Adis077948.1
Basic Information
- Insect
- Anastatus disparis
- Gene Symbol
- -
- Assembly
- GCA_017163975.1
- Location
- JAFFSR010000332.1:5163799-5165718[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-08 3.6e-05 25.9 0.0 4 35 19 50 16 58 0.91 2 2 5.3 6.7e+03 -0.5 0.0 4 15 93 104 90 106 0.83
Sequence Information
- Coding Sequence
- ATGCCAAAATTAAAAGAgaaaaaaacagCACAAAGAAAAACATATAATGATTCCGATATGGAAAAAGCTGTAAATGAGGTTAGGAGAGGACTTAAAGTAAGACAAGCtagcaaaaattataatgtgCCTTATGCTACATTATATACAAAAAGTAAAGGATATTTACCTTTGAAAACTCGACCTGGACCAAAAAGTGTCTTTTCTGAGGAGGAAGAAAAAGAACTTGTAAATTGGATTTTGCATTTGGGTGATTGTGGATTTCCAATTACTAGAGTACAGTTATTGGAAGCTATTCAGAGTATTgtgaaaaaatctaaaagagACACTCCATTTAATAATGGTCGCCCATCAAAAAAATggtacaaattatttttaaataggcATCCAAATTTAAGTGAAAGAGTATCTCAAAACTTAACAAAAGCAAGAGCGAACATTACTGAAGAAACCATAAGAGGTTGGTTTGCTGAAGTGAAATCATATCTTGAATCTAAAGACTTATTGAAAATAACTCCAGACAGAGTGTTTAATTTAGACGAGTCTGCTTTTTGCTTGAGTCCCAAAAGTGGCAAAGTTTTAGTACGTAGAGGTGAAAAAGCTGTTTACACTGTTGTTGGAAGTGATAAAGAATATTATACAGCATTAATTGGAGGCAATGCAGCTGGAGTTTTAATACCAACAAtggtattatttaataatgaaaggATTTCTTCTTTGGTCGCAGATCATTTTCCAAAAGAATTTGTTATAGGAAAAAGCGAAACAGGATGGATGACCACTGAAGTTTTCTTCGGATATATAGTTAACAGCTTTTATCCATGGTgtataaaaaaccaaattgaatttccaattattatatttgttgatGGACATAGTTCACATTTGAATATGGAATTAAGCAACTTTTGTGTCGAACACCAAATAGAATTAATAAGTTTATTTCCTAATGCTACACATATTTTACAGCCCATGGATGTGGCTCTCTTTCGTGCACTAAAGCTTGCATATAATGAAGCTGTTCGCTCATGGAGAATGGAGAATGATGATGATATTACTGAACAAGAGATTCAgactgtaaataaaattttaagcgaACAACCTGTTAATGCACTTGAAGTATTTCAAGTGATTACTGAAAATAGGTCTTCCATAGACAAGTTTGCTAATTCACATTTGAATGATAATCATACGGATAACAGTATCATTGTACCAAGTAATGATATGCATACTTCGAGTCACCTTCGTATCATTGATGCATCAGATAATTGTTTTTCTTCGACAGCTGCTGATGATTTAATATTTGCAGATGACAGtggttttgtagatgtagtccAAATGCAAATAGACAATAAggaaattaataatacaattttagatACTGTTAGTAAAAGTATAAATATCACTAATGTTAAAGATGAATTGAAGActgataaaataatagattCCAATAATTCTGagAAGATAAAAAAAGGTCttcaaaaatgttaa
- Protein Sequence
- MPKLKEKKTAQRKTYNDSDMEKAVNEVRRGLKVRQASKNYNVPYATLYTKSKGYLPLKTRPGPKSVFSEEEEKELVNWILHLGDCGFPITRVQLLEAIQSIVKKSKRDTPFNNGRPSKKWYKLFLNRHPNLSERVSQNLTKARANITEETIRGWFAEVKSYLESKDLLKITPDRVFNLDESAFCLSPKSGKVLVRRGEKAVYTVVGSDKEYYTALIGGNAAGVLIPTMVLFNNERISSLVADHFPKEFVIGKSETGWMTTEVFFGYIVNSFYPWCIKNQIEFPIIIFVDGHSSHLNMELSNFCVEHQIELISLFPNATHILQPMDVALFRALKLAYNEAVRSWRMENDDDITEQEIQTVNKILSEQPVNALEVFQVITENRSSIDKFANSHLNDNHTDNSIIVPSNDMHTSSHLRIIDASDNCFSSTAADDLIFADDSGFVDVVQMQIDNKEINNTILDTVSKSINITNVKDELKTDKIIDSNNSEKIKKGLQKC*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00079809;
- 90% Identity
- iTF_00079809;
- 80% Identity
- -