Adis096582.1
Basic Information
- Insect
- Anastatus disparis
- Gene Symbol
- -
- Assembly
- GCA_017163975.1
- Location
- JAFFSR010000381.1:5246513-5249710[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0011 0.37 13.9 0.9 1 23 163 186 163 186 0.96 2 15 0.36 1.2e+02 5.9 1.5 1 23 196 219 196 219 0.95 3 15 0.024 8.3 9.6 0.9 1 23 260 283 260 283 0.95 4 15 0.00079 0.27 14.3 1.7 1 20 296 315 296 318 0.93 5 15 1e-06 0.00034 23.4 1.4 1 23 326 348 326 348 0.97 6 15 0.0039 1.3 12.1 0.1 1 23 354 376 354 376 0.97 7 15 0.0003 0.1 15.7 2.8 1 23 382 405 382 405 0.95 8 15 0.065 22 8.3 3.2 3 23 536 556 534 556 0.96 9 15 0.18 61 6.9 6.6 1 23 565 588 565 588 0.94 10 15 0.0052 1.8 11.7 3.9 1 23 594 616 594 616 0.96 11 15 7.7e-05 0.026 17.5 1.2 1 23 621 644 621 644 0.96 12 15 0.0015 0.51 13.4 0.6 1 23 650 672 650 672 0.98 13 15 0.0023 0.78 12.9 4.3 1 23 676 699 676 699 0.96 14 15 0.0053 1.8 11.7 0.3 3 23 707 727 706 727 0.98 15 15 3.5e-05 0.012 18.6 1.2 1 23 733 756 733 756 0.97
Sequence Information
- Coding Sequence
- ATGCAAAATCACGAAGCTGGCTTGGCAGAAAATGTTTGCGATGCATCAATCACAGTTAAAACAGAGATCCCTGACCAATCGGAAGAATCAACATCATCTACTTTGGATACTCATTCAagGGAAACATTAAGATCGCCCAATCATACTAAAtctaataaagaaaatacaacGGAAACAGCTAATCAGAGTAAGTCACCTACAAAGAAACTAAAACCTAATACTCCTAAAACCTCACCATCCATTATCAAAAAATCCAATAACCGCGATTCGATCAATAAATCAATCAACGACGATGATGAAAAAATCGATTCATCTGACGAGGACAAAGAAGATTTAATGACCAAGCTTGCCGTATACAAACAATTACCAAACGGCACCTTTAGTTGCGAGCTTTGTAACCAAGCCAAAGAAAGCAAAACAACAATAGCCGATCAAAAATCACTGATTGTTCGCCATATGTTACGAGCTCATACTTATTGCTTCAATTATGAATGCTCGTATTGTCAAGATACGTTTAAAAGAGAGGTTTGGTTGAAAAATCATACAGAAATGACGCATTACAATGCCGATGATCATACGCAATTTTACGAATGCGCCAAATGTAAACATAAgagtataaatgaaaatttattaagattgcATGCTTTAAGGAAACACGCAGCAATATATAGATACGTTTGTAAATGTTGTGCTAAATGCTTTAAAACTTGGCCAGCTAAATACGAgcatgaaaaaatcaataataaagaTTGTAAGAAGCCTAGAATAAAGCCAAGATACGTCTGCGATAAGTGCGCCTGCATTTTAAGGACAAAACAAGAATTAGTCAAACATCTGAAGGACGTTCACTctgaagatttttataaaaatGGTGCTAAGCCTCTACACAATTGCAAAGACTGTAACAAAGTTTTTATGTCACGCAAATCCTTGTTAAATCATTTGCCATTGCATCAAGAAAACGAGCAAACAGGATTTGCGTGCGATGATTGCGGTAAACGTTTGTCAAGTCGTGATCATCTTAAGAAACACGTACGCGTTCACAGTGGTGAAAAGCCTTACCCATGCCTCGAATGCGGTCGTGCATTTGCATTACGCACTACAATGAGAATTCATGCATTATCTCATAGCGGAATTAAACCTTATGTTTGCCATCATTGCCGTTTAAGCTATTCTCAAAGATCTGCGCTTATGATCCACTGGAAAGCTAAGCATAAGGGTTTACCTGCACCACCACCTATTGAGATTCATCATTATTTCGACCAGGATGGCAAAGTATTGGTTCCTTGTAAgAAATACAGCACACGTTGgtacagaaaaaaaagtatcacCTCCAGGATAAGAGTACGAGCACCTTCAGAACTTAGCAATACTCATCCTGTCATACTTGAACAAACTTTAAGCAATAAAATGTCCAAAAGATCACCTGTTAAACGAAAATTATCAGATTCGCTAGAAATTCCTGAGTCTTCTAAGACTCCCGCAAAAATAGCGAAATCTGAATGTACATTTGAAGTCAAAGAAtctcaagaaaattctttaaatatgaaaaaaaaatcttctgaACCTCTtatgtacaaaaaattaaaaactggtGGCTTTGGTTGTAAAGTTTGTCTTGAAAAGTTTAGCCATCGTTATAAGCTTACTTTACATTCAAATCAGCATCGTGAGAACAGTAACGATTATCTGTTCTGCTGTGACAAATGTGATTACAGAGCCAAAtctaaacattatttaaaaactcaTGAAATTCGAAAACATACAAACgaatataattttgaatgtGATCATTGTAATAAAcgtttcaaaatgaaaatggatCTTAAGTTTCATTTAGGCACACATGGTCAATCTCAACATATGTGCGATGCTTGTGGACGTATGTATACTAGTCAAGATTCTCTTTACAAGCATCGCCGAGTTGTTCATGTTAacgaatataaatttcaatgcgAGGTTTGTAATCAAAAGTTACTAACggaagaaaatttaaagaatcatATGAACTCGCATAAAAATCTCCATAGCTGTGATGAATGTGATctgaaattcacaaaaagatATTACGTTACGAGGCACAAAAAGCGCGTGCACAaagttgaaaagaaaaatctttgtCCAGTTTGTGGAAAAGCATTTGTTTGCATGGCTACGTTAAGAGTGCATTATTTAACTCACGCTAAAGTTAAACCGTATATATGTAATGTATGCGGATTTAGTTTCACTCAACGATCATCGATGATGTTACATTGGAAAAGAAAACATCCAGACGCTGAAGGTCCACCACCACCAGTAATACTCACCAATTTCTTTGATACCATACAATCTGAAGTACATAAACTTGTTGAAACAACGCCACAGCAACCTTCTAACTAG
- Protein Sequence
- MQNHEAGLAENVCDASITVKTEIPDQSEESTSSTLDTHSRETLRSPNHTKSNKENTTETANQSKSPTKKLKPNTPKTSPSIIKKSNNRDSINKSINDDDEKIDSSDEDKEDLMTKLAVYKQLPNGTFSCELCNQAKESKTTIADQKSLIVRHMLRAHTYCFNYECSYCQDTFKREVWLKNHTEMTHYNADDHTQFYECAKCKHKSINENLLRLHALRKHAAIYRYVCKCCAKCFKTWPAKYEHEKINNKDCKKPRIKPRYVCDKCACILRTKQELVKHLKDVHSEDFYKNGAKPLHNCKDCNKVFMSRKSLLNHLPLHQENEQTGFACDDCGKRLSSRDHLKKHVRVHSGEKPYPCLECGRAFALRTTMRIHALSHSGIKPYVCHHCRLSYSQRSALMIHWKAKHKGLPAPPPIEIHHYFDQDGKVLVPCKKYSTRWYRKKSITSRIRVRAPSELSNTHPVILEQTLSNKMSKRSPVKRKLSDSLEIPESSKTPAKIAKSECTFEVKESQENSLNMKKKSSEPLMYKKLKTGGFGCKVCLEKFSHRYKLTLHSNQHRENSNDYLFCCDKCDYRAKSKHYLKTHEIRKHTNEYNFECDHCNKRFKMKMDLKFHLGTHGQSQHMCDACGRMYTSQDSLYKHRRVVHVNEYKFQCEVCNQKLLTEENLKNHMNSHKNLHSCDECDLKFTKRYYVTRHKKRVHKVEKKNLCPVCGKAFVCMATLRVHYLTHAKVKPYICNVCGFSFTQRSSMMLHWKRKHPDAEGPPPPVILTNFFDTIQSEVHKLVETTPQQPSN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -