Adis001135.1
Basic Information
- Insect
- Anastatus disparis
- Gene Symbol
- -
- Assembly
- GCA_017163975.1
- Location
- JAFFSR010000004.1:4001035-4005331[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.2 3.9e+02 4.4 6.6 3 19 42 58 41 69 0.86 2 18 0.00042 0.14 15.2 2.4 2 23 76 98 75 98 0.90 3 18 1.7e-05 0.0056 19.6 3.6 2 23 105 127 104 127 0.97 4 18 9.6e-05 0.033 17.2 1.4 2 23 134 156 133 156 0.95 5 18 0.00018 0.061 16.3 0.6 2 21 163 182 162 183 0.94 6 18 0.011 3.7 10.7 6.3 3 23 261 282 259 282 0.89 7 18 0.00026 0.087 15.8 1.1 1 23 287 310 287 310 0.92 8 18 4.2e-05 0.014 18.3 4.3 2 23 317 339 316 339 0.97 9 18 1.2e-06 0.00039 23.2 0.5 2 23 346 368 345 368 0.95 10 18 4.8e-06 0.0016 21.3 1.0 2 23 375 397 374 397 0.96 11 18 9.4e-05 0.032 17.2 2.7 2 23 404 426 403 426 0.95 12 18 8.7e-05 0.029 17.3 2.9 1 23 432 455 432 455 0.97 13 18 0.00018 0.06 16.4 0.7 2 23 462 484 461 484 0.96 14 18 0.0064 2.2 11.5 4.8 2 23 491 513 490 513 0.96 15 18 0.00017 0.058 16.4 2.0 1 23 519 542 519 542 0.97 16 18 0.00018 0.061 16.3 3.1 2 23 549 571 548 571 0.96 17 18 0.0035 1.2 12.3 3.8 2 23 578 600 577 600 0.96 18 18 0.00016 0.054 16.5 2.9 1 23 606 629 606 629 0.96
Sequence Information
- Coding Sequence
- ATGTTGATCACACCTGATCTAGAAACCAgtttaatttctattaaagaTGAAAGCTACGGTAAATTAGCAGACTTCGAAAATCAGACTCTTAATGATCATTCAACTGGATCTCAAAAAAATCATTGTGATGTTTGTGGCAAAGATTTTTCATCTCAACAAAAGTTGAAATGCCATTCAAACTTACAACGTCACGAACGGTTatcacatttaaatattcgAGATTGGAAATGCAGAAAATGCGACAAATGTTTCGGTTCTAAGCAGACTTTAGAACGTCACGAAGGATCAGTTCATTTGAAAATCCGAGGTTGGAAATGCACCAAGTGTGACAAATTTTTAAGTACTCAATATAACTTAAAACATCACGAACGaacaatacatttaaatatgcAACAGTGGAAGTGCATGAAATGTGACAAATCTTTTACTTCTAAACTCAGTTTAAAACTTCACGAACAAAGAATACATTTGAATATTCGAGATCAACAGTGCACAATGTGCGACAAAGCTTTTAAAACTGATCAAGATTTAAAAGTGCACAAACGATCCAGTGTAAAAAGCTCAATAGGAATAAATTTACATCGATTCTTGACACCAATTGTTAAACAAGAAGAAACAATGGATATCAAAAGTGAAATGTATGACATAGTAGATTCAACGTCTATAACATCTGATTTTGAAACCAgtttaatttctattaaagaGGAAAGCTATGGTGAATTGgcagattttaaaaatgatagtTTTAATGAAGTTGCAATTGAACCTAAGAATATTAATTGCAATATTTGTGGCAAAGATTTTTCGTCTCATCAAAAGTTAAAACACCATTGTAGGCAGGTACACGGgactaaaaagtatatttgTCATCTATGTAACAAAGGATTTGTTGTGAGGTACCTTTTGAAAAAGCATGAAAGCTTAGTACACTTAAAAATCCAAGATTGGCAGTGTACTCATTGTGACAAATATTTTGATACTAAACTATACTTAAAACGCCACAAACGAACAGAACATTTAAAAATCCGAGATTGGATATGCACGGAGTGTGACAAATCTTTTAGTACTAAACAGGCATTACAACGTCATGAGCAAAGAATACATTTAAATATGCAAAATTGGAAATGTATGGTGTGCGATACATCTTTTAATACTAAATTCAACTTAAAACGTCACGAAAGAATAGTACATTTAAAAAGTCGAGATTGCAAATGCACCAAGTGCGATAAAGTGTTAAGTACTAAACAGGAATTAGAACGTCATGAGCAAAGAATACATTTAAATGCTCGAGCTTTTAAATGCACGAAATgcgaaaaatcttttaatactAAACCAGAATTGCATCTGCACGAGCAAAGAATACATTTGAATATTCGAGATAAACAATGCGCAACATGCGtcaaatcatttacaactaACTGGGAGTTAAAACTTCACGAGCGACGAGTACATTTAAAAATCCGAGATTGGAAGTGCATGAAATGTGACAAATCTTTATGTACTAAACAGGCTTTAGAACACCACAAACAAAGAGTACACTCCAATAACCGAGATCATCAGTGCACAATGTGCGAAAAATCTTTCAATATAGACTATGATTTAAAACGTCACGAACGAATGGTACATTTAAAAAGACGAGATTGGAAATGCACCAAGTGCAACAAATGTTTAAGTAGTCAACAGAGTTTAAAAGTGCACGAACGGTCAGTACATTTAAAAATCCAAGATTGGAAGTGCATGAAATGTGACAAATCTTTATGTACTAAACAGACTTTAGAACAGCACAAACAAAGAGTACACTTCAATAACCGAGATCATCAGTGCACAATGTgcgaaaaatcttttaaaatgaaCTTAGATTTAAAACGTCACGAACAAAGAGTACATTTGAAGATCTGA
- Protein Sequence
- MLITPDLETSLISIKDESYGKLADFENQTLNDHSTGSQKNHCDVCGKDFSSQQKLKCHSNLQRHERLSHLNIRDWKCRKCDKCFGSKQTLERHEGSVHLKIRGWKCTKCDKFLSTQYNLKHHERTIHLNMQQWKCMKCDKSFTSKLSLKLHEQRIHLNIRDQQCTMCDKAFKTDQDLKVHKRSSVKSSIGINLHRFLTPIVKQEETMDIKSEMYDIVDSTSITSDFETSLISIKEESYGELADFKNDSFNEVAIEPKNINCNICGKDFSSHQKLKHHCRQVHGTKKYICHLCNKGFVVRYLLKKHESLVHLKIQDWQCTHCDKYFDTKLYLKRHKRTEHLKIRDWICTECDKSFSTKQALQRHEQRIHLNMQNWKCMVCDTSFNTKFNLKRHERIVHLKSRDCKCTKCDKVLSTKQELERHEQRIHLNARAFKCTKCEKSFNTKPELHLHEQRIHLNIRDKQCATCVKSFTTNWELKLHERRVHLKIRDWKCMKCDKSLCTKQALEHHKQRVHSNNRDHQCTMCEKSFNIDYDLKRHERMVHLKRRDWKCTKCNKCLSSQQSLKVHERSVHLKIQDWKCMKCDKSLCTKQTLEQHKQRVHFNNRDHQCTMCEKSFKMNLDLKRHEQRVHLKI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -