Adis031585.1
Basic Information
- Insect
- Anastatus disparis
- Gene Symbol
- -
- Assembly
- GCA_017163975.1
- Location
- JAFFSR010000218.1:12970996-12976121[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 2.5e-05 0.0084 19.1 0.2 2 20 85 103 84 105 0.94 2 14 3.2e-06 0.0011 21.9 2.1 1 23 112 135 112 135 0.98 3 14 0.0086 2.9 11.1 0.9 2 23 207 229 206 229 0.95 4 14 0.0052 1.8 11.7 0.4 2 19 239 256 238 258 0.94 5 14 0.0011 0.36 13.9 2.7 1 22 297 318 297 318 0.96 6 14 0.0021 0.71 13.0 1.9 1 23 326 349 326 349 0.92 7 14 0.032 11 9.3 0.2 3 21 361 379 360 380 0.95 8 14 0.0048 1.6 11.9 3.4 2 23 388 410 387 410 0.94 9 14 2.9 9.7e+02 3.1 1.2 1 12 473 484 473 487 0.84 10 14 0.0078 2.7 11.2 1.0 2 23 502 524 501 524 0.96 11 14 0.00084 0.29 14.2 0.4 1 20 534 553 534 555 0.93 12 14 0.0001 0.035 17.1 3.3 1 23 563 586 563 586 0.97 13 14 0.62 2.1e+02 5.2 1.0 3 21 597 615 595 616 0.88 14 14 3.6e-05 0.012 18.5 0.7 1 21 625 645 625 646 0.96
Sequence Information
- Coding Sequence
- ATGTCAAACGTAGTGTTTATACAATACAATTCAGATACtgATGAAGAAATAGATATTGAATCTATTGATTCTCCATCGTTATTCAACATTTcggaaaataatacaaatatacatAATGAAAACTGTgACGATACCGGTAATAGATTCAATGGCTCGAATATTGATGCTGCCGAGGAAGGAAAGGATGCGCCTGAAGAACCAGTTTCAAATCTGTCAATGACAGAATGCGAATCAGATAAGAACGCCGAGGTGAAATGTTCGGAATGTGGAAAAACGTTCCAAGATCCTGATCATCTCAAATTGCACAAAGCGATATGTGGACTGATTTCCCAATTTGAATGTAAattttgtacaaagaaaattTCTACTCCGAGTAATTTAAGAAAGCATATAAGAAGAATGCATcccgaaaaattaaaaaatgctgaTTCGCCTGATATCACACAGAAAACTCGTAAAAATGCTGATTCACCTGATATCACACAGAAAACTCGTAAAAATGCTGATTCGCCTGATATCACACAGAAAACTCGTAAGAATGCTGATTCGCCTGATATCACACAGAAAACCCGTAAAAAATCAAGAGCGCTTGAAGTATGTGATCCTCGGGAAATTTTACATTGTGATGATTGTGATTATACGGCATCGGTGAAAAGTAAAATGAATGAGCATATACAAAGAATGCACACAGAGATTGATCCAAAAAATTTAGTAAGATGTCCAAAATGTGATAAAGGATTCAAATTGATGCACAACATGAGGAATCATGAAGCGTATTGTGTGTTTGCTACAGCAGCAGTACAATATTGTCGAAATTGTGAAGTAACAACTAAAGTTACGAACGCATCAAATTCGGATAATTGttcaaaatgtaaaaagaaaatggtGTTCAAGTGTAATGATTGCCAGAGATGTTACGAGTCATCATCGGGATTTTCTCTGCATTTGAAAACTAAATGTGCTATGCCAACGTCCTTTCACTGCGACCAATGTGACAATAAATATACAATCAAAGACAACTTACGACGACATATATTTGCCGAGCATGTGGATAAAGTGGATGAAAATGGTTTGGTGGCCTGTGACAAATGTGGAAATCAATTTAAAGGTAGACCTAATATGTTGAAACACCGGAGAATCTGTGGCTTGGGGgcatttttaaaatgcaaattttgtaacttcaaaacaaaatacaaaCCTAATCTTAGAAAGCACATATTACAATTTCACGATGatgttaataaaagtaaagttgAGCAAATACTCGACGAAATATTGAAACAGGCAAGGCAAAAAATAAAAGAAAAAGATATAAACACTAAACTTGAAGCTATACCTATAATTGTAAATGGTATGAAAGTTATTTCTATAAGAATGAGCAAAGAAGAAAAGcttgctGCGATGCATCTCATTGAATATTATTGTCGGAAATGTGACAAATCAGCCTCATATCAAGAATTCGTTCCTAAAAGATGTTCAGTTTGCCATACTAAACGCTTTCTTCGCTGTAGAAAATGTTCCAAGCAATCTGTATCTCTTGACAAGTTGAAAATTCACATTAAATCTGAACACATGTTGGCTGAGCATCAACGCCGATTGCACCAGTGTGTAGAATGTGGCAAACGTTTTAACttcattgaaaatttacgtTATCATTGGGAAGTCTGTTTGCAATCGACACCTAATTTTCATTGCGATGATTGTGACTTTGCTACTAAAACGAAAAAAACATTAACTAATCATATAAGAAGACTACATTTGGGTATAGATATGAGCAAGAAACATTTGTGTAAAAAGTGTGGGTTGAAATTTCTAAGCATAGAATATTTAGAAAAGCATTCAAAGAGCGACACTTGCCGTGATGCTAGTATATACAAATGTGATCAGTGTGGTGCTATTTTCAGATCACAGCATAAATTAACGGAACATATTAAATCAAAAATCGTTAAACAATAA
- Protein Sequence
- MSNVVFIQYNSDTDEEIDIESIDSPSLFNISENNTNIHNENCDDTGNRFNGSNIDAAEEGKDAPEEPVSNLSMTECESDKNAEVKCSECGKTFQDPDHLKLHKAICGLISQFECKFCTKKISTPSNLRKHIRRMHPEKLKNADSPDITQKTRKNADSPDITQKTRKNADSPDITQKTRKNADSPDITQKTRKKSRALEVCDPREILHCDDCDYTASVKSKMNEHIQRMHTEIDPKNLVRCPKCDKGFKLMHNMRNHEAYCVFATAAVQYCRNCEVTTKVTNASNSDNCSKCKKKMVFKCNDCQRCYESSSGFSLHLKTKCAMPTSFHCDQCDNKYTIKDNLRRHIFAEHVDKVDENGLVACDKCGNQFKGRPNMLKHRRICGLGAFLKCKFCNFKTKYKPNLRKHILQFHDDVNKSKVEQILDEILKQARQKIKEKDINTKLEAIPIIVNGMKVISIRMSKEEKLAAMHLIEYYCRKCDKSASYQEFVPKRCSVCHTKRFLRCRKCSKQSVSLDKLKIHIKSEHMLAEHQRRLHQCVECGKRFNFIENLRYHWEVCLQSTPNFHCDDCDFATKTKKTLTNHIRRLHLGIDMSKKHLCKKCGLKFLSIEYLEKHSKSDTCRDASIYKCDQCGAIFRSQHKLTEHIKSKIVKQ*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -