Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_017163975.1
Location
JAFFSR010000333.1:10071803-10096581[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.8e-17 6.1e-14 54.0 0.1 1 45 469 514 469 514 0.97
2 2 1.3e-17 1.6e-14 55.9 0.0 1 43 955 998 955 1000 0.94

Sequence Information

Coding Sequence
ATGGGCCGTAGGAGATGGAAGCAGTACCAGGATACCCTGTACAGCGGTACTCGCAGCAGCACCGACAACAATACGACTACGCCGACAAACCAGCATCAACAGCAGCTTCAGCTACAACTGCAGCAGCTGGCTCAGgtGCAGCAGGCAAAGCCGGCAGATTCACCGAGCCAGCAGCTAAAGGCGAGTCTAGCAAATCATCATCAACAGCAGCGAGTTGCGGCAAATTGTACAACGGTTGTCGTTACTGGTGGAGAATCGCCACGTCGTGCCGACGAGTCAGCAGCTACAGGGGTTACGGAAAACGGTCGTATATTGTTATTAACAACAACCGAAGGTGCCCGAGAAAACGGCACCATAAATACAAACGAGAACGGGCCATTACGTGGCCATTGCGAAAACGACAGAACGACACTGGAcgaagaagaggaagaagatTCATCATTAGCTGCAAAGACAACAATAACTACGACGACAGCGAAGACAATAGTGAAAAACGAATTAACGAACGAAGAAGAAATCGCACAGAGGATAAAAAGAGAACGACTCGACGAGAGGATAAGGCTGAGTCCGTTAAGGGAGGACGAAAAAACGATAGAACGGCCAAACAAGACCAACGACACGGAAGGGACCAAGGAAGTAAAAGAGGAAATAGGATCAGAACCGCGGGTCCAAATAACACAGGGCTTGCTAAGggtaaagaaagaagaagaattaCAAGAGACACCGGGTCCTGGCGGTGGATTAAATTGTCCAAGGCCAACATCAACACCAttaaacaacaacaacaacaacaacaacggACCGACAGTTGGAGAAATACGTAGTGCATCAACACCACCAAAGAAAGAGGTTGTATTTTGTGTACCATCTTACGTATTGGGCAGACGTCCAAGTCCACCACCTGAGGACTGGAAGCCATTGGACAAGTGTTACTTTTGTCTCGATGGCAAGTTGTCGAACGACGAACAGCCTCCTCttAGTCCGCAAAGTGACAGCAGCAATAGCTCTCGATCAGCGGAGTCGCCCATGTCCGTACAAGTCGATCCCATGGCGGCCTCAGTGGTGGCTGCAGCACTCAGTGGCACATATCCGACTTTATTGCCACAATGGTGTCTACCACCAAGAGAACCACCACATGTCGTGGCTGCACAAGCCGCGGCACAACATCAGCATCAAGAAAATGCTGGTGCCGATCAGCCGCTCGATCTATCGGCGAAACCCAAAAATTCTCAGGACAACAACATATCCATGTTGGAACAACAAAAGATACCTCTGCGAATGTCGGCAGCCATCGATCCAAAAACTATTTTCAaCACATGCTATCGAGCAAAGCCGCGGGTAACGGGTGGAGTTACGGCATCAGGTGTACCAGTTGTAACAAGTGGTGGTGGTCGTCGTACGTATACCGAAGATGAATTGCAAGCAGCATTACGTGATATACAAAGTGGAAAATTGGGTACAAGACGTGCAGCTGTATTATACGGAATACCAAGGAGTACATTACGTAACAAGGTCTACAAATTAGCAATGGAACGTCAGAGGGACGCGTCACCCTCGGCTAATTTGAATGCTGCTAATACAACAACATCAACAACatcaacaacagcaacaacacaacataataataatagtgaAGTGGCTGGAGCGAATGTGGTGGCAGTAAATAGCAATGCTGGCATTGCCGTTAGGGCAGCACAAGCAGCGGCAgcggcagcagcagcagcagcggcGGCGGCAGCAGCTCAAGATGTTGTTTTATCTACCGCCACCATCGCTACAACTACAACAGCTACGACAACTATTATAACAACACCAAAAACAACAAGCCACCGACAACAACATAATGCCTCCGCTACGCAAGTGGATGAGGTGGACGATAAAGAGCTGTCGGGTGCTGAGGAAGAGAAAGAAGTTGAGAAAGCATTACTTCAACCATTACTTTCATTCGAGGATCTCGTACGTTTTTCAAATCTCGAAGGTACTGGTGGTGAATCACTTAGGGCATTGTTACAACGTGGCCAAGAGACTGGTGCCACTGAATGGTCAGCTTTTGAGCACGCCAACATTGGAccttatatacaaaaaatgttGGCTGCTGCTGCACCTTTTAAAGGTATGGAGACGCAAGATTACAGAATCCCAGAGGTCATGCGCCGACTGATGTGCGAGGACAAAAAGCTTACCAAGGAAGCTAACGTCAACGGTGACCAAATACAGCACCTTCATCATGCTTCGTTGCAGCATCGTCTCCCTCAGTCGCAGTCAGGTCAAAGAGCGCCAATGACAAATGACGATTTCAATCCAACAATCGAAGAGGAGGCGAGTGATAGTGGTCAAGGTCGGCCCATCCTTAAGATTCCGTCCTATAAGCCAGCGAGTAGCGCGACTCCAAATAAAAATGGTCCAGAACAACAGCAAAGTTCTGCCACAGCATTTGCACAGAGTTTTGCAGCTGCAGCCGCCGCGGCAGCAAACGCAGTCGCAGGTAGTCCAGCTCTTCTTGAACGTGCCAGCCCAGCATTTTCGGGTACGAGTTCACCTACAAATTCACTTGTCGGTAAGGGAATGGCTGTCAACTTCCGTGACGTTATAGCCAAGAGTATCAGCGTTAAGTTCCAGGAAGGACAGACGCCCACTGGTATTCCagGTCAAGGAACTCCAACAGGTCAGTCAATGGTTACCGAACCAAATCCATATAAGCGGGGTCGTTTTACACCGCCACAACAACAGAGCCAATCGGTAAGCCATTCGCAAGCACAATCGCAGCAAGCCAAAGCTGCTGCGGCAGCAAAGGAACAACAAAAACAAGCGAGCGCAGGCGGTAAAGGTACAAGGCCAAAACGTGGCAAATATCGTAATTACGATCGAGATAGTCTCGTCGAGGCAGTACGTGCCGTACAGCGAGGCGAAATGAGCGTACATAGAGCCGGTAGCTATTATGGCGTTCCACATTCCACACTCGAGTACAAAGTTAAGGAAAGGCATCTTATGAGGCCAAGAAAAAGGGATCAAAAGCAGCCAGATGACAAGGCAAAAGAAATGACAGCGGCAAGTTCAACGTTACGTACAGCACCGTCAACGACGCCAGAGAAGAAGCCGTTGCTCAAACCCCAAAAACCATTTGCTCCTGCCGGCGGTACTGGTGCTACCGGAGCCGGTATGCCAGGACCAAATGGTTTAAAAATGCCACCATTTATAGACGGAATGCCTCATCTGCCATTTACCCATCCCTTTAATTTTTGGGGTCCCACGCCCTTCATGCCCACACCTTTCATTCCCGGGGGACCTAATGTCCCAGCCATGCTACCGGAACAGTACTTTGCCTCGCAGCGTATGCGCGGCCTCCAAGAACAGCAACGCAATCCAGCCGTCGttcagcagcagcaacagcagcgcGACGGTGCGTCAGCTGAACAACCAgGTACATCGAATGCCCGAGGTACTTCGCTGATAAAATCACCACGTGAGATGGCTGAGAGTTTGTACGACGGTACAGCGGCCAATGGTAGTTTTCTCGATAATCTGATAAGGTCGAGCCTCGAGTCAGGCATACCACGAGAACGTGCCATTGTCGAAGCCCGTAGTAATGCAGCTGCTCAGTCGCAATcgcagcaacaacagcaacagcagcatCCAGAAAATTTAGGAAGTAGTAAAGTTCTGATAGATCAGTTATGCAGAAACTCGAGGCGTACGCCATTGCCAAGAGCTATGCAACAAGATAGTAGCGAAGACGAAGCACCAACGAATTATAGAACTACGTCAACGCCACAGCAACAAAGATCGGCACCTGAAAGGCCGGAGCGTGTGCCCACCGTCGATTTAAGCCCTTCGCCTTCGGAACGCGCACGAGCAACGGACGAAGGTAGCGATCGAGGTTTAGCCTCGCCACCTACACCGCTCTCACTCTCGAGGCTTAGTGGATCCGGCAGGGAGGACGAGACCACTAGAGACTCGAGGAGTAGCCGGGAGCGTGagGTACACAATGGCGGCGGCAGCGAGATGCCAGATGATCGCCCAGTCGATACCACAAACAAGAAGCTAAACCACTACCCGGACATACACAACCTCTACGCCGTGTCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCAACACAAGGATATAGCGGCCGCGGCGACCGCTGCTGGCGGTATAGTAGTACAATTGCAACGTAACTACACAACGACTACCGGCAACGGACGCCCAGCTACACCGAATAATAATCAGTCGTcacaacagcaacaacagcaaTCATCATCATCGTCTGTCCAGGATCAGGAAGCTTCATTAAGCCCACAACCAATGACaacgacgacaacgacgacgacgacatCAATGGAAGAAACGGTAGAGCAgtag
Protein Sequence
MGRRRWKQYQDTLYSGTRSSTDNNTTTPTNQHQQQLQLQLQQLAQVQQAKPADSPSQQLKASLANHHQQQRVAANCTTVVVTGGESPRRADESAATGVTENGRILLLTTTEGARENGTINTNENGPLRGHCENDRTTLDEEEEEDSSLAAKTTITTTTAKTIVKNELTNEEEIAQRIKRERLDERIRLSPLREDEKTIERPNKTNDTEGTKEVKEEIGSEPRVQITQGLLRVKKEEELQETPGPGGGLNCPRPTSTPLNNNNNNNNGPTVGEIRSASTPPKKEVVFCVPSYVLGRRPSPPPEDWKPLDKCYFCLDGKLSNDEQPPLSPQSDSSNSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREPPHVVAAQAAAQHQHQENAGADQPLDLSAKPKNSQDNNISMLEQQKIPLRMSAAIDPKTIFNTCYRAKPRVTGGVTASGVPVVTSGGGRRTYTEDELQAALRDIQSGKLGTRRAAVLYGIPRSTLRNKVYKLAMERQRDASPSANLNAANTTTSTTSTTATTQHNNNSEVAGANVVAVNSNAGIAVRAAQAAAAAAAAAAAAAAAQDVVLSTATIATTTTATTTIITTPKTTSHRQQHNASATQVDEVDDKELSGAEEEKEVEKALLQPLLSFEDLVRFSNLEGTGGESLRALLQRGQETGATEWSAFEHANIGPYIQKMLAAAAPFKGMETQDYRIPEVMRRLMCEDKKLTKEANVNGDQIQHLHHASLQHRLPQSQSGQRAPMTNDDFNPTIEEEASDSGQGRPILKIPSYKPASSATPNKNGPEQQQSSATAFAQSFAAAAAAAANAVAGSPALLERASPAFSGTSSPTNSLVGKGMAVNFRDVIAKSISVKFQEGQTPTGIPGQGTPTGQSMVTEPNPYKRGRFTPPQQQSQSVSHSQAQSQQAKAAAAAKEQQKQASAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKAKEMTAASSTLRTAPSTTPEKKPLLKPQKPFAPAGGTGATGAGMPGPNGLKMPPFIDGMPHLPFTHPFNFWGPTPFMPTPFIPGGPNVPAMLPEQYFASQRMRGLQEQQRNPAVVQQQQQQRDGASAEQPGTSNARGTSLIKSPREMAESLYDGTAANGSFLDNLIRSSLESGIPRERAIVEARSNAAAQSQSQQQQQQQHPENLGSSKVLIDQLCRNSRRTPLPRAMQQDSSEDEAPTNYRTTSTPQQQRSAPERPERVPTVDLSPSPSERARATDEGSDRGLASPPTPLSLSRLSGSGREDETTRDSRSSREREVHNGGGSEMPDDRPVDTTNKKLNHYPDIHNLYAVSTDKKSACDSKLIVDHSSQKTQQHKDIAAAATAAGGIVVQLQRNYTTTTGNGRPATPNNNQSSQQQQQQSSSSSVQDQEASLSPQPMTTTTTTTTTSMEETVEQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-