Adis096575.1
Basic Information
- Insect
- Anastatus disparis
- Gene Symbol
- -
- Assembly
- GCA_017163975.1
- Location
- JAFFSR010000381.1:5209112-5215023[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.018 6.1 10.0 1.2 1 19 61 79 61 83 0.93 2 21 0.00063 0.21 14.6 3.9 3 23 87 108 85 108 0.92 3 21 2.6e-05 0.0088 19.0 0.7 1 23 143 166 143 166 0.96 4 21 0.00042 0.14 15.2 0.5 2 23 173 195 173 195 0.93 5 21 0.0014 0.49 13.5 0.6 1 23 200 222 200 222 0.96 6 21 8.9e-08 3e-05 26.7 0.3 2 23 229 250 229 250 0.97 7 21 0.00011 0.039 17.0 4.0 1 23 256 278 256 278 0.98 8 21 5e-07 0.00017 24.4 0.4 1 23 284 306 284 306 0.98 9 21 0.017 5.7 10.1 1.5 1 23 348 371 348 371 0.93 10 21 0.00095 0.32 14.1 0.0 1 23 377 400 377 400 0.96 11 21 2.6e-05 0.0088 19.0 0.4 1 23 405 427 405 427 0.99 12 21 0.0066 2.2 11.4 0.8 1 23 433 455 433 455 0.97 13 21 3.3e-06 0.0011 21.8 1.3 1 23 461 484 461 484 0.97 14 21 1.4e-06 0.00047 23.0 0.2 2 23 495 517 494 517 0.96 15 21 0.0027 0.92 12.6 0.3 1 23 528 550 528 550 0.96 16 21 6e-07 0.0002 24.1 0.1 2 23 557 578 557 578 0.98 17 21 8.4e-06 0.0029 20.5 0.5 1 23 584 606 584 606 0.96 18 21 3.5e-06 0.0012 21.7 1.3 1 23 612 635 612 635 0.98 19 21 0.013 4.3 10.5 0.6 1 23 681 704 681 704 0.97 20 21 6e-06 0.002 21.0 2.2 1 23 710 733 710 733 0.98 21 21 0.0097 3.3 10.9 0.3 2 23 740 762 739 762 0.96
Sequence Information
- Coding Sequence
- ATGCAAAGATCAAGGCGTGCAAATGTAAAAAGTCGATTCGCTCAAACGCAAAGTTCAGAAAACCCAACAAGATTATCCAAACGTCGTAGAAATGTTAATGTACCgctgaaaaaatttaaactcgAGGATAATGAAGATTCAATAGAAATAGACATTGAAGCAATTAAAGATGAGATTGTTTACTTTTGCGATAAATGTAATGTCACCTTTAACAGTTTACAAGAATTGAAAGAGCACGATAAAGATCATAAAATTTGTTGTGACCATTGTGAATTATCATTCAGAAATAGAAAACTATTGCGCAAGCATATATCGGAGGATCACAAGACAATACCAAAATTCGTATGCAGCGAATGTCATTCGATATTTAAATGCCGTCAATCATTGCGCGAACATTTTGTTCGCAAGCATACCGAAGATTACAGATTCGTCTGTGGAACGTGtggtaaaaaatttaagatgaaAAGTGATTTGTATATGCATGTACAAAGTATACATAGCGATGAACGTGGAGCTGTTTGTGATGTGTGCGGTAAAACGTATAGGAATGGATTTGCTTTGAAGAAACATTTAGCGCACGCACATAATCAGCGACAATTTGCTTGTGATATATGTAAACGTAAATTAGCGACTAAAGAATCGCTTGAACATCATGCAATGTTACACCTTAGAAAAGAGCGTGCAGTTTGTCAAATTTGCGGCAAAACATTTAGCGGTAATGATGCTTTGAAAAAACACATGAGGATACATACTGGCGATAGGCCGTTTCCGTGTAAAATTTGTGGCAAAACATTTAGAAGACAAAATACGCATAAACAGCATTTGTTAACGCACACTGGACAACGGCCATACGTATGCGATGTTTGCGGCAAGAGTTTTACGCAAAAGCCAGGTTTAATCACACACAGAAAAAAGCATCCAGGACCCCTGCCGCCATTAGCTCCAGTTTCTATTGATTATGTTCTTGGGGATTTGATGCAACTTGACAAAGTAGAAAAAGTCATCAATCCggtaATACGTTTACCAGCTGGGAAAATAGAGCACTACTGTCCACTGTGTCTTGTGGGCTTCAAACGCGTATCTTTACTAGCTAAACATCTGTGCGATGATCATGGGATTGAAAAACCATTTGAATGTGAAATTTGTGGTGCTGCTTATAGTGATCCTAAAATGGTTGTACGCCATGCTCGTCTTCGTCATGGTGAAAAAAAGTTTACTTGTGATTTATGCGGTTACGCTACACAACAAAAATCAAATCTCGATGTACACATACGCAGACATGccaaaaattattcttatatatgTGATGTTTGCAACAAAGGCTACATGCAGCGTTCAAAATACTTGGAGCACAAAAATTTACACATACACGGCGCAGCACACGAGTGCCAAATATGCGAGAGAGtatttaattacaaaagaaaTCTCATTGCACACATTAAAACTTCTCATCCAGAAAGTTTCAATGAATTAACAACTGTCGAATGTAGTGTTTGTCCGCGTACATTTGCTAATGAATATTCGCTTAGAAGACACATGAAATCGGCTCACTCAAATTTATcggaaagtgaaaaaaaaaattatttgtgcgATTTGTGCGGTGTTAAATTGTCATCGGCAACATCGTTAACACAGCACAAAAGACTTCACACAGGTGAAAAAGTTGCCGAATGTGATGTTTGCGGTAAAGGTTTTGCCAAAGCTGAAAATCTTAAGGTACATCAAAGAACGCATACGGGTGAAAAGCCGTATTTATGCTCGATTTGCGGCAAAGATTTTACGCAAAGAACGTCGTTAATTTATCATTTGAGAGGGCACTCTGGCGAAAGAAATTACGAATGCGAATATTGTGGCAAGGATTATGTATCGCATACTGGTTTGAGGAAACATATTAGAAAAGTTCATGAGACTATTTTGGAAGAAATTGGATTATTTTCCTGTTACAGTAGTTGGGATGATACTTTTGTGGCGTTGGACAATACTGActataataaaatcaaagatGAAATCATCGAATCATTCGTTAATAGTCAATATAATCATCGTTGCGAGAAATGCGGCGAGGGTTTCATGTACGGCAATCGTCTGTTAAATCATCTGCGGATTGTTCACAATATATTACGTCCATTCAAATGTAATTTCTGCGACAAAAATTATACCCAACGCTTCATGCTCAACGCACATATTAGAAAAATACATGGACCTGGACAAGTTGTTGAATGCGCTCATTGTGGTTATTCGACTCTTGATCGTGCCAAGCTTGAAAGACATATTATGCGATGGCATGATAATCAATTACCCATTACTAATAATAAAGGACAAGAGTCATCGGATAAGctAGTACTCCAGTCGATAGATGGTCAAAATCAACCTTCTGTATGTAGATAa
- Protein Sequence
- MQRSRRANVKSRFAQTQSSENPTRLSKRRRNVNVPLKKFKLEDNEDSIEIDIEAIKDEIVYFCDKCNVTFNSLQELKEHDKDHKICCDHCELSFRNRKLLRKHISEDHKTIPKFVCSECHSIFKCRQSLREHFVRKHTEDYRFVCGTCGKKFKMKSDLYMHVQSIHSDERGAVCDVCGKTYRNGFALKKHLAHAHNQRQFACDICKRKLATKESLEHHAMLHLRKERAVCQICGKTFSGNDALKKHMRIHTGDRPFPCKICGKTFRRQNTHKQHLLTHTGQRPYVCDVCGKSFTQKPGLITHRKKHPGPLPPLAPVSIDYVLGDLMQLDKVEKVINPVIRLPAGKIEHYCPLCLVGFKRVSLLAKHLCDDHGIEKPFECEICGAAYSDPKMVVRHARLRHGEKKFTCDLCGYATQQKSNLDVHIRRHAKNYSYICDVCNKGYMQRSKYLEHKNLHIHGAAHECQICERVFNYKRNLIAHIKTSHPESFNELTTVECSVCPRTFANEYSLRRHMKSAHSNLSESEKKNYLCDLCGVKLSSATSLTQHKRLHTGEKVAECDVCGKGFAKAENLKVHQRTHTGEKPYLCSICGKDFTQRTSLIYHLRGHSGERNYECEYCGKDYVSHTGLRKHIRKVHETILEEIGLFSCYSSWDDTFVALDNTDYNKIKDEIIESFVNSQYNHRCEKCGEGFMYGNRLLNHLRIVHNILRPFKCNFCDKNYTQRFMLNAHIRKIHGPGQVVECAHCGYSTLDRAKLERHIMRWHDNQLPITNNKGQESSDKLVLQSIDGQNQPSVCR*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00080535;
- 90% Identity
- iTF_00080535;
- 80% Identity
- iTF_00080535;