Basic Information

Gene Symbol
osa
Assembly
GCA_017163975.1
Location
JAFFSR010000216.1:867529-877461[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-10 1.6e-06 31.0 0.1 47 89 17 56 11 56 0.91

Sequence Information

Coding Sequence
ATGTCTTCTACAAGTATACAATTGGCTTCATACGCAGAGCACAGAACAAAagaaGTcacaaaaaacaaaacatgGAAAGATATAGCTGGACTTCTTGGCATCGGAGCAAGTAGTAGTGCTGCTTATACTTTACGTAAACATTATACAAAGCATTTATTAGCTTATGAATGTCATTTTGATCGCGGTGGAGTAGATCCCCAACCAATTATAAATCAGGTAGAGGCTGGTTCAAAGAAAAAAGGGTCCAAAGGAACATCGTCTGTACCCTCTCCAGgaGTTTATGGCTCATGGGTTTACGGCTTATAg
Protein Sequence
MSSTSIQLASYAEHRTKEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLAYECHFDRGGVDPQPIINQVEAGSKKKGSKGTSSVPSPGVYGSWVYGL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01110712;
90% Identity
-
80% Identity
-