Adis079508.1
Basic Information
- Insect
- Anastatus disparis
- Gene Symbol
- -
- Assembly
- GCA_017163975.1
- Location
- JAFFSR010000335.1:2678289-2681707[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.03 10 9.4 0.6 1 23 336 358 336 358 0.93 2 12 0.0066 2.3 11.4 1.1 1 19 360 378 360 380 0.94 3 12 6.9e-07 0.00023 23.9 2.2 3 23 423 443 422 443 0.98 4 12 1.5e-05 0.0051 19.7 0.4 1 23 449 471 449 471 0.98 5 12 0.00014 0.048 16.7 1.6 1 23 477 499 477 499 0.98 6 12 1.3e-05 0.0046 19.9 1.7 1 23 505 527 505 527 0.98 7 12 0.00018 0.062 16.3 1.5 1 23 533 555 533 555 0.98 8 12 2.6e-06 0.0009 22.1 0.6 1 23 563 585 563 585 0.98 9 12 0.0039 1.3 12.1 0.1 1 23 591 613 591 613 0.94 10 12 0.00023 0.079 16.0 3.3 1 23 619 641 619 641 0.97 11 12 3.1e-05 0.01 18.8 0.6 1 23 647 669 647 669 0.98 12 12 9.5e-06 0.0032 20.4 0.5 1 23 675 697 675 697 0.98
Sequence Information
- Coding Sequence
- atggCAGCCATTGaagaatttgattatttatgtCGATTATGTGGCATTAAAACAGATGTTCTTATGGGATTGCCTATCTTTGAAACTGGTGAACAAATGAGAAACATGGATAAAAAAATTACTGCTTGTTTACCGCTTGagattTCAATGTCAGATCAATTACCAAAAGTAATATGTGAAGATTGTGCTTTCAAAGTagatgaaatttttaactttcgAGAAAAAGTTTTGCAAACTGAAATCATGTTAATTCAAATGCTACAAAATAGTTCAAAACAACTCACAGATTCTATGAGTGGGGTCAatgataaaattcaaaaaaatgtagatggacttacaaatgatattgataGCATACAAAATTCTAATGTTGCAAGACATGATGTACAGAATGATATTAATACAATATCTGAGATAGACAATATGAGTCTTTCGGATCCAGAACAAGATGCAACAGATCAAATAATTTATGGAGAGGAGACTGATACTAAAATGGATGCTTTTTGTTTAGATGGAAGTTCAGTAAGAATGATGGATAAACAAATGATAGAGaTCAAACGCCAAGAAATACCAATGCATCTGGAAAGAGACACTTCTGTAACTGTGGAGAATCTGACAGTTGATGGCCATTCAAGTcaattaaatatcaattatgTAACTTCAGTGGTTCCTGAATCACAGATGGATAGACAAATTATCTATTGTAAAAATCcaataaaatttgaagcaaTCACGTCTGATGATCTGCAGGATGGATTAAATCAGACACCAGTTGTTATGAAACAACACAATTATGCCTCTTGTAAAACGGAAAATAGTTCTAATGATTCACTTGATCAAGTAACGAATATCTCTATACACTCATATGCATTACCATCTACAAGTCAGACTGGCACATCTGAAAATACAGAAGGAATTATGGTAGAGTATACAAAAGgtgcaaaaaatttattgttagaaGATGTATTAAATAGTCCTACGATTGATGAAGCTAAAACTAATTGGTATGCATGTACATTTTGTGGAGAAGCTTTTCCAGAACGAAAACATATTATTTCACATTTTGagcaacatttttttaattgtcaaaATTGCGATTTATGTTTCACTAATATCGAAAGTTTGAACATTCATAGTCAAGACTGTTCCAAAGAGGAAAACAATAAAGAGCAAAACACTGAAAAACACAACGATTCATCTAATAGTGTTCAAATCGATAAATCTGAAACAAACCAAGGTAATCGACCTAAATGGACACCAAAAATTTGCCCTCACTGTGGCAAAGAATATCGAACAAACTATAAGCTTCAGgAACATATGCGTAAGCATACCGGTGAGAAACCGTTCCAGTGCGAAGTATGCCAAAAATCATTTCGAAGTAAAATCGGCCTAGCTCAACATACGGCTATGCACACGGGAGAATTTGACTATAGCTGTCCGACATGTGGTAAAGGCTTTCAATGCAAGAGTTATCTGGTTGTTCATCAACGTGTTCATTCGAATCTTAAACCTTACCCTTGTACAAAGTGCGATCAAACTTTTAAAACTAAACAGTCACTTATGGATCATGAAAATCGACATATGGGTGTAAAACCTTACAAATGCGAAATTTGTGGTCGAGGCTTTATTACCAAAGGTCTCTGTACGAGTCATCAAAAAATACATTCGGGTATAGATAATAGACAATATCCTTGTGAAGTGTGCAACAAGTTGTTTGTAAGCAAAAATTATCTTAATACACATATGAGGATTCATACCGGAGAAAAGCCGTATCTGTGTGAGGTTTGCGGTAAAGGTTTCCTGACACAAGTTGATCTTAAAGTTCATTCAACAATGCATactggtgaaaaaaattttaattgtgattTGTGTAACAAAGTGTTTGCAAGACGTTCCGCATTACGCTGTCATAGACGTTCACATACTGGAGAACGGCCTTATCGATGTGATGTTTGTGGTAAAACTTTTACTCAATTCAGTCCTATGGCAATACATAAACGACTGCATACGGGTGAACGTCCATACGAATGCGATGTTTGTGGCAAAGGATTTGTATCAAGATCCACAATGGTTAGTCatagaaaaaaacataaaacGAACGAAAGTACTGATACagataaaaaaacaacaaaggAAAAGGATGAAGTTTTTAAGCGGATTAAACTTGTATACAACAATGCAAGTACAGATGCATTCATCTTgccttaa
- Protein Sequence
- MAAIEEFDYLCRLCGIKTDVLMGLPIFETGEQMRNMDKKITACLPLEISMSDQLPKVICEDCAFKVDEIFNFREKVLQTEIMLIQMLQNSSKQLTDSMSGVNDKIQKNVDGLTNDIDSIQNSNVARHDVQNDINTISEIDNMSLSDPEQDATDQIIYGEETDTKMDAFCLDGSSVRMMDKQMIEIKRQEIPMHLERDTSVTVENLTVDGHSSQLNINYVTSVVPESQMDRQIIYCKNPIKFEAITSDDLQDGLNQTPVVMKQHNYASCKTENSSNDSLDQVTNISIHSYALPSTSQTGTSENTEGIMVEYTKGAKNLLLEDVLNSPTIDEAKTNWYACTFCGEAFPERKHIISHFEQHFFNCQNCDLCFTNIESLNIHSQDCSKEENNKEQNTEKHNDSSNSVQIDKSETNQGNRPKWTPKICPHCGKEYRTNYKLQEHMRKHTGEKPFQCEVCQKSFRSKIGLAQHTAMHTGEFDYSCPTCGKGFQCKSYLVVHQRVHSNLKPYPCTKCDQTFKTKQSLMDHENRHMGVKPYKCEICGRGFITKGLCTSHQKIHSGIDNRQYPCEVCNKLFVSKNYLNTHMRIHTGEKPYLCEVCGKGFLTQVDLKVHSTMHTGEKNFNCDLCNKVFARRSALRCHRRSHTGERPYRCDVCGKTFTQFSPMAIHKRLHTGERPYECDVCGKGFVSRSTMVSHRKKHKTNESTDTDKKTTKEKDEVFKRIKLVYNNASTDAFILP*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -