Basic Information

Gene Symbol
KDM5A
Assembly
GCA_017163975.1
Location
JAFFSR010000220.1:14604024-14617072[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.6e-25 4.8e-21 77.5 0.0 2 89 118 201 117 201 0.94
2 2 3.7 3.8e+04 -2.3 0.0 50 65 1078 1093 1073 1103 0.76

Sequence Information

Coding Sequence
ATGGTCTCAAAAGTACAACACGGAGGGAATAATAGATACCAAACTGGTGGCATACTGTTTACTGATACTCTGGGAGCAAGTAGACGTGCTACAGAGAATTCGGTAATGGGACAACGTGAAGATTTTGAATTTCAGGTGCCACCCGAGGCTCCTGTATTCGAGCCAACGACCGAAGAATTTCTCGATCCACTTGGTTACATTGCTAAAATACGGCCAATTGCTGAAAAATCGGGCATATGTAAAATCAAACCACCACCCaaCTGGCAACCACCATTTGCTGTTGATGtagataaattcaaatttacaCCAAGAATACAAAGGCTAAATGAGCTCGAAGCAAAGACTAGAATCAAACTAAATTTCTTAGATCAAATAGCAAAGTTTTGGGAACTTCAAGGATCTTCATTGAAAATTCCATTAGTTGAACGTAAAGCATTAGATCTATATTCACTCCACAGGATTGTAACTGATGAAGGTGGAATTGAACATGTAACAAAAGAAAGAAGGTGGGCCAAGATAGCAAATAAATTGGGCTATCCTTCTGGGCGCAGTGTTGGCAGTATTCTTAAAAGTCATtatgaaagaattttatatCCATTTGACGTTTTTAAACAAGGAAAAACTTTAACTGATATTAAAATTGAACCTGATGGCGATGCAAACGAAAAGAAGGACAGAGACTATAAACCACATGGAATCATTTCACGACAACAAATTAAACCACCACAGGAAAAATTTTCTCGTCGATCTAAGCGATTTTCTGGACAAGATGAGAAACAAAATGGTTGTCCGTCAACTATCAAACAAGAAGATTGTAAAGAAGAATTTGATGTGGATACAAAGGATAACATCAAAAAATTCGTTGAGACGAAAGTTGAGATCAAAAGCAAAGATTCTAAGGATaacataaaaaCTAAATATTCACCAGACACTAAAGATTGTGTAAAAACGAGAGGTGCAGCTGAAAAGGATAAAGAAAACAGTAAggaattgaaaaaattacaattcTATGGACCTGGTCCTAAAATGGCTGGATTTAATACCAAAGAACCAAAAGAgaagaaatcaaataaaacgAGAGGGGTCAAACTAGTCTATGAATTTGATCCACTTGCGAAGTACATCTGTCATAATTGTGGCAAAGGAGATAACGAGGAAAATATGTTACTTTGTGATGGATGCGATGATAGTTATCATACATTTTGTTTGTTACCACCATTATCAGAAATTCCAAAAGGAGATTGGAGATGTCCTAAATGTGTTGCTGAAGAAGTTTCAAAACCAATGGAAGCTTTTGGATTTGAACAAGCACAAAGAGAATATACACTGCAACAATTTGGAGAAATGGCAGATCAATTCAAAAGTGATTATTTCAACATGCCTGTGCatATGGTCCCAACTGAGCTTGTAGAAAAAGAATTCTGGAGAATAGTATCATCAATTGATGAAGATGTTACAGTTGAATATGGAGCTGATTTACATACAATGGACCATGGATCAGGTTTTCCAACAAAAACAAGTGTTAATCTTTTTACTTGCGATCAAGAATATGCAGAGTCTTCCTGGAACTTGAATAATTTACCAGTATTGCGCGGAAGTGTTCTCGGTCATATTAATGCAGATATTAGTGGAATGAAAGTTCCATGGATGTATGTAGGAATGTGTTTTGCAACATTTTGTTGGCATAATGAAGATCACTGGAGctattctattaattatttacattggGGTGAACCAAAAACTTGGTATGGTGTACCTGGTGCTGAGGCTGAAAAATTCGAAAAGTCTATGAAATCAGCTGCACCAGAGCTTTTTCACAGTCAACCAGATTTGCTTCATCAGTTAGTTACCATTATGAACCCCAATATTCTTACACACGAAGGAGTACCAGTATTTAGAACAGATCAGCATGCTGGAGAATTTGTGGTTACTTTCCCCAGAGCTTATCATGCTGGTTTCAACCAAGGATATAATTTTGCTGAAGCTGTGAACTTTGCGCCAGCTGATTGGTTGCAAATCGGTAGAGAATGTATCGCGCATTATTCAAATTTGAGACGATTTTGCGTATTTTCGCATGATGAATTGGTTTGCAAAATGTCTTTGGAACCAGAAACTTTGGATATTGGTATAGCTGCTGCCACATATCACGATATGCTAACAATGGTTGAGGAAGAAAAACGTCTCAGAAAGAATCTGTTGGAATGGGGTGTGACCGAAGCAGAACGTGAAGCATTTGAACTATTACCAGATGATGAAAGGCAGTGCGAGGCGTGTAAGACTACGTGTTTCTTGAGTGCAGTGACCTGTTCGTGTCACAAATCACAATTAGTCTGTTTAAGACATTATACCGACCTGTGCGATTGTCCACCGGAAAAACATACTTTAAGATATAGATATACCTTAGACGAACTTCCAATCATgttgcaaaaattaaaacttaaagcCGAGTCATTTGATTCATGGGCAAGTAAGGTTAAGGAAGCTATGGATCCAAAAGGTGAAAAGATCGAGTTGAATGAATTGAAAGAATTATTAGATGAAGCTGAAACTAAAAAGTTTCCAGAGAGCGAATTACTTACTGCTTTAACAACAGCTGTTCAAGATGCTGAAAAATGTGCCAGTGTTGCAAGgcagttattaaataataaacaaagaacAAGgACAAGACAGTCTGTAGATGCAAAATACAAACTTACCGTTGAAGAACTAACCTTATTTCACCAAGAAATTACCAATCTTTGTTGTGAACTTAAAGAAGCAGATGGTGTTAAATTTATTCTAGATCAAGTTTTACAATTCCAAAAAGATGCAGAAGAATTAGAAGCTCAAGAAATGGATTGTGAcattaaaaaacttgaaaaatgcATAGAGTATGGTGACTCAATTTGTATAGAATTACCACAACTTTCAAGATTAAAAAagaaattACAACAATTACGTTGGTTAGATGAGGTTAAGTCAATTCAAGAAGATGATAAAGCTGTGACGAGACTTGATTTAACAAAACTTATTGAAGAAGGAATGAATGTTCCACCTCATTCATCTGTTGAAAATGCATTAGCTCAACTTCAAGTTCTTATGATCAGTATTGACAATTGGGAAGATAAAGCTAAATTATATCTTCAAGCATCTAAAAATAGACAAACAATAGCATCTGTTGAAGAACTTATAAAAGAAGCTGACAATATTGATGCACACTTACCAGGATTAAGTAGTCTCAAAGATGTTTTGAATAAAGCTAAAAATTGGACGAAAATTGTTGAAGAAATACAAGCTAGAGAAAATTTTCCTTATTATGATACATTGGATGAATTAGTTCGTAAAGGCAGAACTATGCCGATCCATCTTCCAGCTTTGCCAGTTCTTGAATCAACTTTATCTGCTGCAAAACAGTGGAAAGAGAGAACAGCAAGAACATTCCTTAGAAAAAATTCACATTATACACTAATGGAAGTATTATCACCCAGGGTTGGTGTTGGATTGCAATCAATGAAAGCacgtaaaaataacaaaggagAAGATTCTATTGGTGCTGTATATGTTTGTGATACAAAATTGGATGATTCAAATGATTCAGCAACAGTTGTTGCTGCTTTCAAACTTGCAGAACAGCGTGAAATGGAAGCTATGAGAAACTTAAGAGAAAGAAATGTTGTTAAAATGCAAGCCGAAGAATCAAGCTTTTGCGTTTGTCGTCGAGAGAAATTTGGTCAAATGTTACGTTGCGAGTTATGTAAAGATTGGTTTCACAcaAATTGTGTTCCGGTTCCAAGAACTCCATATAAGGGTAAACAACAAAATTCACGagtcaataaatttttgtgtccgTGTTGTTTACGATCGCGTAGACCGCGTTTAGAAACAATCTTAGCATTATTAGTGAGTCttcaaaaaatttctgttcGTCTCCCAGAAGGTGAAGCATTACAGTGTCTTACAGAACGTGCAATGAATTGGCAGgacaGAGCAAGGCAAGCTTTAAATACTGAAGAAGTATCCTTGGTATTGGCAAAACTTAGCAATTTATCACAGAAACTAACAGAAGCAGCTAACAgagaaaaaactgaaaaaattatcagtACTGAATTAAAGAAAGCAGCAAATAATCCAGAACTTCATCAGCGAGTTCAAGCTATAGCTTCAATGAGTGGTGTACATTCTGATGATAGTGTTATAAGTATTCCGgatGATGACGAGAAatatgatgacgatgacgatgataaCCTTATTGATAGTGATGACGATGTTCTAACTATTGATATGGATGAACCAAGTAGTAGTGCATTTAATAGTAACGAACATGCATATTCAACAGcatCAAAGTTTTCTTCGAAATCTCCTGGTGGCGATGAAAAAATAACGTTATCTAATGTTACAACCACACGTTTAGAAGATTTAATGATGGAAGGAGACCTTTTGGAAGTTGCTTTAGATGAAACTGAAAACATTTGGCGGATTCTTAGTCAAACATGTACAACATCTCAAAGTATACGCAAATATGCACCATTAGACCAACCTTTGCCTGTTCCTGAATTGAAAGAGGTGAAGAAAGTACCTACACCAAGAGGACGTAAGCGAAAATCTGATGAACTCGAAGCAATGAAGAAACTCGGACGTCAAAAAGTAGACGAAAAGCCAGTTGTAAAACGCAAAGGattaaacaaagaaacgaaACCAAACACGACGCCAGGACCAATGAAGCGTGGACCACGCAAGatGAAACGAAAAGATAGCGACGAAACACCCAAAAGAAGAACAGGAAATCGAAAGAAAACTAAACAAGACACATCTGATGAGGAAGAAGACTGCGCCGCCCTCAACTGTTTAAGACCTAATGGACGCGAGGTAGACTGGGTACAATGTGATGGAGGATGCAATGGATGGTTCCATATGCACTGTGTGGGTTTGGATAAAACAGAACTCGCTGAGGAAGATGATTACATTTGCAGTAATTGCAGTGAGGCGGATATAAACTCATCGAGTCATCAGGATTATCATTCGTCGCCATCGTCGCACGTCGAACTCACCGATGATGAAGATGAGTTGGAAGACATACAAGAGACAGTCAGCATTATTAGGATCTATTAA
Protein Sequence
MVSKVQHGGNNRYQTGGILFTDTLGASRRATENSVMGQREDFEFQVPPEAPVFEPTTEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIEHVTKERRWAKIANKLGYPSGRSVGSILKSHYERILYPFDVFKQGKTLTDIKIEPDGDANEKKDRDYKPHGIISRQQIKPPQEKFSRRSKRFSGQDEKQNGCPSTIKQEDCKEEFDVDTKDNIKKFVETKVEIKSKDSKDNIKTKYSPDTKDCVKTRGAAEKDKENSKELKKLQFYGPGPKMAGFNTKEPKEKKSNKTRGVKLVYEFDPLAKYICHNCGKGDNEENMLLCDGCDDSYHTFCLLPPLSEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTELVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGAEAEKFEKSMKSAAPELFHSQPDLLHQLVTIMNPNILTHEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLQIGRECIAHYSNLRRFCVFSHDELVCKMSLEPETLDIGIAAATYHDMLTMVEEEKRLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHKSQLVCLRHYTDLCDCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWASKVKEAMDPKGEKIELNELKELLDEAETKKFPESELLTALTTAVQDAEKCASVARQLLNNKQRTRTRQSVDAKYKLTVEELTLFHQEITNLCCELKEADGVKFILDQVLQFQKDAEELEAQEMDCDIKKLEKCIEYGDSICIELPQLSRLKKKLQQLRWLDEVKSIQEDDKAVTRLDLTKLIEEGMNVPPHSSVENALAQLQVLMISIDNWEDKAKLYLQASKNRQTIASVEELIKEADNIDAHLPGLSSLKDVLNKAKNWTKIVEEIQARENFPYYDTLDELVRKGRTMPIHLPALPVLESTLSAAKQWKERTARTFLRKNSHYTLMEVLSPRVGVGLQSMKARKNNKGEDSIGAVYVCDTKLDDSNDSATVVAAFKLAEQREMEAMRNLRERNVVKMQAEESSFCVCRREKFGQMLRCELCKDWFHTNCVPVPRTPYKGKQQNSRVNKFLCPCCLRSRRPRLETILALLVSLQKISVRLPEGEALQCLTERAMNWQDRARQALNTEEVSLVLAKLSNLSQKLTEAANREKTEKIISTELKKAANNPELHQRVQAIASMSGVHSDDSVISIPDDDEKYDDDDDDNLIDSDDDVLTIDMDEPSSSAFNSNEHAYSTASKFSSKSPGGDEKITLSNVTTTRLEDLMMEGDLLEVALDETENIWRILSQTCTTSQSIRKYAPLDQPLPVPELKEVKKVPTPRGRKRKSDELEAMKKLGRQKVDEKPVVKRKGLNKETKPNTTPGPMKRGPRKMKRKDSDETPKRRTGNRKKTKQDTSDEEEDCAALNCLRPNGREVDWVQCDGGCNGWFHMHCVGLDKTELAEEDDYICSNCSEADINSSSHQDYHSSPSSHVELTDDEDELEDIQETVSIIRIY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309292;
90% Identity
-
80% Identity
-