Basic Information

Gene Symbol
kn
Assembly
GCA_017163975.1
Location
JAFFSR010000229.1:14129843-14137369[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.9e-111 3.4e-106 358.5 11.5 205 564 1 373 1 384 0.80

Sequence Information

Coding Sequence
ATGAGGCGTTTCCAGgtTGTCATTAATACGCAAGTTACCGTTGAAGGTCCACTATTAGCAATGTCCGACAATATGTTCGTACACAACAATAGTAAACACGGCCGCCGAGCGAAACGACTAGATCCAAGTGATCCTGGCGAGTACAACAGTCTTTATCCACCCCTGCAAATGGCAGCACCCTCTATAAAGGCGATATCACCAGCCGAGGGTTGGACATCGGGAGGGTCGACAGTGATAATAATTGGCGATAACTTCTTTGACGGACTTCAAGTTGTCTTTGGCACTGTGATAGTTTGGAGCGAGCTGATAACACCACACGCAATCAAAGTACAAACACCAGCGCGACAGATACCGGGTGCCGTTGAAGTTATGTTGTCTTACAAGGGTAAACAATTTTGCAAAGGAGGATCCATGCGATTTACTTATTTTTCACTGAGTGAACCGCCGCTCTCCTACGCCTTCGAGAGGTTACAAAAGCTGGTACCTCGACATCCAGGTGACCCAGACAAATTATCCaaagaacaaattttaaaaagagcTGCGGATTTAGCAGAAGCGTTATACAGTATGCAGCGAACATCGAACGCAACGGGTTTATCGTTATCGGCTCCGAGAAGCCCCGGTTCGAGTCACGCAGCGCAACCTCCCACATCGAGTTCCGCAGCAACCGCCTTTAATTCTTATACAGGTCAACTAGCTGTCACTGTTCAGGAGAACGGTTCTTCATCAAAATGGACAGACGATGGAGCTAGTGTGACGACAAGTGCTGGAAGTGGGACCAACGGTAGTAACAACGGTGCCAATGGTAGCAACAACGGTGGTGCTAATAGCGCTGGAAGTAACGCTGGTAGCGCAAGTGCTAGTGCCGACGCTTACCGACAGAGCAGTAGCGCTAGTCCTCGAGGAGTTGTTTCAAGCGGTGGTGGTTACTGTGGTAGTTCTGCAAGCACACCCCATAGTCATAGCACCAGTGGTAGCTACTCTGTCGCTAATCCTTACACTGGCAGTCCAACTTTGTACACCTCCCCGCACGAACAGTACGGAATTTTCTATTCGTCCGGGGACAGCAGTGCTTTCGCCCCTGTAGTCCGACCACCGACCACCTCAGTCCCACCGCACTGGTCCACACAGCACCACCTCGCTACGGCAGCccagtaa
Protein Sequence
MRRFQVVINTQVTVEGPLLAMSDNMFVHNNSKHGRRAKRLDPSDPGEYNSLYPPLQMAAPSIKAISPAEGWTSGGSTVIIIGDNFFDGLQVVFGTVIVWSELITPHAIKVQTPARQIPGAVEVMLSYKGKQFCKGGSMRFTYFSLSEPPLSYAFERLQKLVPRHPGDPDKLSKEQILKRAADLAEALYSMQRTSNATGLSLSAPRSPGSSHAAQPPTSSSAATAFNSYTGQLAVTVQENGSSSKWTDDGASVTTSAGSGTNGSNNGANGSNNGGANSAGSNAGSASASADAYRQSSSASPRGVVSSGGGYCGSSASTPHSHSTSGSYSVANPYTGSPTLYTSPHEQYGIFYSSGDSSAFAPVVRPPTTSVPPHWSTQHHLATAAQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00692695;
90% Identity
iTF_00079548;
80% Identity
iTF_00079548;