Adis038027.1
Basic Information
- Insect
- Anastatus disparis
- Gene Symbol
- -
- Assembly
- GCA_017163975.1
- Location
- JAFFSR010000227.1:21801587-21806518[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.13 44 7.3 6.1 1 23 358 380 358 380 0.98 2 19 8.6e-05 0.029 17.3 1.0 1 23 429 451 429 451 0.98 3 19 0.035 12 9.1 0.4 1 20 504 523 504 525 0.94 4 19 0.0085 2.9 11.1 0.6 2 23 566 587 565 587 0.97 5 19 0.0062 2.1 11.5 0.1 1 23 622 644 622 644 0.96 6 19 0.00042 0.14 15.2 0.1 1 23 650 672 650 672 0.98 7 19 9.9e-06 0.0034 20.3 1.5 3 23 717 738 716 738 0.95 8 19 0.00099 0.34 14.0 0.4 2 23 746 768 745 768 0.95 9 19 0.00017 0.059 16.4 1.2 2 19 795 812 794 817 0.89 10 19 8.7e-05 0.03 17.3 1.3 1 23 849 871 849 871 0.94 11 19 0.4 1.4e+02 5.8 0.2 2 20 931 949 930 949 0.95 12 19 0.0032 1.1 12.4 0.2 2 23 968 989 967 989 0.97 13 19 0.0016 0.54 13.4 2.3 1 23 1013 1035 1013 1035 0.97 14 19 0.35 1.2e+02 6.0 5.1 3 21 1056 1074 1054 1078 0.89 15 19 0.015 5.1 10.3 0.8 2 23 1135 1157 1134 1157 0.94 16 19 0.02 7 9.9 2.9 3 23 1185 1206 1183 1206 0.89 17 19 0.02 6.6 9.9 0.2 1 23 1213 1237 1213 1237 0.93 18 19 0.0049 1.7 11.8 4.3 1 23 1242 1265 1242 1265 0.97 19 19 0.011 3.8 10.7 0.4 3 23 1297 1318 1295 1318 0.95
Sequence Information
- Coding Sequence
- ATGGAAAAAAGGCTGGATGATGTTGTTGAGATCAACAACTTGGAAAACGCTTGCCGGCTATGTCTCACCACTGAACAAACAAGGTCTTCAATATTTGGCGTACCTCATGTATCGATTCCCTTTGCTGAAAAGATTAAAGCTTATTTATCTATTCAGgTCACCTCAAACGATAAATTACCAACGCTGGTATGTACAACttgtattaaaaacataaatcatTGGCATACTTATAAAGATATTGTTCTACGATCGCAAGAGAAACTTCAACTATGGCTAGTAAAACAGAACGCAATTCAGCCACAGGTAAACATCAAAGAAGAACCAATAGATGTAGAATTTCGAGATGACAATCCTCAAATTCCAACAGTTGATTCCAATATGaCGAACCATGTAGAAAGTGCAGCAGACATGGAAGTTGATACGGAAACAACTGCCGTACCAGCTACAACTGAAGCAGCTGAACCATTACCAGAGCAGCCTCAAAAAGTTAATCAGGAAAAAATAGACAAAGAAAGAATAGAAAAAGATTATTCTCCGATGGTTCAAATTAAAACTGAACCCATAGATACAGAAGATGAAGATGATTGTAATATAGATGTTGAATCTGTAAATAGCggagaattattaattaatcctATGGCAATGGCTGCAGGAAATGCAGCTAATAAGGATAGAATAATGGAAGCTGATTCAACGCAAAAATTCAGCTCAAAAAAGTTTGGCCCAAGGAAAAAGAATCGTCGTGGACCTCATACGCACTTTAGGGgcgttaaattatttaagaaaaaatgcatgcattgtaaaataaatttgcaTTCAAAACATTCATATACACAGCATATGTCTAGGTACCATTGTATTGTTAATAGTTTAGGTACAAATGACTTTGTAAAAGTACCACCGCCACCTACAAGTAAACAAAAATCAAAACTCACTCATCATCCAGAAAATGCAGGGCCTGAATCAGAACCAGAAAATGAGACCAGTCCAGAAGAGTTGGAgtatgaaaaaatgataaagacTACACCCTTAACACATATGCAAAAGAGTATTATTGGTCAACTGAAAACTTTTTCATGTTTCTCTTGCAAACAAACTTTCTTTGATCGCAGACATACTTTGAATCATATCAGGACACATATGCCTGATTTAAGGCCTTATACTTGTATTGCTTGTCTTACTGAATTTTCAGATAGGTCTATGTACAAACTTCATTGTGGTGCATCTTTTGAATGTGCTATGAAAATTGCTCTCGTAGTTCCTAAAGGaggtaatgaaaaatattttacctgTAATATGTGTCTTAGATCTTTTAGCAATCGAAAAGAATTACTAAGTCACCTGGCTATGCATGCTGACAAACAACACAAGCAATTAGATCAACCTCCTTTAAGATCTCCACCAAAGCTTAAACCTATTGCTTCGACACCTAGAGCTGACTCTTCACCCACTAAACGAAATTTAGGAATTTCCATTGGTCCTTATGTGAATGGAGATCCAGCACACAATCATATGTGTGATTTGTGTGGAATGATTTATAGGTATAAACCTAATATGTTTAAGCATCGTGATCTCTGCTTAACTCTGCCAGAAAACATGCGTACATCTTTTAAATGTATTCATTGTAACATGACTTTTCTTGTATACAAAAAATTCTACGTACACATTTTCTATGATCATAAAAAACGAGAAATTACTTGCTATACATGCCAAGCGCGATTTGCTACTGCTGATGAATACCAGGTTCATCATGAAACACATAGAACTGTTGGTAAAGAAACTTCAAAAGAATTAGCGAATGATAAACATGTAATTGATCCACTGAATGATTCACAGCACCCAATGGATGTTAGCGAAAAGCCTTTCAATTGTGCACTCTGTGGTGAAGATTTTGCTACAAAACTTGAACTTTCTGAACATCGTAATCTTCATCTCAAAGTTAAGATTTACTCATGTGTAATTTGTCGAAGTATGTTCAGTAGTTCAGGAGCTTTAGAGGTACACATGAAAGAACATGGTATAGATGATGTTGGTGAACAAAATGCCAACAGTTCATGTATCGAATATGGTCGTGGTAGTCGCTCACAAGATTCGTTGAATACATCATCTTTATCTGCTGTATCAGATCCAGGAGGACGTATTAATTATTGCTATGAATGTAATAAGAATTTTTCTAATCAAGCTAATTTGAAGAGACATGAACGAAACCTACATACAAAACAAAAACGTCGTTGGAGTTGTGATGAATGTAAAAGACGTTTCAAATCAGCTGAAGATTTTGATCAACATGTAAGATTGGAGCATGGACCACACGCACAACAAAACGTTGAAAATAAGatgtCTCCACCTCAACTTTCTCCAAGTACAGGCAGACCTGTAATGCAGTGTCCCAAATGTCCTAAGACTTTTACTTATCaaggtaatttaattttacactgTCAAAATGTCCATAAAGAGAATCATTTTGAACGCATCATAAGTACGGCTCGTCGTTCAGCACCTGCTGCACCTCGTCCAGCTGGTGGCCTAGTCACTGCTCGTGGTCATACGTGTGATATTTGTGGAAAATCATTCCGTGAAGAACAATCGCTTAAAACTCATCGTGGTTGGCATTTGCGAACTAATTATCGACTTAAATCAGATGTTCAAAATACAAGTGTAGATGATAAAACTATAACTGCATCTGGATTTACTATGACACCAGTACCAACTACGCCAAAACCAGCAAAAGCACGAAAATCTTTCCCAAACAATCCTTCTCAAAAGCAGCTTGATACTATCACAACTTTACAATGCCAAGTTTGTGATGATCGCTTCCATGATGTAGCTGATTTAAGAAAACATCTGTGGGATGTACATTGCGCTCGAAACAAGCCTGAAAAAGCTTTTGTGAGTGAACTTCAGTGTGAACTTTGTACTAATAAATTTACAGACGAAATGGCTTTAGAGGAACACATGAAATGGCATTCACAAAATCCAATTCTTAGTAACAGTAATAGTAGCAATGCTATAACTCCTGTCActgaaaataaaacattttattgcgATATTTGTGGCAAGTATTATAGCAGCCAAAAGGTCTTCTTACGCCATAAAAAGTTACACAAAGTTCTGCCTGCTTCAAGTGTTATGAATCTTCAATCACTACAAAGTAAACGTCTCTTTTGTCATACTTGTCAAAAGCATTTGTCTTCCGAAGCATCACTTAGACGACACAAAGCTTCACCTTGTCACATAAATGCTGCACGTGCTCAGATGCAAGCACCACCGAAAAAAATTACGACAACAGCTATTGTACATCATCCCCCGCCAGACCCTTTGAAGatacaaacaattaaaaaagaaCCTGGTTTAGATTATAGCACAAGTCAATCAAGTTTACCATCAAAAAAGAAACCAGTTACTTGTCACATATGCAAGACAGTCTTCCCAAATATGAGTGTGTTATATCAACACAAACAACTTATACACAAATTACCTGGTGGTCCCAAAGATAGAGGTATGCATCAAACTGAATGCGTACCTCTTATGAGTGCTGAAGGTTTGGTATGTTGCAACTTATGTGGCAAACAATTTCCTGGAATTTCAAACTTGAAACAACATTTTGCTCATAAACACAAACTTAAAGCTGCATCTTTCCCTTGCTATTCACCGGGATGCAAACTTGTTTTCAGCAGTGTGAATTCTTTAAAATCTCATGAATCAACACACTCAAGTATGATTTATAATTGTCATTTATGTGATAGACATGTATTTTCAAGGTCTGCAATGACTAAACATATGTTAACTATGCATAAAGCAATCTATTCATCAGGAGCAAATAAAAGTTCTCTATGGTCTGAGACAGATTTGAATACTTACAGCGTGAAGAATGCTCAAGGAACAGCGTGTccaaaatgtaaaattaagtatCCTAATTTAAGGGCTCTCAAGATTCATTATTTGAAAttccatgaaaaaaaagaatactga
- Protein Sequence
- MEKRLDDVVEINNLENACRLCLTTEQTRSSIFGVPHVSIPFAEKIKAYLSIQVTSNDKLPTLVCTTCIKNINHWHTYKDIVLRSQEKLQLWLVKQNAIQPQVNIKEEPIDVEFRDDNPQIPTVDSNMTNHVESAADMEVDTETTAVPATTEAAEPLPEQPQKVNQEKIDKERIEKDYSPMVQIKTEPIDTEDEDDCNIDVESVNSGELLINPMAMAAGNAANKDRIMEADSTQKFSSKKFGPRKKNRRGPHTHFRGVKLFKKKCMHCKINLHSKHSYTQHMSRYHCIVNSLGTNDFVKVPPPPTSKQKSKLTHHPENAGPESEPENETSPEELEYEKMIKTTPLTHMQKSIIGQLKTFSCFSCKQTFFDRRHTLNHIRTHMPDLRPYTCIACLTEFSDRSMYKLHCGASFECAMKIALVVPKGGNEKYFTCNMCLRSFSNRKELLSHLAMHADKQHKQLDQPPLRSPPKLKPIASTPRADSSPTKRNLGISIGPYVNGDPAHNHMCDLCGMIYRYKPNMFKHRDLCLTLPENMRTSFKCIHCNMTFLVYKKFYVHIFYDHKKREITCYTCQARFATADEYQVHHETHRTVGKETSKELANDKHVIDPLNDSQHPMDVSEKPFNCALCGEDFATKLELSEHRNLHLKVKIYSCVICRSMFSSSGALEVHMKEHGIDDVGEQNANSSCIEYGRGSRSQDSLNTSSLSAVSDPGGRINYCYECNKNFSNQANLKRHERNLHTKQKRRWSCDECKRRFKSAEDFDQHVRLEHGPHAQQNVENKMSPPQLSPSTGRPVMQCPKCPKTFTYQGNLILHCQNVHKENHFERIISTARRSAPAAPRPAGGLVTARGHTCDICGKSFREEQSLKTHRGWHLRTNYRLKSDVQNTSVDDKTITASGFTMTPVPTTPKPAKARKSFPNNPSQKQLDTITTLQCQVCDDRFHDVADLRKHLWDVHCARNKPEKAFVSELQCELCTNKFTDEMALEEHMKWHSQNPILSNSNSSNAITPVTENKTFYCDICGKYYSSQKVFLRHKKLHKVLPASSVMNLQSLQSKRLFCHTCQKHLSSEASLRRHKASPCHINAARAQMQAPPKKITTTAIVHHPPPDPLKIQTIKKEPGLDYSTSQSSLPSKKKPVTCHICKTVFPNMSVLYQHKQLIHKLPGGPKDRGMHQTECVPLMSAEGLVCCNLCGKQFPGISNLKQHFAHKHKLKAASFPCYSPGCKLVFSSVNSLKSHESTHSSMIYNCHLCDRHVFSRSAMTKHMLTMHKAIYSSGANKSSLWSETDLNTYSVKNAQGTACPKCKIKYPNLRALKIHYLKFHEKKEY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -