Basic Information

Gene Symbol
Cdc5l
Assembly
GCA_017163975.1
Location
JAFFSR010000335.1:2188008-2192114[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3e-16 7.4e-13 51.0 1.5 2 46 9 54 8 54 0.97
2 3 4.7e-12 2.7e-08 36.4 0.1 1 45 60 103 60 104 0.93
3 3 4.9 2.8e+04 -2.1 0.0 33 46 577 590 574 590 0.85

Sequence Information

Coding Sequence
atgcCGCGAATTATGATAAAAGGTGGTGTCTGGCGAAACACCGAAGATGAAATTCTCAAGGCAGCTGTGATGAAATATGGTAAAAACCAATGGAGTCGTATTGCTTCGTTGCTTCACAGAAAATCAGCAAAACAGTGTAAAGCTAGATGGTTTGAATGGTTAGATCCAAGTATCAAAAAAACAGAATGGAGTCGTGAAGAAGATGAAAAACTTTTGCATCTAGCTAAATTAATGCCTACACAATGGAGAACAATAGCTCCAATCATTGGCAGAACAGCGGCGCAATGTTTGGAAAGATACGAATATCTACTTGACCAAGCtcagaaaaaagaagaaggagatGACAGTGTTGATGATCCTCGAAAATTGAAACCAGGAGAAATTGATCCCAATCCTGAAACAAAACCAGCTCGGCCAGATCCTAAGGATATGGACGAAGATgaaCTTGAAATGTTATCTGAAGCTAGAGCAAGATTAGCAAACACACAAGGTAAAAAAGCTAAAAGAAAAGCTCGTGAAAAACAGTTGGAAGAAGCTCGAAGACTTGCAGCTTTACAAAAACGTAGAGAGTTGAGAGCGGCTGGTATTTCAGtacaacaaaaaaacaaaaggaaACGTGGGATTGACTATAATAAAGAAATACCTTTTGCAAAAGCACCTGCACCAGGATTTTATGATACATCAACTGAGGAAGTTGATAATGTTTTGTTACTGAGCAAATCCAATGTTAATCAATTAAGCTTCCAAGAGAAAGAAGagcttgaaagaaaaaaagacaaacaaaaacttaaacaaagaaaagaaaacgatATACCAATCAACATGTTAAATCAAGAACCAGTCAAAAAACGTAGCAAATTAGTTTTACCAGAACCACAAATATCTGATAGAGAATTGCAGCAAGTAGTTAAATTGGGTAGAGCTTCTGAGACTGCTCGAGAAATCGTCTTGGAAGGTGGAAACCATTCATCTGATAGTTTATTAGCAGATTATTCTTTAACTCCTAATACAGCAGTGACTCCTAGGACACCAGCTGCTGTTGACCGGGTTTTACAAGAAGCCCAAAATGTTATGGCATTAACACATGTTGATACACCTTTAAAagGTGGACTGAATACCCCTTTAAATAATGCTGACTTCAATTCAATTCAGCCAACATCAAATGTCGTTGCTACGCCTAATACTGTGTTAGCTACACCAGCAAGAACACCAAAAGGTGATATGACACCAGGTTTCAGTACACCTGGTTCTGTCAAGCAAAGTGCAACAGCAGCACAAACACCTATCcgtgataaattaaatattaatcctGAAGAAGCATTGGAAGCTTCTCAGACACCTATCGTACAAAAACAGGTTAAAGATCATTTACGAGCTAGTTTTAGCTCTTTACCAGCACCTAAAAACGATTATGAAATTGTAGTACCAGAAGAACCCATTAATGATGAGGAGTTAAATACTCAAGAAGAGCAGCAAGTAGAAGATCAGGCTGAAGTTGATGCCAGAAGACAACAAGAGTTAATAGAGCAACAAAAAAGGGAACTAGCAAAAAGATCTCAAGTTATTCAAAGGGCTTTACCACGACCTAATGAAGTGAATATGAATATTCTAAGACCTACAACTGAAGTATCATTAACTGATTTACAGAGGGCTGAAGAATTAATTAAACAAGAAATGATATGCATGTTGCATTATGACGCGGTAAAAACTCCCATTCAACCTAGTAGTAAACGCTTAAATTCAATTGTAAATCAAGCACAAAATTATTTAGATCATCATCCTTATGATGAATTTCAAAAGGATGAATTGGAGGCtgccaaaaaattaataacaaatgaaATGGCTGTTGTCAAAGAAGGTATGGGTCACGGAGATTTAAGTTTAGAAGCTTATTCTACAGTTTGGGAAGAATGTTTATCACAGATTTTATATTTGGAACCACAAAAAAGGTATACCAGAGCTACTTTAGCTGCTAAGAAAGATAGGATTGAAGCATCTGAAAGGAAGCTGGAAGAAAATCGAATGCATATGACTGGTGAGGCAAAACGTGCTGCTAAAATGgagaagaaattaaaggttCTACTTGGTGGTTATCagaaTCGTGCACAAGCTCTCATCAAGCAGTATAATGATACAAATGATCAAACTGAACAACTTAGATTAGAACTATCAACATTTAGATTTTTGCAAGCGCAAGAAGAAGTAGCATTGCCTAAAAGAATGGCTGCACTGGAAGAAGATGTTATCCGTCAAAAAGAAAGAGAGCGTGCACTACAAAAGCGTTATGCAGATTTGCAAGAAAAGTTGCATGAATTACAAATTCAACCTTTTTAG
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGDDSVDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGISVQQKNKRKRGIDYNKEIPFAKAPAPGFYDTSTEEVDNVLLLSKSNVNQLSFQEKEELERKKDKQKLKQRKENDIPINMLNQEPVKKRSKLVLPEPQISDRELQQVVKLGRASETAREIVLEGGNHSSDSLLADYSLTPNTAVTPRTPAAVDRVLQEAQNVMALTHVDTPLKGGLNTPLNNADFNSIQPTSNVVATPNTVLATPARTPKGDMTPGFSTPGSVKQSATAAQTPIRDKLNINPEEALEASQTPIVQKQVKDHLRASFSSLPAPKNDYEIVVPEEPINDEELNTQEEQQVEDQAEVDARRQQELIEQQKRELAKRSQVIQRALPRPNEVNMNILRPTTEVSLTDLQRAEELIKQEMICMLHYDAVKTPIQPSSKRLNSIVNQAQNYLDHHPYDEFQKDELEAAKKLITNEMAVVKEGMGHGDLSLEAYSTVWEECLSQILYLEPQKRYTRATLAAKKDRIEASERKLEENRMHMTGEAKRAAKMEKKLKVLLGGYQNRAQALIKQYNDTNDQTEQLRLELSTFRFLQAQEEVALPKRMAALEEDVIRQKERERALQKRYADLQEKLHELQIQPF*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309433;
90% Identity
-
80% Identity
-