Basic Information

Gene Symbol
gata5-a
Assembly
GCA_949128115.1
Location
OX421964.1:28695574-28756620[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.62 4.5e+03 -1.4 0.2 23 29 10 16 9 21 0.89
2 3 5e-18 3.6e-14 53.3 2.7 1 34 372 404 372 406 0.97
3 3 5.4e-18 3.9e-14 53.2 5.0 1 34 426 458 426 460 0.98

Sequence Information

Coding Sequence
ATGAACCCGCCTACACTGAATGGCGGATGCGCCGCGTGCAATCTGCACCGCATCCGCCAAAAGTTGACGCGAGCTCCGAGCGCCAAGGCGCCGGCGCCGTTTCAAGTCGGCACCGCGCGTGACGTCCGTTACGAGGAGCCGGCCCAGTACAGTCCCGCCTCGCAGGGTAACGAGGGGGCAGAGCTTTCGCCCCACTCGAGGGCGACGACGCCCCAGCAACTGGAGTGTCTCACGACAGCGGCGCAGGCACAGCAACAGTACGCGATGCCCAtagccgacgagccagaatatCTCATCTTCAGAGAAGAGGTAATAAAACTCATCGCGAACACTCTTAGCGGTCGGGACGACGAAATACCAAACAATGAAGCTATTACCGCGTGGCAGGATCAAATCGATGGAAATGGAGGCACGACGCAGTACCTCCAGCTGGACCCCATACACACGGTCCAGTCAAATGGGTCGCCCCATGGCAGCGCCAATTCGAGCTCAGGTTCCCCTAGGAGGGTCGCTTTCACTCATCTGAACTCAATACAGCAGAGTCAGCAACAAAATTCGGACCAGCACCATCAACAGCATCACCAGCACCACTTGACACAAGAGGGCACCCATTTGACTCCCCTCACTAGTCACATCAGCTATACCGGAGACATAGAGGGTTCGTCGGGAGTGAACATTGTTGCTAGCGCTTTGTACTCGAGAAACTCAGGGAACTACACGCCAACTGCGATGCCGTACTACGGAAATGGATCGCCGGAACTGGCGACGCAATCTTCACAAATTTGGTCAAACTCAGGGGTGAACTCAGCCGGAGGCCTGGCTCTCACCGAAGACTATCCCAAAGTGTCATCTTCGTCCTCTGGGGGTGGCCCGGCTCTGCCGGCTTTCAACAGGCTATCCAACACGTACGCCAACAGCCACCCGCACAGAAGCGCCGCACCCTACACCGTCCCCAATTCCTACGGGGACTGGCAGTATTCCGCAGAACCGGCCAACTCCCTCCAGTACAACCTGCTGAGCCCAGGAGGCGCCAGGAATCGCCAGCTGCCGGCTTCAGCGTCGCTTTCTGCGATTGACCCTCGCACAGCCGAATATTTTACCGAGGGACGAGAGTGCGTGAACTGTGGGGCCATCGATACGCCATTGTGGAGAAGAGACGGCACTGGCCATTACCTCTGCAATGCCTGCGGACTTTACCATAAGATGAACGGCATGAACCGGCCCTTAGTCAAGCAGCCTCGTAGATTGTCTGCTTCGCGTCGTGTCGGCTTGACCTGCACCAACTGCCACACCAGTACCACTTCGCTCTGGCGAAGGAATACCCTCGGAGAACCCGTCTGCAATGCTTGCGGCTTGTACTTCAAGCTTCACGGAATCAACAGGCCTCTGGCCATGAAGAAAGATAGCATTCAGACAAGAAAACGAAAACCGAAAGGTAGCAAAGACAATAGCGGTAACAGGATTAGTAACGCTTTGGAATCTACACTGAACACCATAAAGCTGGAGCCGAGCTTACCCTCAGTCAAAATGGAGCATAATGCTTTAGATAGCTACAGTGCGGTAGCCAGCCTCAACCACATGGGCCACGCCGCCCCCAGCTACTACAGCAACCAGTCAAACCACCGGCTGTCCCCTTACACATCACAGCAGACATCACAACTCTCCAACGCAGAAAACTACTACAACATCCTGCAGCAGTCGAGTCCCAGCCCCCCGTCGACGACGCCCCCCAGCCCAAACTCCCCCCACAtcgtcaacaacaacaacaacaccaaAGTCATAATGCACGGTGATCACAACATGGACAGGCCCACAGTTGTGTCTCTTTCGTCCTAA
Protein Sequence
MNPPTLNGGCAACNLHRIRQKLTRAPSAKAPAPFQVGTARDVRYEEPAQYSPASQGNEGAELSPHSRATTPQQLECLTTAAQAQQQYAMPIADEPEYLIFREEVIKLIANTLSGRDDEIPNNEAITAWQDQIDGNGGTTQYLQLDPIHTVQSNGSPHGSANSSSGSPRRVAFTHLNSIQQSQQQNSDQHHQQHHQHHLTQEGTHLTPLTSHISYTGDIEGSSGVNIVASALYSRNSGNYTPTAMPYYGNGSPELATQSSQIWSNSGVNSAGGLALTEDYPKVSSSSSGGGPALPAFNRLSNTYANSHPHRSAAPYTVPNSYGDWQYSAEPANSLQYNLLSPGGARNRQLPASASLSAIDPRTAEYFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLTCTNCHTSTTSLWRRNTLGEPVCNACGLYFKLHGINRPLAMKKDSIQTRKRKPKGSKDNSGNRISNALESTLNTIKLEPSLPSVKMEHNALDSYSAVASLNHMGHAAPSYYSNQSNHRLSPYTSQQTSQLSNAENYYNILQQSSPSPPSTTPPSPNSPHIVNNNNNTKVIMHGDHNMDRPTVVSLSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-