGTCCTAATTCGGTACAAGATTCCAGTCCAAAATCAATTACCCGTGTTGATCCAACGGATGAGGATTCGAACATGGCAGTACGCGAAGAAGAAAATAGCGCAGGTAGagcatcatcgtcatcgtcgtctGTTGGCTCAAATTCAGCAGTCATTAGCTCAAATCGTCGTAATCGTGATATACGACGGGACTCCGAAGATTCAAGACGAGGTTCATCCGACGAGGTGACGGTTGTCGAAgctaaaagaataaaattagaCGATGATAATACgacaacaataacaacaacatCAACACCGAGATTGAGACTGAATGCTAGTCTGGCAACGGATCCGGCATTAAGACCGCAAGCTGTTGCCGCTCTTACAATCAAGCCTGAAAATCCAGCTTCACCGCCTAATTCTACACCTCCGTTATCTGCTGGACTTCAAAATgcGATAGCGACAGGTCGTTTATTCGTGCTTCCCAATGACGGTAAAGATAGTTTAACAGTCGAGGCATCAGCGGCAGCGGCAGCCGCGGCAGCAGCATCAGTAGTAGCAGCGTCGGTACCAAGACCACCGGCATTATTTTGTCCACCATGTGGCATACGTTTTAGTTCAGCTAGTACATTAGATGcgcatcaaaaatattattgttcGCATCGTCCAAGATTAGAAAGCGATGCCGAGAATAACGATGACGACGATGATAAGAATACAACATCTGGCAATGCCAGTGGCTCGAGTAATAAATTTGAATCGCGTAAAGCTTATGCTTGTCCACATTGTTCTTACAGTGCCGATAAGAAAGTATCGTTAAATCGACATATGAGAATGCATGCCTCATCGCCTGTACAACCTGTACAACCTGCTCCGACGATGCCTATTAGTACAACACAAAATACTGGACAACATAATAGTACCAACGCGTCTAATGGTTCTTTAAATGAAGAAGCTGAAAGATACTGTCGGAACTGCGATATTAGgTTCAGCTCATTGAAAACGTATAGGGCGCATAAAGCTCATTATTGTAGTACGAGGCACGTTGTAAAAGATACACCACCAGCGGCAACCTCAACAACATCATCGTCATTAAAAGGTTCACCACCAACAAGTTCAAGTCCTGGCGATTCACCACCACCGCTACCATGTTTAGCATTGCCGACTAATCCGATCTTAATAGTACCGTGTTCATTGGTGCGTAGCGCATCGTTACTTGCAGCACCTGGTCTTCCAGCACCCGATACACCATGTTTTTTATTACCAAATGGCACACTTCAACCAATGACACGTGGATTAACAGCAGTAACAACAACTCCTACACCAACAACAATATCATCGAATCTTGTATCAATCGATACACCAACAACACCTAGCGTTTCATCCAGCGTACTTAGAACAGCTAATAAACCTGCTACACCTGTTGCCATTGCTCCTGTTACTTCAAATTCGCCTAATAGTTCATCATCCACGCCACTTGATTTGAGTGTTAGAAGATCACCGGATCACGAAAAGGAGAATCGAGTCTCACCTATGCCGTCTTCGCTGCCACCGCCTCCGGGTAGTCCAAGATCAAGAGGAAGTGCTAGTCCACGTACGAGGTCTTTGCCAACGGCTCAGGCACCCGATCGTATTCCACCAACGCCGCCTACCGAATTAGCGCTTAGACTTGCGGAACTACCGCCTCCACCTGTTCCTGGAGTACTTGTCAAACAAGGTGTATCAAGATGTAAAGAGTGCAACATAGTGTTCTGTAGACATGAAAATTTCATTGCTCATAAGAAACACTACTGTCAAGCACGCGAGAGTAGCGTTACGAGTCCACCACCACCAGGTACACCTTCACCACCTCTTGTTCAATTAATTTGTGCGGCATGTGGCATTAAGTTTGCTTCAATGGATAATCTTGTGGCACACCAAGCCTTTTATTGTCCAAAGAGACCTGATTCTCAAGATCATCATTCGAGATGTCCTAAGTGCAAGGCGGTAATAGAAGCAGGCGTCTCACACACGTGTACAAGTAGCCAAACAGGAGGTTGGAGATGTCCAGTTTGCGGAGCAGTAAGCCCAACTGCAGGTGCTGCTCAGCGTCATATGGATGCTCATCAAGGAGTCAAAGCATTTAGATGTACGATTTGTCGGTATAAAGGCAACACGTTACGGGGTATGAGGACACATATAAGAATGCATTTTGAGAAACGAGGAGCTGATCTCCaggagGAGAATTACATAACATGTGTATTAGAAGACGACGTTACTGCACCGACTCCTGAGCCAGCCCCAGCTACCACACCTGAAGAAATATCATCGGATCCACAACAAATAAATGGCAAAACAGAATCAGTAGTTCGTAAAAGTCCTCAACCAGCTATACAATTATCAACGTCACCAGCTGCATCACCAGCACCAACGGTACCATCGCCCGCAGCAAGTTCCGGCAAAGTTAAACAAGAACGCGAAGATACACCACCACCGCCGGTTACACCAACTTCAGACGAAAGTCTCGACGTAACCAAAAGTGGTCCACGCTATTGTCGTTCTTGTGATATAAGTTTTACATATTTGAGCACATTCATTGCTCACAAGAAATTTTATTGCTCGAGTCATGCAGGCGAAGGTagcaacaataataacaataataataatagtactaCGGCGGCTGCAACTGCAACGGCAGCTACGACGCCACCAGCTGGACGCACCGAGGCATCTGTACTTTAA
Protein Sequence
MVLVARRISGFKWEDEEWSDSEKTPSVSSGLEGGGSAVSSPSGQIPEEETSASLVCSTLPPPRLNTISTSLTTPDDIRLRLSVLPEDARKRLASLTDDYESARTLRDQQRNQQPSRPNSVQDSSPKSITRVDPTDEDSNMAVREEENSAGRASSSSSSVGSNSAVISSNRRNRDIRRDSEDSRRGSSDEVTVVEAKRIKLDDDNTTTITTTSTPRLRLNASLATDPALRPQAVAALTIKPENPASPPNSTPPLSAGLQNAIATGRLFVLPNDGKDSLTVEASAAAAAAAAASVVAASVPRPPALFCPPCGIRFSSASTLDAHQKYYCSHRPRLESDAENNDDDDDKNTTSGNASGSSNKFESRKAYACPHCSYSADKKVSLNRHMRMHASSPVQPVQPAPTMPISTTQNTGQHNSTNASNGSLNEEAERYCRNCDIRFSSLKTYRAHKAHYCSTRHVVKDTPPAATSTTSSSLKGSPPTSSSPGDSPPPLPCLALPTNPILIVPCSLVRSASLLAAPGLPAPDTPCFLLPNGTLQPMTRGLTAVTTTPTPTTISSNLVSIDTPTTPSVSSSVLRTANKPATPVAIAPVTSNSPNSSSSTPLDLSVRRSPDHEKENRVSPMPSSLPPPPGSPRSRGSASPRTRSLPTAQAPDRIPPTPPTELALRLAELPPPPVPGVLVKQGVSRCKECNIVFCRHENFIAHKKHYCQARESSVTSPPPPGTPSPPLVQLICAACGIKFASMDNLVAHQAFYCPKRPDSQDHHSRCPKCKAVIEAGVSHTCTSSQTGGWRCPVCGAVSPTAGAAQRHMDAHQGVKAFRCTICRYKGNTLRGMRTHIRMHFEKRGADLQEENYITCVLEDDVTAPTPEPAPATTPEEISSDPQQINGKTESVVRKSPQPAIQLSTSPAASPAPTVPSPAASSGKVKQEREDTPPPPVTPTSDESLDVTKSGPRYCRSCDISFTYLSTFIAHKKFYCSSHAGEGSNNNNNNNNSTTAAATATAATTPPAGRTEASVL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-