Adis096846.1
Basic Information
- Insect
- Anastatus disparis
- Gene Symbol
- -
- Assembly
- GCA_017163975.1
- Location
- JAFFSR010000381.1:9210129-9213785[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00072 0.24 14.4 0.7 1 20 131 150 131 151 0.96 2 13 0.016 5.3 10.2 4.6 2 23 290 312 290 312 0.91 3 13 0.14 48 7.2 0.7 7 23 379 396 375 396 0.92 4 13 4 1.3e+03 2.7 5.8 3 23 482 503 481 504 0.68 5 13 0.02 6.8 9.9 0.7 1 23 551 574 551 574 0.96 6 13 0.0036 1.2 12.2 0.0 3 23 623 644 622 644 0.90 7 13 0.0014 0.48 13.5 0.2 2 23 673 695 673 695 0.92 8 13 0.013 4.3 10.5 3.7 2 23 737 759 736 759 0.96 9 13 0.032 11 9.3 2.8 2 23 773 795 772 795 0.94 10 13 2.9e-05 0.0098 18.8 0.5 2 23 840 862 840 862 0.96 11 13 0.038 13 9.0 0.5 1 23 950 974 950 974 0.98 12 13 0.00055 0.19 14.8 0.1 2 23 990 1012 989 1012 0.96 13 13 8.7 3e+03 1.6 0.8 1 23 1086 1110 1086 1110 0.89
Sequence Information
- Coding Sequence
- ATGTCGTCAAGCCAGGAGACATGCCACTCGGTAGTGGTCGAACCGACGGAAATCGATAGCGAAGAGGGTTCGAGTTGTGAGGAGCAACGCAGTGAATCTCGCAGGCGGTTACTTCCCAGCGGCGCCGGTGATGTTGACTGCCTTCCAAAGAAACGCCGAAAACAATCAACTCCCATCAAATTTCCGACATCTTTGCCAGTGGCAGCCAATGTCGTTGCAGAGGGCGATGAATCCGAAGTAGAATCCACTACGGACACCAACAATCATCTTGATCAACAATTACAGGAGTATAATCAGGAAGGTAAGACGTCGCCGATGACGAACTCGCTGCATTCAAAATCCATCCAGAGTCATCTCCCAACGATCAAAgacgaaaatttaaataatgaatttcgCTGCCAGTATTGTAGTCAATTTTTCGATAACCGCGACAATCTCGAGCTTCACCTCGAGTGCGAACATAATTTTGGTCTCACAAATAGTAATGTTATGCTACCGAGTAATCGCAATTCGCCGCATATACAACAAGCTCAGACGCGGATGAGCCCAGATTCAGCTCAGAATATTTCTGAACAGCAACAGCAACCGATTAGTCCGATTAATCTTTCAGGTATTAGCATTAGGAACTTCGCAGCAGCAAATACAGCTTGGCTAACAGCGGGTCAAAGCCAAATGCCACAATCACCAAATGAACCTTCATTAGCTAAATTAGCTGCATcgcgaaataataattttcaatcaatgCCAGCGGGTTTTCCGGGTCCATTAGCTCAGTTCCTACCGATGCCAGGTTTCCCTATGCCAGATTCGACGCAAATTCAACGAGCAGCTATGGGCCATTTTCCTAAAATATTTAACCCTGATGCTTATTGTGATCTTTGTAATAAAGAGttctgtaataaatattttcttaaaactcATAAAGCCAACAAACACGGTATTTATATGGATCCACCCATTGGTCAACCTCAAGGTAATGATGGTCCTCCTACGAGTCCTTTTTTAGCCACTTCTAGTCCAATTGGAAGTTTATCGTGCAATCTTAATATGAAAACAGCCGATCAACCTCCGAGACTTGAAAATAATGGAAtccagcaacagcagcaacagcTAATAGTACCTTGCGATGTGTCTCCAAAACGATTTAAGAATGAAGACTCCTTGAGAAAACATCGACATAAAATCCATATGAATCAAAATAGTGATATTGACCCTTCTCAAATGTCAGTATCTCTTGCTTCATCATCAGGAGAAGAAGAAAGGCAAAGTCCCGGTGGTATGGAGGcactttttaaacaagaatacAATTTAGATCAAGATGAGACACCTTATACTCCCACTTCGAGACCTGTATCTATGTCACCTCAATCTTCTCAAACTAAAGACTCTCCATTCAATGGTGAACGCTTACGTCGTTCAGGTGTCATGAATCCTGAGGCTTTCTGTGAAATGTGTTGTAAAGAATATTGCAACAAATATTTTCTTCGTGCACATAAACTTAAACGTCATGGTATTTTTATACCAGACAATGAAAGATCACCGACTACTCCAGGCTCTGCTTCGTGGCATCAAATACAAACAAGTCCCTTAAACCTTATTATGGCTGACAGCCTTGGAAATGACTCGGAATCCTGTGATCGAACCGAGGAGTATGCCTGCAGGTCTTGCGGCATTCGATTTCAAACGCAGGGACTTTATCATGtacatattgaaaaaattcatgagAATGGAGAACAATTATCGCCGAGGCCTGATCAAGAAATGGATTCAATTGATCAACGACCTGAATCTATCTCTGAAGATTTGCAAAAGTTGCAAACAATGATTTTACAGCTAAATGGCTTAGAATCGAATAAAGCAGCTTCCTGTGCACTCTGCGGCAAAGATTACGATACCCCTGCTGCATTAAGAAGTCATATGGTCGCAGAACATGGAGTAGTACCTGAAAATTTAACATCACCTCAACAACAATCAGCTAGAGAGAAATCATCGCCCATCGCCATGACTCCTCAAGCTTATTGCTCCCTCTGTGATCGGGACTATCCTAACCAAGAAGCTTTGAGGAAACATATTACAGAGGATCATCAGCCATCAACACCAACAAGTTCCACACCTCAGCTTCCATCATCTGTTCCTACAACACCTAAGTCGAATTCTTCTCAACAAGGAGATCGTAAAATTACTACATCTATTGCACCTACGTCAAGCTACTGTGAAATTTGCAATAAAGAACTgtgcaacaaatattttatgaagacGCATATGCAAAAGATGCATGGTATTGAAATCGAAAATGGTGCTCAAATTGGAGGTGTTGTATGTAATATCTGCAAAAAGGAACTTTGTAGTAAATACTTTCTCCGTGTCCATAAACAAAATACTCATGGTATAATTGAAGAAGGTGCAGCTGCTGGCAGACAAGATAACTTCGAACCACCACCAAATGCAGAAGATGTAGCACTTAGGCCCGAGCAGCTTGGTGATCTCAATCTTCGGTATATAACTCATTTCACAGAAGTTTGTCCGAAATGTAATCAACGTTTTCGTAGCCCCAAATGGCTCAAAGTACATTTGCAACGTGAGCacaatataatagaaacagacAAATGGCGTGAAATTGAACAATATCATCAATCCATGCCTAAAACACCTACTCGAATACTTGGTATTTCTAAAACTACGCCGCCActacagcaacaacaacagtCTCAAGCTAATACTAGTCTTAAGATACCAAACGGTTTTGAACATAACCAGCAAATTAGAAATGATTTAACAGCATTGGGTAACCAAGTTCTTTCTAATTTCTTTGGTGGTGGCTCAAATGATGACCAGCCAGCTCAAACGTATCGTTGCTCTCAACTTAACTGCGGCTTTTCTACATCTAATTTGTCAGTTTTCATCATACACGAAAGATCACATAACCATCAACAGGAGGGTGCAGTATTAGAGAATGAACGAATGTTACCATGTCCAATATGTGCTCAAACTTTCCCGCAGCTAGAGATGTTAAGACAACACGTGAATACTCGGCATCCACTCCCGGGTTTGTTCTCACAATTCCCAATACCATTATTGaacgaatttttaattactaatgaaCAACAtcagcagcaacaacagcagcaggAAAGAAATGATTACGAAGTGAAAGAAGAACTACGCCAGTCAAGTCCTCAGATTATGAATGAaattgatacaaataaaataaaaaagcaagaaGAAAACGTGGTGCAAGTAATGCCACAAGGTAATTACAAGTGTGGCTTTGCTCAATGCATCTATACCACAGCTAACTTAAACCGCATCAAAAAACACATTAAAACTCACACAAAAGATCATAAGAATCTAGGAGATCCGGTTGAAACAGCTTTGGCTGAACTGAGCAAGACTCTTAAAGATGTAGCTAATAAACATAAGGTACCAGCAAGTTATGCAATGCCTCAAGATACAAATCTTACTCCCGATAAGACGATTATGCAGCCCTTTATCATTGAAGAATTAGATACTATTCTTCACAATAATACTGGCAACGGTTGTAATAATGACGAAGGATCGAATTCTACAAAACGTTTTGCGCCGGCTCTCGTATTCCTGCCAGTCAAAACAAGGGTAAGCGGTGCCCTCACTCTATCCTTCACATTAAATCCCGCCTGA
- Protein Sequence
- MSSSQETCHSVVVEPTEIDSEEGSSCEEQRSESRRRLLPSGAGDVDCLPKKRRKQSTPIKFPTSLPVAANVVAEGDESEVESTTDTNNHLDQQLQEYNQEGKTSPMTNSLHSKSIQSHLPTIKDENLNNEFRCQYCSQFFDNRDNLELHLECEHNFGLTNSNVMLPSNRNSPHIQQAQTRMSPDSAQNISEQQQQPISPINLSGISIRNFAAANTAWLTAGQSQMPQSPNEPSLAKLAASRNNNFQSMPAGFPGPLAQFLPMPGFPMPDSTQIQRAAMGHFPKIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYMDPPIGQPQGNDGPPTSPFLATSSPIGSLSCNLNMKTADQPPRLENNGIQQQQQQLIVPCDVSPKRFKNEDSLRKHRHKIHMNQNSDIDPSQMSVSLASSSGEEERQSPGGMEALFKQEYNLDQDETPYTPTSRPVSMSPQSSQTKDSPFNGERLRRSGVMNPEAFCEMCCKEYCNKYFLRAHKLKRHGIFIPDNERSPTTPGSASWHQIQTSPLNLIMADSLGNDSESCDRTEEYACRSCGIRFQTQGLYHVHIEKIHENGEQLSPRPDQEMDSIDQRPESISEDLQKLQTMILQLNGLESNKAASCALCGKDYDTPAALRSHMVAEHGVVPENLTSPQQQSAREKSSPIAMTPQAYCSLCDRDYPNQEALRKHITEDHQPSTPTSSTPQLPSSVPTTPKSNSSQQGDRKITTSIAPTSSYCEICNKELCNKYFMKTHMQKMHGIEIENGAQIGGVVCNICKKELCSKYFLRVHKQNTHGIIEEGAAAGRQDNFEPPPNAEDVALRPEQLGDLNLRYITHFTEVCPKCNQRFRSPKWLKVHLQREHNIIETDKWREIEQYHQSMPKTPTRILGISKTTPPLQQQQQSQANTSLKIPNGFEHNQQIRNDLTALGNQVLSNFFGGGSNDDQPAQTYRCSQLNCGFSTSNLSVFIIHERSHNHQQEGAVLENERMLPCPICAQTFPQLEMLRQHVNTRHPLPGLFSQFPIPLLNEFLITNEQHQQQQQQQERNDYEVKEELRQSSPQIMNEIDTNKIKKQEENVVQVMPQGNYKCGFAQCIYTTANLNRIKKHIKTHTKDHKNLGDPVETALAELSKTLKDVANKHKVPASYAMPQDTNLTPDKTIMQPFIIEELDTILHNNTGNGCNNDEGSNSTKRFAPALVFLPVKTRVSGALTLSFTLNPA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -