Adis054183.1
Basic Information
- Insect
- Anastatus disparis
- Gene Symbol
- -
- Assembly
- GCA_017163975.1
- Location
- JAFFSR010000268.1:1616500-1622996[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1.3 4.4e+02 4.2 1.8 5 23 169 188 168 188 0.94 2 21 9.4e-06 0.0032 20.4 0.7 2 23 195 223 194 223 0.83 3 21 1.2e-06 0.0004 23.2 1.9 1 23 228 250 228 250 0.98 4 21 2.1e-06 0.0007 22.4 4.5 1 23 256 278 256 278 0.97 5 21 2.9e-05 0.01 18.8 2.9 1 23 284 306 284 306 0.98 6 21 1.9e-06 0.00065 22.6 3.9 1 23 312 334 312 334 0.97 7 21 6.8 2.3e+03 1.9 0.1 5 23 404 423 403 423 0.94 8 21 0.0021 0.71 13.0 2.7 3 23 431 458 429 458 0.81 9 21 1.2e-06 0.0004 23.2 1.9 1 23 463 485 463 485 0.98 10 21 1.5e-06 0.0005 22.9 5.1 1 23 491 513 491 513 0.97 11 21 0.00011 0.038 17.0 3.3 1 23 519 541 519 541 0.98 12 21 1.9e-06 0.00065 22.6 3.9 1 23 547 569 547 569 0.97 13 21 6.8 2.3e+03 1.9 0.1 5 23 639 658 638 658 0.94 14 21 0.0021 0.71 13.0 2.7 3 23 666 693 664 693 0.81 15 21 1.7 5.9e+02 3.8 1.2 6 23 865 883 863 883 0.95 16 21 0.0036 1.2 12.3 2.1 2 23 890 918 889 918 0.82 17 21 5.5e-06 0.0019 21.1 1.4 1 23 923 945 923 945 0.98 18 21 1.8e-05 0.0063 19.4 2.0 1 23 950 972 950 972 0.96 19 21 2.4e-05 0.0082 19.1 1.2 1 23 978 1000 978 1000 0.97 20 21 2e-06 0.00068 22.5 3.1 1 23 1005 1027 1005 1027 0.97 21 21 4.6e-06 0.0016 21.3 2.2 1 23 1033 1055 1033 1055 0.97
Sequence Information
- Coding Sequence
- ATGGATTCATCAATGACCGATAACAATCAGGCacTAGCAGGCGTTCAGTCTCAATGCACATTGACAATCGAAAGCGTTCCAATAATTTCTGACGAAGCAACGTGTCATGAAACACAGAACGATAATCAACCTGCGTATTTACCAATCTCGACGACATCATCGAACCAACTGCAGACGTTTGAATCACATCAAGCTTTATCGTATACATCAGACCCAGCGGTATGCATCGCAACAGCATCGTATTGTCCAGCAACAAGTTATGCATTGCCACCGTCACCGCCGGAATCAACTAGTCCTCCATCTGATACAGAGGCATCATGCAGTACACAATGTACACCATCAACATCAACGCAAATTTCTCATCAACCTATCTCACAACCTGAATCAGATCATGTTGAGGACAAAATGAATAAGCAAAGTCATAAAAGCACTTTTGATGGttgtaaaaataagaaaaatctagTCGTTCCAAATAGTGAACATCAACACACGTTTCACTTTGAGGGCTGTGGTCAGCTTTTATGCACAAAAACACACTTTACAGACCATTTAAAGTCATCGCATATTGGAAAAAGACCTTATACGTGtgattttcttaataattcaaataCAATTTGTGGAAAAACATTTCCACAGAAGAAAATGTTAAAACGACATGTTAGAATACATGGAGAAAAAATACATGTATGTTCCATATGCTCTAAAGGATTTACGACGAGTGCATATCTCAAAAGCCATATTAGGACACATATTGGAGAAAAAAAGCATATATGTTCTATATGTACTAAAGGATTTAATAGGAAAGACCACCTCAATAATCATATTAGGACACATACTGGAGAAAAAAAGCATACATGTTCTATATGTTCTAACGGATTTACGACGAGTGTATATCTTAAAAAACATATTAGGACACATACTGGAGAAAAAAAGCACATATGTTCTATATGTACTAAAGGATTTAGACGGAAAGACCACCTCAATAATCATATTAGGATACATCGGAATCTGGATACGGAGGCATCATGCAGTTCACAATGTACACCATCGACATCAACGCAGATATTTCATCAACCTATCTCACAACCTGAATTAGATCATGTTGAAGACAAAATGAATAAGCAAAGTCATAATAGCATTTTTGATGGTtgtaaaaatgagaaaaatctAGTTCCAAATGGTGAACGTCAACACACATTTCACTTTGAGGGCTGTGGTAAGCTTTTACCTACAAAAACACGCCTTGATGACCATTTAAAATCATCGCACACTGGCGAAAGATCTTACACATGTGATTTTGGTAATGATTATAATACAGTTTGCGGGAAAACGTTTCACAAGAAGCACGCGTTAAAACAGCATGTTGAAACACATGGAGAAAAAATACATGTATGTTCCATATGCTCTAAAGGATTTACGACGAGTGCATATCTCAAAAGCCATATTAGGACACATATTGGAGAAAAAAAGCATATATGTTCTATATGTACTAAAGAATTTAGGAGGAAAGACCACCTCAATAATCATATTAGGACACATACTGGAGAAAAAAAGCATACATGTTTTATATGTTCTAACGGATTTACGACGAGTGTATATCTTAAAAAACATATTAGGACACATACTGGAGAAAAAAAGCACATATGTTCTATATGTACTAAAGGATTTAGACGGAAAGACCACCTCAATAATCATATTAGGATACATCGGAATCTGGATACGGAGGCATCATGCAGTTCACAATGTACACCATCGACATCAACGCAGATATTTCATCAACCTATCTCACAACCTGAATTAGATCATGTTGAAGACAAAATGAATAAGCAAAGTCATAATAGCATTTTTGATGGTtgtaaaaatgagaaaaatctAGTTCCAAATGGTGAACGTCAACACACATTTCACTTTGAGGGCTGTGGTAAGCTTTTACCTACAAAAACACGCCTTGATGACCATTTAAAATCATCGCACACTGGCGAAAGATCTTACACATGTGATTTTGGTAATGATTATAATACAGTTTGCGGGAAAACGTTTCACAAGAAGCACGCGTTAAAACAGCATGTTGAAACACATGGAGAAAAAATACATAGATATATATTACACGTGACTCCAGTAGCAGGCGTTGAGTCTCAATACACATTGACAATCGAAAGCGTTCCAATAATTCATGACGAAGCAACGTATCATGAATCACAGAATGATAATCAACCGGCGTATTTACCAATCTCGGCGACATTATCGAACCAACTGCAGACGTTTGAATCACATCAAGCTTTATCGTATACATCAGAGCCAGCGGTATGCATCGCAACAACATCGTATTGTCCAGCAACAAGTTTTGCATTGCCACCGTCACCGCCGGAATCAACTAGTATCCCATCTGATACAGAGGCCTCATGCAGTACACAATGTACACCATCGACATCAACGCAGATATCTCATCAACTTATCTCACAACGTGAATCAGATCATGTTGAGGACAAAATGAATAAGCAAAGTCGTAAGTGCACTTTTGATAGTtgtaaaaatgagaaaaatctAGTCGTTCCAAATGGTGAACGTCAACACACGTTTGACTTTGAGAGCTGTGGTAAGCTTTTATGCACAAAAACACGACTTAAAGACCATTTAAAATCATCGCATACTGGCAAAAGACCTTACACGTGTGATTTTGGTAATGATTATAATACAATTTGCGGGAAAACTTTTCACAAGGAGCACGCGTTAAAACAGCATGTTGAAACACATGGAGAAAAAATACATGTATGTTCCATATGTTCTAAAGCATTTGCGATGAGTGAATACCTTAAACGACATATTAAAACTCATGGAGAAAAAATGCATATATGTTCCATATGTTCTAAAGGATTTACGACGAGTCGCTACCTCCAAAAACATATTGGGACACATACTAAAGAAAAAATGCATATATGTTCCATATGTTCTAAAGCATTTGCGATGAGTGAATACCTTAAACAACATATTAAAACCCATGGAGAAAAAATGCATATATGTTCCATATGTTCTAAAGGATTTACGACGAGTCGCTACCTCCAAAAACATATTAGGACACATACTGGAAACAAAAGGCAtatatgttttatatgtacTAGAGAATTTAGGAGGAAAGGCAACCTCAATAATCATATTAGGATACATCGGAATCTGGaaggaaaaaatttaagtataaaaactACTAACAATTAA
- Protein Sequence
- MDSSMTDNNQALAGVQSQCTLTIESVPIISDEATCHETQNDNQPAYLPISTTSSNQLQTFESHQALSYTSDPAVCIATASYCPATSYALPPSPPESTSPPSDTEASCSTQCTPSTSTQISHQPISQPESDHVEDKMNKQSHKSTFDGCKNKKNLVVPNSEHQHTFHFEGCGQLLCTKTHFTDHLKSSHIGKRPYTCDFLNNSNTICGKTFPQKKMLKRHVRIHGEKIHVCSICSKGFTTSAYLKSHIRTHIGEKKHICSICTKGFNRKDHLNNHIRTHTGEKKHTCSICSNGFTTSVYLKKHIRTHTGEKKHICSICTKGFRRKDHLNNHIRIHRNLDTEASCSSQCTPSTSTQIFHQPISQPELDHVEDKMNKQSHNSIFDGCKNEKNLVPNGERQHTFHFEGCGKLLPTKTRLDDHLKSSHTGERSYTCDFGNDYNTVCGKTFHKKHALKQHVETHGEKIHVCSICSKGFTTSAYLKSHIRTHIGEKKHICSICTKEFRRKDHLNNHIRTHTGEKKHTCFICSNGFTTSVYLKKHIRTHTGEKKHICSICTKGFRRKDHLNNHIRIHRNLDTEASCSSQCTPSTSTQIFHQPISQPELDHVEDKMNKQSHNSIFDGCKNEKNLVPNGERQHTFHFEGCGKLLPTKTRLDDHLKSSHTGERSYTCDFGNDYNTVCGKTFHKKHALKQHVETHGEKIHRYILHVTPVAGVESQYTLTIESVPIIHDEATYHESQNDNQPAYLPISATLSNQLQTFESHQALSYTSEPAVCIATTSYCPATSFALPPSPPESTSIPSDTEASCSTQCTPSTSTQISHQLISQRESDHVEDKMNKQSRKCTFDSCKNEKNLVVPNGERQHTFDFESCGKLLCTKTRLKDHLKSSHTGKRPYTCDFGNDYNTICGKTFHKEHALKQHVETHGEKIHVCSICSKAFAMSEYLKRHIKTHGEKMHICSICSKGFTTSRYLQKHIGTHTKEKMHICSICSKAFAMSEYLKQHIKTHGEKMHICSICSKGFTTSRYLQKHIRTHTGNKRHICFICTREFRRKGNLNNHIRIHRNLEGKNLSIKTTNN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -