Adis078253.1
Basic Information
- Insect
- Anastatus disparis
- Gene Symbol
- -
- Assembly
- GCA_017163975.1
- Location
- JAFFSR010000333.1:4157266-4167396[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0048 1.6 11.9 2.7 1 21 11 31 11 32 0.95 2 20 2.8e-05 0.0095 18.9 0.5 1 23 40 63 40 63 0.97 3 20 0.025 8.5 9.6 1.2 1 21 112 132 112 133 0.93 4 20 0.002 0.68 13.0 0.4 1 23 141 164 141 164 0.98 5 20 0.0051 1.7 11.8 1.2 1 21 196 216 196 217 0.95 6 20 0.00052 0.18 14.9 1.3 1 23 225 248 225 248 0.98 7 20 0.039 13 9.0 2.1 1 21 277 297 277 298 0.93 8 20 0.018 6.2 10.0 2.1 1 23 306 329 306 329 0.98 9 20 0.017 5.7 10.2 5.8 1 21 371 391 371 392 0.96 10 20 1.9e-06 0.00065 22.6 2.1 1 23 400 422 400 423 0.96 11 20 0.031 11 9.3 0.9 1 21 455 475 455 476 0.92 12 20 3.8e-05 0.013 18.5 0.8 1 23 484 507 484 507 0.98 13 20 0.081 28 8.0 2.1 1 21 544 564 544 565 0.92 14 20 0.00045 0.15 15.1 0.9 1 23 573 596 573 596 0.98 15 20 0.00052 0.18 14.9 3.1 1 21 633 653 633 654 0.96 16 20 0.00018 0.063 16.3 1.0 1 23 662 685 662 685 0.98 17 20 0.0015 0.52 13.4 2.2 1 21 730 750 730 751 0.95 18 20 0.0079 2.7 11.2 1.3 1 23 759 781 759 782 0.96 19 20 0.0024 0.83 12.8 4.0 1 21 819 839 819 840 0.93 20 20 0.0043 1.5 12.0 0.3 1 23 848 871 848 871 0.98
Sequence Information
- Coding Sequence
- ATGTTCCATCCGCATAAAACTAATAAAGCGTACGAGTGTCTTAAATGCCATCGAAGCTTCAGTCATAAAACAACCATTGTAGATCATTTACGTTACTTTTGCGGAATGGGACCACGTTACAAGTGTCCTTATTGCGATGCTACTTTCACCTCTATATCAAGTGTATATCGACATGTAAGACAAATTCATCCTGGTTTAGAAGTTCGACATGTCAAACTCTTTCATAAAATGCGTCATACATGGACAGTtcataaatattacCATAAAAATCAAGAATTACAAGATTTAACGGAATTCGAGTATGGGTTTCATCCAGAAGCGACTAGTAAAGCCTATGAATGTCTCAAATGTCGTCGACGTTTCACACAGAAGAGAACCGTAATTGAGCATTCACGTTATTTATGTGGTAAAGGTCCGCGATTTAAATGTCCGTACTGTGATTACTTGGGTATTAATTCATCTAACGCATTAAGACATACTCGAAAAGTTCATCGAGATAAGAAAGTTTATGATCAAGAAAATGACGAATTGGAAATTTTAATGGAATCAGGTTTCGTATTGCATCCAAGAATGGTAAATAAAGCCTATGAATGTCTAAAATGTCATCGACGTTTTACACAGAGGGTAACAATAATTGAtcatttaagatatttttgtgGCATGGGTCCACGATATAAATGTCCGTACTGTGATTATTTGGCTACTAATTCATCAAACGTATTCAAACATGCCAGAAAAAAGCATCGAGATAAAGAAGCTCACTactATCATGGAAATCAAGAAATAGACGTTGGTTACTTAATACATCCAGAAAAGCAAATTAAAGCATTCGAGTGTATAAAATGCCATCGTTGCTTCAGTCAAAAAGCTACGGTAGTTGATCATATACGTTACTTTTGTGGCATGGGTCCACGTTATAAATGTCACTACTGCGAATATCTTGGTGTTAATTCATCAACTGTATTGCGACACACAAGACGTATTCATATAGGTCAAGAAGTTCGTTGCATCAAGTTGTTTACGAAGATACGCGTGAGTCAAGAACATAGAGAAACGCAAGATTCAGTAACTTTCGCTTATAAGATACATCCAAACACGCGTAATAAAGCTTACGAATGTCTCAAATGTCATCGACGTTTCACTCAAAAATGCACGATGCGAGATCATTTGCGTTACTTCTGTGGAATGGGTCCACAATACAAATGTCCTTATTGTCCTTACGCAACCACGAATTCATCAAACGTATTTCGGCATATAAGAAGTCATCATATAGGTCTAATTAAACCATCATTAGTGGTACGAAAAGATCTTCAAATTATCGATGAATCAGCTTACAAAGAACACCCGACCATTGTAAAGCGTTACGAGTGCATAAGATGTCAACGTCGTTTTACGCAAAAGGGAACAATGATGAATCACTTACGTTACTTTTGCGGTAGAGGACCGCAATATCAATGTCCTTACTGTTCTAACTTGTTTGTTAATTCGTCAAATGTATTTAAGCATATTCGAAGAGTTCATCGAAATAAAAAACCTCACTGTCCAATTAAACCATCATTAGTGGTACGGCAAGATCTTCAAATTATAGATGAATTCGCTTACAAAGAGCACCCGACCAGTGTAAAGCGTTACGAGTGCATAAGATGTCATCGTCGTTTTACGCAAAAGACAACAATGATGGATCATTTGCGTTACTTTTGCGGCAAAGGACCGCAATTCAAATGTCCTTATTGTTCTAACTTGTTTGTTAGCTCATCAAACGTATTTAAGCATGCTCGAAGAGTTCATCGAAATAAAAAGCCTCACTGTTTAATTAAACCAACACTAGTGGTAAGAAGAGATCTTCAAAATTCCAATCAACCGTCTTACAAAGTACATCCGACCAATAAAAAACGTTACGAGTGCACAAAATGTCATCGTCGTTTTACCCAAAAGACAACAATGATGGATCATTTGCGTTACTTTTGCGGCAGAGGACCGCAATATAAATGTCCTTACTGTTCTTACGGTTCTATTAATTCATCAAATGTATTCCGTCATGTTAGAAGCTATCACCCAGGTCTAGAAGTTCGTTGCACTAAACTTTTTACGAAGATGCGTTTAGTTAAACCAACGCTAGTGGTAAGAAGGGATCTCCAGAGTTTCATTCAACCAGCTTACAAAGTACATCCGACCAATGTAAAACGTTACGAGTGTACAAAATGCCATCGTCGTTTCACGCAAAAGACAACAATAGTGGATCATTTGCGTTACTTCTGCGGCAAAGGACGACGTTTCAAGTGCCCGTATTGCGATACACTTGCTGGCAGTTCATCGAACGTTTATCAACACGTTAGGCGCCATCACAAAGATAAAGAACCTAAAGCTATAAAACTTTTTTCGAAAATGAAAGACTTGGAAAAAGCAGTTTACGAATATTATCAAGAAAACCAAAGAATCGAATCTAGTCAACGACACGCTTGTCCTGAGTGTTATCGAACATATAAGCATCGTAGTCATATGATTCGTCATTACAAATACGAATGCGGTGGTGATCCACGTTTTCAGTGTCCTTATTGTTGGTTGTTGATAAGACAACGCACGCAAGTTTGGAGGCACATTCGTCGATTGCATCCTAATCATGAATTTTATTGCGTTGACATTGTTACCAATGAAAAACTAGTCAGATGCAATTAG
- Protein Sequence
- MFHPHKTNKAYECLKCHRSFSHKTTIVDHLRYFCGMGPRYKCPYCDATFTSISSVYRHVRQIHPGLEVRHVKLFHKMRHTWTVHKYYHKNQELQDLTEFEYGFHPEATSKAYECLKCRRRFTQKRTVIEHSRYLCGKGPRFKCPYCDYLGINSSNALRHTRKVHRDKKVYDQENDELEILMESGFVLHPRMVNKAYECLKCHRRFTQRVTIIDHLRYFCGMGPRYKCPYCDYLATNSSNVFKHARKKHRDKEAHYYHGNQEIDVGYLIHPEKQIKAFECIKCHRCFSQKATVVDHIRYFCGMGPRYKCHYCEYLGVNSSTVLRHTRRIHIGQEVRCIKLFTKIRVSQEHRETQDSVTFAYKIHPNTRNKAYECLKCHRRFTQKCTMRDHLRYFCGMGPQYKCPYCPYATTNSSNVFRHIRSHHIGLIKPSLVVRKDLQIIDESAYKEHPTIVKRYECIRCQRRFTQKGTMMNHLRYFCGRGPQYQCPYCSNLFVNSSNVFKHIRRVHRNKKPHCPIKPSLVVRQDLQIIDEFAYKEHPTSVKRYECIRCHRRFTQKTTMMDHLRYFCGKGPQFKCPYCSNLFVSSSNVFKHARRVHRNKKPHCLIKPTLVVRRDLQNSNQPSYKVHPTNKKRYECTKCHRRFTQKTTMMDHLRYFCGRGPQYKCPYCSYGSINSSNVFRHVRSYHPGLEVRCTKLFTKMRLVKPTLVVRRDLQSFIQPAYKVHPTNVKRYECTKCHRRFTQKTTIVDHLRYFCGKGRRFKCPYCDTLAGSSSNVYQHVRRHHKDKEPKAIKLFSKMKDLEKAVYEYYQENQRIESSQRHACPECYRTYKHRSHMIRHYKYECGGDPRFQCPYCWLLIRQRTQVWRHIRRLHPNHEFYCVDIVTNEKLVRCN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -