Basic Information

Gene Symbol
Atf6
Assembly
GCA_017163975.1
Location
JAFFSR010000227.1:12732139-12735529[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.7e-17 2.7e-13 52.3 13.6 2 62 364 424 363 426 0.94
2 2 3.8 1.8e+04 -1.6 2.1 3 13 583 593 581 594 0.86

Sequence Information

Coding Sequence
atgtatatcaaCAACATTCCATTGAGGGACGAGGGTGCCTTGCCGGCTGATGATTTTCTCGAAGCACTGAGCTCCGGTTTGGAAATACCGATGCTGCTGACTGGTGAAGGCTCACCTAGTTATGACGAGAGTCCTGATGAAATTATGAAAACAGCTTTTGAGACACAAACGCtcgaaaatattgattttgagTACGAGAAAAACGATGAATTTTCTGATATATTCTCAATCGGCAAAAATCCATTAAATAGTGAAAAACAGGAGTCGAAAAATTCATGCGTTCAACTGCCTCCTTCGCCAAGTCCTAGTCAATCAGAATCGTCGTCTAGTGGTTCTGAATGGCAGAGTGATGGTGTTGTACAAAGTGAAGGAAAGtttgCACTGGAAACTCCACCGATTTCCCCGCCGCAAAACGAGTCGCCACCAACGTCACCTCAGCCAACACAAAATAATCCGTCCCTAATATCGCAAGTTAAATTATTACCCTTTAATTCTGCCAATTTAAAGGAAGGCACAACgcgaaaaattatattatccgATAATCCAGCAAAACGTATTTGTATTCAaccaaaattcgaaaaaataacAACGACAAAAGATGCGCCTCGAAAGACAATAGTCCTGAGTGCTCAAGATTTTGCCGCGCTCACCCAAAGGGTAAAACAAAACAGTACGAACCAACCACTGAAAGTGCAAGCTTTACCGATAAGCAAACacgtaaaaattcaaaatcaattgAATTTATTACCAATGCAGCAAGCAAAAACATCAACAAACACAACGACTCTTACGCAAAATAATCAGCTGAAAATTGTCAATGCGGTGCCTAGCCTGCAAAGTCATTCCAAAACTCCGGTTATTACTATACCAAGTAATTCAATGGTAAAAACGGAGTCCAAATCATCATCACCTATCATCGTAAAAAGTGAAAATCCTCTAACCTGTCCAtctattgttattaaaaatgacGTGCCCGTGTGTCCGCCTATTGTTATTaagaaagaaaatcaaaactgcACGCCAATTTTCATAAAGAATGAATTTCCAGAATTCATTGATATTCAAGATAGGCAGGACAGTGAAATGAAAGCTTTAAAAAGGCAACAGAGAATGATTAAGAATAGAGAATCTGCTTGTCtttcaaggaaaaaaaagaaagaatatgtTACATCCTTGGAGAATCAAATAACCGAATTGACAGAGCAAAATAATCGATTACAAGCAgAAAACGCTGAATTGAAGCAAAGGTTAGCGCAATTCGAGGGAtctaatgagaaaaaatttggGAGTCGAAATTTaggagtaaataaaaaaaataccgcTATATTATTTGCCATGATATTCATGGTCTCACTTAATGTTGGCGGTTTAGGaggCTTATTGAATCATAACCGGCGACCCTTAAATGATATTGAATCCCCCGTACCGGCAATGTCAGTTCCAAATGTGAGGATTGGTAGGTCATTGTTGTGGTCTGAAACAGAGGAACAAGAAGATTCTTCATCGAAAGAAGATTTAAATGATACTTTACCTATACATCATCCTATGTGCCCCATGCACATCAATCGAACGGAGTCTATAAGACTTGATTCTGAATTAAGGCGATGGATTGGCGGTGAGCAAGATCGTGAAAATTGGACCAAACCTTCAAAAACTGATCTCGAAGTCAAATCTCTGAACCAACTGCTGCATTTACGTAACTATCCCTCGAAAGATGAATTAACAGCGAATAATGTAAGATTGTCTAGGCGAACAATGAGGCGAAAAATCAAAAACAATCAAGTAAACGATGTACCATCAACTTCGAATATTAATGCTGTTCAAGTTTTTTCGCCATTGCTGAAAGAGCATGCTAAACTTTTTGATGCACTGGGACGAAGAGATGATACTTTTTATGTCGTTTGGTTTACTGGAGATCATCTTTTACTACCAGCATCTAGAAAAAACAGTACGACTAGACCAAAAATGTCCCTCGTACTCCCTGCTGTTCCGGTAAATGGATCCTATTATTCAACGCCACCAAATCACGTAACAATGATGCAAATTGATTGCGAAGTAACAAATACACAGCTGCTTCATCTTCAAGAATCCATAATACCAAAAAATCTAAGGAATCAACGTCCGTCTGAAAGAAATACTTCAAAATATCGAAGTACCGGGATGTCACAGAATCCATCAAACATTACAAAAAGTTACAAgccttattttttaaaagaaaacagcACAAATTCTttgcataataataattttaaacgacCGTATACTGCCGATAAGAAAAGTCTTTATgacgaaaaaattaaagattttgaccttgattatataaaatacaattctTTAGAAGATAAAGAGCAGAAAAAATTGGACGTTTTCACAAATGATACAGAAACGAAAAAAATCACTTATCCGCAAGAGAAACGAATATTTAGAAGAAAAGTAAAACGTTCTACTGGGCAAtag
Protein Sequence
MYINNIPLRDEGALPADDFLEALSSGLEIPMLLTGEGSPSYDESPDEIMKTAFETQTLENIDFEYEKNDEFSDIFSIGKNPLNSEKQESKNSCVQLPPSPSPSQSESSSSGSEWQSDGVVQSEGKFALETPPISPPQNESPPTSPQPTQNNPSLISQVKLLPFNSANLKEGTTRKIILSDNPAKRICIQPKFEKITTTKDAPRKTIVLSAQDFAALTQRVKQNSTNQPLKVQALPISKHVKIQNQLNLLPMQQAKTSTNTTTLTQNNQLKIVNAVPSLQSHSKTPVITIPSNSMVKTESKSSSPIIVKSENPLTCPSIVIKNDVPVCPPIVIKKENQNCTPIFIKNEFPEFIDIQDRQDSEMKALKRQQRMIKNRESACLSRKKKKEYVTSLENQITELTEQNNRLQAENAELKQRLAQFEGSNEKKFGSRNLGVNKKNTAILFAMIFMVSLNVGGLGGLLNHNRRPLNDIESPVPAMSVPNVRIGRSLLWSETEEQEDSSSKEDLNDTLPIHHPMCPMHINRTESIRLDSELRRWIGGEQDRENWTKPSKTDLEVKSLNQLLHLRNYPSKDELTANNVRLSRRTMRRKIKNNQVNDVPSTSNINAVQVFSPLLKEHAKLFDALGRRDDTFYVVWFTGDHLLLPASRKNSTTRPKMSLVLPAVPVNGSYYSTPPNHVTMMQIDCEVTNTQLLHLQESIIPKNLRNQRPSERNTSKYRSTGMSQNPSNITKSYKPYFLKENSTNSLHNNNFKRPYTADKKSLYDEKIKDFDLDYIKYNSLEDKEQKKLDVFTNDTETKKITYPQEKRIFRRKVKRSTGQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-