Adis031014.1
Basic Information
- Insect
- Anastatus disparis
- Gene Symbol
- -
- Assembly
- GCA_017163975.1
- Location
- JAFFSR010000218.1:4038296-4044807[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.096 33 7.8 0.3 2 23 398 420 397 420 0.94 2 12 0.012 4 10.6 5.2 1 23 427 450 427 450 0.96 3 12 5.4e-06 0.0018 21.1 0.7 1 23 456 479 456 479 0.96 4 12 8e-08 2.7e-05 26.9 3.1 1 23 485 507 485 507 0.99 5 12 1.9e-05 0.0065 19.4 2.1 1 23 517 540 517 540 0.97 6 12 4.2e-05 0.014 18.3 1.7 2 23 547 568 546 568 0.96 7 12 0.0021 0.72 13.0 0.4 1 22 575 596 575 596 0.95 8 12 0.0091 3.1 11.0 2.9 1 23 756 779 756 779 0.95 9 12 0.072 24 8.2 0.4 1 23 786 809 786 809 0.91 10 12 5.7e-07 0.00019 24.2 1.0 1 23 817 839 817 839 0.99 11 12 2.1e-07 7e-05 25.6 1.7 1 23 845 867 845 867 0.95 12 12 0.0014 0.48 13.5 0.6 1 21 873 893 873 894 0.91
Sequence Information
- Coding Sequence
- ATGCCAGATGAAACAGAAATGGAAACTTTATTATCCAACTATATCCTAAATGATGTCCTAAATGAGGAACTACATAATGAAGAAGATCACATCGATATGGAgagtattaaaatttcagatttttcttcGTTATTAGATTCTTTAAGTGAACTTAACAATAATGAGCACATATTAAATGTAAATCCTAGCAATAATATTGAAAGTTCAAAAAATGAATCGAGTTGTAACAGTGCTGAATTTATATGTCAACAAGTAACATCGAAGGAAGACGTTCAACTGAAGGAATTTGCAACTCCAAATGTAACAGATCAATcagttttaattaataatgaaaatcacGACAATTATACATTGAATGTCACTCTTGGTTTCACGAATTCACGTAATCCGACTATCAATATCGATGAGCTTTACAATTCTATCGATAATTGGCTTGAAGGTACCAATGAACCGATTCAAAAAAATAGCGAGTCTGCTGGTGATGGTATATCCCCAGTTACTTTAGATACATTGGACATTACGTTGGAACCTGGTCATACCAATGAATATCATCTTTTGGATAATACTATCGGTCAAAAGAATGATTTTGGTAATATAAACAGTGAATTAACAAACATTGAAATTTTGGATCATAATTGTGTGAATACACAATTAccaattaatgattttataTTGTATGAAGATGTTGAAATGAACGACCATACGTCAGCAATCAGAACAAATCAAGCAGCTGTTAATGATTTGGAAAATCACAGCAGTGTCATAACGAATATTGATTTATCCGCAATTCCATCTAGTCCAATCagtatacataaatattataattctatAGATGATTGGCTGCAAACTGATAGTGAATCCAATTCAAAAAGTAATGAGTGCTCTGATAATACAACTCCGATTTCTTCggattcattaaatattttgtttgaagTTAACATTACTAACATGGAAAACAGTGCCTCTCAAAATAATGATTCTGTTGATATGACAAACAGGAACAACGAATTAAAAAGCATTGAAAATTTTAGCAATGAAGTTTCACAACAAAATCCTCTTAGTTCTATAACAAGAAATGAAGAAATCCAAACTAATGTTAATCCCAGGACCACAAAAACCAAATCTAATAAGGAAAATAATAGCGGGCCTAAATTTATTCGCATCATTGGGAAAGATACAACATTACTGGTTCAGTGTTATTATTGTAAAGACGAATTCGATAAAGCTAATGAATTAAAGGCTCATCTTCtcaataaacataaaaatgaacGATACATACACGTTTGCAAAAGCTGTGGAAAAAGTTACACAAGTGTTTGTCAAGTAAATCGTCATCGTCGAGAGAAACATTTTTCAAATCTGAAATACATTTGCCAACACTGTGGTGAAAGATTTGAACGTAAAGAGAATTTAGTGAAACACGAAAATGTAGTAcatttgaaattaaagaaattcaaatgTGAACATTGTAATAAAACTTTTGCCACTAAATCTAATTTGCTAGAACACATACAAACTCATTTGGAAAACGACAAATCAGAACGTGAATTTGAATGTCAAATTTGTAAATTGAAGTTCAGACGTAGAGATAAATTGCGAAGACACGAAAATACAGTACATTCTGATGCTCGAAATTGGGAGTGTACGATTTGTAATAAGACATTCAAGAGAAAAGATAAATACTCAGAGCACGTGAAAAATCATTCTAAACcgaaaattgtttataattgcgAATATTGTAATCAAATCTATAAAAGACCACAAGGTCTTGCTACTcataaaaaaACTAATGCATCAACAGAAACCAATACTAATGAGggttttttaagcaattttgtGATTCCTACCGCATCTCAATCAACAAAACTCGCAACAAAATCCATAAGAACCTGCTACCAAAACGGAAAGATTTCACATTTAATTACAGATAATGAAAGAGAAACTTCACAACTTCCAGATGCTAATACAAgacaGCTTGAAGATATAAGTTCAAACACAATAAACATATCTACTACAGCTGATAGTCCATTAACTAATGTTACTCCAACGAACGATCACATCAGCAATGGAGCAGAAACAACTGATCAAGTGGCAAAACAAATTATTccaaatcaaataattttaccgtCAACATCAACAGACGCAAGTCGAGCAGAAGCTTACACGAACCACCAATCAAagacaaaagaatttaatagtAATACATTCCAAATACAGAAACATTTTAAGCCCTACCCGGTGATACAGTATGATGATGAGATTAGATTTTGTTGCTCTTACTGCAATAAAGAATTCGGCGAAGTTAAGGATTTTGAAAAACATCTTCGCGATCAACATCTCGAAGAACGTTACACATTCGTCTGTGAATCTTGCGGCAAgggttacataaaaaaaaactttttagatgaACATCGCGAAGCATTTCATCAATCGAAGAATAATGAAGAATACACATGCGAAATATGCGATAGTAAATTTACTCGTAAATCTAATTTAGTAATGCACATAAGATCGCATTCGAGATCTCAGACTCACCAATGTCCATATTGCGGCAAAATATTTTCTCGTAAAGATAATTTAACTCAGCACGAATATATTCATACTAACAGAAAAGCATTTCTTTGCGAAAAATGTGgcaaaagttttataaatttgccatattttaatgttcataaaaagaaatgtaataATCTCATTACTAAAGTTTATGGCCAAATCGCCGAAAACCAAAAACCAGAAAACCTTTATGCCGATAATCCAGAATACAGAAAACTAAAATACCGAAAGACCAAGATCCCGAAAACCATGGTAACGAAAATCAAGATATCGAAAACCATAACCCAGAAAACTAAATTGCCGAAAACCAAAAAACCGAAAACTTATTTCCCGAAAGGTCAAAATCCCGAAAACCATTTTCCCGAAACGCCAAGATCCGAATACCATTATTACAAAAAGGCTAAAATCCGAAAACCATTTTTACGAAGAAGCTAA
- Protein Sequence
- MPDETEMETLLSNYILNDVLNEELHNEEDHIDMESIKISDFSSLLDSLSELNNNEHILNVNPSNNIESSKNESSCNSAEFICQQVTSKEDVQLKEFATPNVTDQSVLINNENHDNYTLNVTLGFTNSRNPTINIDELYNSIDNWLEGTNEPIQKNSESAGDGISPVTLDTLDITLEPGHTNEYHLLDNTIGQKNDFGNINSELTNIEILDHNCVNTQLPINDFILYEDVEMNDHTSAIRTNQAAVNDLENHSSVITNIDLSAIPSSPISIHKYYNSIDDWLQTDSESNSKSNECSDNTTPISSDSLNILFEVNITNMENSASQNNDSVDMTNRNNELKSIENFSNEVSQQNPLSSITRNEEIQTNVNPRTTKTKSNKENNSGPKFIRIIGKDTTLLVQCYYCKDEFDKANELKAHLLNKHKNERYIHVCKSCGKSYTSVCQVNRHRREKHFSNLKYICQHCGERFERKENLVKHENVVHLKLKKFKCEHCNKTFATKSNLLEHIQTHLENDKSEREFECQICKLKFRRRDKLRRHENTVHSDARNWECTICNKTFKRKDKYSEHVKNHSKPKIVYNCEYCNQIYKRPQGLATHKKTNASTETNTNEGFLSNFVIPTASQSTKLATKSIRTCYQNGKISHLITDNERETSQLPDANTRQLEDISSNTINISTTADSPLTNVTPTNDHISNGAETTDQVAKQIIPNQIILPSTSTDASRAEAYTNHQSKTKEFNSNTFQIQKHFKPYPVIQYDDEIRFCCSYCNKEFGEVKDFEKHLRDQHLEERYTFVCESCGKGYIKKNFLDEHREAFHQSKNNEEYTCEICDSKFTRKSNLVMHIRSHSRSQTHQCPYCGKIFSRKDNLTQHEYIHTNRKAFLCEKCGKSFINLPYFNVHKKKCNNLITKVYGQIAENQKPENLYADNPEYRKLKYRKTKIPKTMVTKIKISKTITQKTKLPKTKKPKTYFPKGQNPENHFPETPRSEYHYYKKAKIRKPFLRRS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -