Adis038630.1
Basic Information
- Insect
- Anastatus disparis
- Gene Symbol
- lov
- Assembly
- GCA_017163975.1
- Location
- JAFFSR010000229.1:4937160-4939477[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00059 0.74 12.2 0.0 1 38 206 242 206 248 0.87 2 4 1.6e-12 2e-09 39.6 0.0 1 39 256 294 256 298 0.88 3 4 0.00011 0.14 14.5 0.0 7 34 314 340 311 346 0.84 4 4 2.7e-10 3.4e-07 32.4 0.0 4 37 371 404 370 410 0.93
Sequence Information
- Coding Sequence
- ATGTCTGAATCGGCAACAAAAACAACAACACAAAGTGTCAGTGATGCTGATACATCGTATTGTTTCAAATGGAGCAATTATCAGGGCCATTTGTCCGAAGTCGTGAGACAACTTCTTGACGAAGAATGTATGGTAGACGTAACGCTTTATGCCGGTGGAGAACGGATACAAGCCCACCGGCTTGTATTGTGTGCTTGCAGTACATTATTTCAAgaCATTCTCAGTCAGGTGAATGATGAACATCCAACTATTATTTTAAGTGACATATCAGCACAGGACGTTAGATCCATCGTTGAATTTAGTTACAATGGAGAAGTTAGAATACccgttgaaaatattaataatttgttagATGCAGCGCATTCTTTGAAAATATGTGGTTTGATGGAAATTGAAGGTCTTGATGAATCTGAAATAGCAAATGACAAAGATGCAAATATCGAAGAtgcttatattttaaatgaattgacTCAAGAAGACGACGATGatttagatttttttgaaaaaaatgatgatgaaaaagttgatgaaaaaaatagaaaaacttcaACAAGTGATTCAGATgttactaaaaagaaaaaatatcaaagaaagAGCGTTTGTAAGAAAGATTACACTGATGAAATGTTAGAAGCTgctattattgatataaaagcTGGGAAATCATTACTTGAAGCTTCAACTAAAAATCATATTCCTAGATCAACATTATACATGCGTGCTAAGGTATTAGGAATCCCTTTAAATCCATGCAGAAGTGAATACACAAATGATGATATGAGAGGTGCTATACAAGCTGTTATGGaggGCTCAAGTTTACAACAAGCATCAGATTGCTATGGGATCCCAAAAACAGTGTTATGGAGGAGGATTCATAAAGAAGGATATCGTACACCTAAACGTGATCAAAGAAAAAGTTATCCATCCGAGAAAAGAGAAGCTGCTGTTCGTGCATTAGAAAAAGGAGAATCTCTTACAAAAGTCGCAAAtgaatataatatTCCAAAAACAACACTGTTCCGAGATAAAGTTCGTTTAGTTGATGAAGGTAGATTGCCAGAATCTATGTGGAAAAGACGTAAAACTGAGACTGAAGATCGTAAATTATCTAGACTAGAAGAAGCTGTAGCTGCCTGTAAAGATGGTAAAATGTCTCAAGCTGCTGCTGCTTTTACTTATCAAATACCTAAAACAACTATATGGCGACGGCTGCATAAAGAAGATAAGAAATCAGATTCATTcacaaaaaagcaaaaaaatttgcTTAAGAAACCTGAATTTGTGAATAGAGGATCCATAGAAGTTGTTAAAGCAGAAGAACTAAACGAAGCTGATTTTGAATCTTATTGTCCAGATGAAACAGAAATGAACATAACATATATTGACGAAAGTAACATGTCTGATGACCCAGTGATAATTCTAGCAAGTGGAGATGTTGATGATCTTAATTTGTCAAACAGATCTTTGGTTGTGGTACAAAGTGATggtAATACtgatgaaaatttcatttcctGTGGCTTAGAACTAGATGAAAATTCAGAATTTGTTGAGAAAAGTTAA
- Protein Sequence
- MSESATKTTTQSVSDADTSYCFKWSNYQGHLSEVVRQLLDEECMVDVTLYAGGERIQAHRLVLCACSTLFQDILSQVNDEHPTIILSDISAQDVRSIVEFSYNGEVRIPVENINNLLDAAHSLKICGLMEIEGLDESEIANDKDANIEDAYILNELTQEDDDDLDFFEKNDDEKVDEKNRKTSTSDSDVTKKKKYQRKSVCKKDYTDEMLEAAIIDIKAGKSLLEASTKNHIPRSTLYMRAKVLGIPLNPCRSEYTNDDMRGAIQAVMEGSSLQQASDCYGIPKTVLWRRIHKEGYRTPKRDQRKSYPSEKREAAVRALEKGESLTKVANEYNIPKTTLFRDKVRLVDEGRLPESMWKRRKTETEDRKLSRLEEAVAACKDGKMSQAAAAFTYQIPKTTIWRRLHKEDKKSDSFTKKQKNLLKKPEFVNRGSIEVVKAEELNEADFESYCPDETEMNITYIDESNMSDDPVIILASGDVDDLNLSNRSLVVVQSDGNTDENFISCGLELDENSEFVEKS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00080393;
- 90% Identity
- iTF_00080393;
- 80% Identity
- iTF_00080393;