Basic Information

Insect: Anaspis maculata
Gene Symbol: pol
Assembly: GCA_949128115.1
Location: OX421964.1:81807867-81813985[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.8 1.5e+02 4.3 1.1 1 21 686 706 686 707 0.92

2 13 0.023 1.3 10.9 2.3 1 23 737 760 737 760 0.95

3 13 0.077 4.2 9.2 5.1 1 22 769 790 769 792 0.90

4 13 1.2 67 5.4 2.3 1 23 801 823 801 823 0.97

5 13 0.033 1.8 10.4 6.1 1 23 830 852 830 852 0.97

6 13 1.2e-05 0.00067 21.2 1.3 1 23 861 883 861 883 0.99

7 13 0.2 11 7.9 4.4 1 23 892 915 892 915 0.96

8 13 0.065 3.6 9.4 1.9 2 23 937 959 937 959 0.96

9 13 0.031 1.7 10.5 0.7 2 23 969 990 968 990 0.94

10 13 0.02 1.1 11.1 2.0 1 23 999 1022 999 1022 0.93

11 13 0.069 3.8 9.4 2.6 2 23 1031 1052 1030 1052 0.96

12 13 0.12 6.5 8.6 5.8 1 23 1061 1083 1061 1083 0.98

13 13 0.017 0.91 11.3 3.9 1 23 1092 1115 1092 1115 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.8	1.5e+02	4.3	1.1	1	21	686	706	686	707	0.92
2	13	0.023	1.3	10.9	2.3	1	23	737	760	737	760	0.95
3	13	0.077	4.2	9.2	5.1	1	22	769	790	769	792	0.90
4	13	1.2	67	5.4	2.3	1	23	801	823	801	823	0.97
5	13	0.033	1.8	10.4	6.1	1	23	830	852	830	852	0.97
6	13	1.2e-05	0.00067	21.2	1.3	1	23	861	883	861	883	0.99
7	13	0.2	11	7.9	4.4	1	23	892	915	892	915	0.96
8	13	0.065	3.6	9.4	1.9	2	23	937	959	937	959	0.96
9	13	0.031	1.7	10.5	0.7	2	23	969	990	968	990	0.94
10	13	0.02	1.1	11.1	2.0	1	23	999	1022	999	1022	0.93
11	13	0.069	3.8	9.4	2.6	2	23	1031	1052	1030	1052	0.96
12	13	0.12	6.5	8.6	5.8	1	23	1061	1083	1061	1083	0.98
13	13	0.017	0.91	11.3	3.9	1	23	1092	1115	1092	1115	0.98

Sequence Information

Coding Sequence: ATGGCCCCGGAAGACATTCAAAAGACCGCATTTACGGTCGAAAACGGGCACTATGAGTACCTACGCATGCCCTTTGGGTTAAAGAACGCTCCGGCGACCTTCCAGCGCGTTGTAGAGAATATATTACGCGGGTTACAGAATGAGCTTTGTCTAGTCTATCTAGACGACATAATCATCTTCAGTGTGTCACTTCAGGACCATTTGGTTAACCTCAAACAAGTTTTTCAACGATTAGAACaagcgaatttcaaaattcaactggaCAAGTCCGAGTTCCTAAGAAAAGAAGTAAATTACTTGGGTCATGTTGTCACACCCAATGGCATTAAGCCCAATCCAGAAAAGGGTAGGgctattcaaaattttcccaTCCCAAAAACGCCAAAGCAGCTGAAAGGATTTCTAGGGCTCTTGGGCTACTATAGGAAGTTCATCAAAGACTTCTCGAAACTCACCAAGCCATTGactaaatgtttgaaaaaagatgCCACAATTACCCATAATGAAGAATTCTTGTCTTGTTTCGACACATGCAAAAAGGTATTGATGAACGAGCCCATCCTTCAGTATCCTGATTTTTCTAAAACGTTTAACCTGACCACCGATGCGAGCAACGTAGCCATTGGAGCCGTTTTGTCTCAAGGGCCCATTGGTAATGATCTGCCCTTGGCCTTTGCATCACGAACTCTCAATGATACGGAACAAAACTACTCCACGATCGAAAAGGAACTTCTGGCAATTGTGTATGCCGTGAAGTACTTTAGGCCCTATCTCTTTTGGCATCGCGACCACGAAAACGACATCCAGCAGGTACCTGAACCTGATGACCTATTACCAGAACCTGATGACCCATTACCAGAACCTGATGACCCATTACCAGAGCCTGAAAATGATGACGGTACTCAACATTCTAATGACCAAGAAAACCCTATTGTTGAAATTCCGATATCTGATGATATATTGAATAAAgCAACTAAACCTTTCGAGACGATACATATCGATACGATAACGATTGATAAGGGAATATTTCTCGACCTATATAAACTCTACCCGATTCCCATTTGGCGTGAATCTCAGTCCTTTCGATTAGTTTTACCCGATACCAGATATTTACTACTATCGGGGAGTCGTTTCGCCCACGAAACCGAGGACTGCCAAAAGATCAACGAAATCTTTTTCTGCAAAACTGCACTGATCGAGTTCTCCAAGAACAACTGCGAAGTCAACATCATCCGAAACCAAAAATTATCGGATTGCAACCGACACTCCATCGAAATTCAAGACCTCCAAATTCAAGAAATAGAGGACACCAAGTATTGGCTTCTTATTGCACCAAACTACGCCGACCTCAAAATTACCTGCCCTTCAAGACGAGAAATGCAACGTCTCCAGGGTACCTACTTGATACACATGCAACCACAGTGTATCATTTTTATCAACGACCAAAAACTAAGCCCATCAGTGGAAGAAGAACTAGGTCGACCCCTGTTCGTTGACTTCGAGGACATGGAAATTCAAGAATTCCAACACCCATCACAAAAGAAGACGCATATCAACCCTGTTAACTTGGAAAACATCTCCgagttgaaaaatgaagttaaatGGTTCCAGGCCCAAGCGATGCTTAAACGTTCATCCAATTCTGGTCATCACACCCACATCATCTATGCCATGATTGTCGTGATAGTCGTAATCATTTTCTTCAAGAACCCAGTTCTTCGATTTCTGAAGTCCTGCAGAACCATCAAAGAACAACCCCGGCAACCCTTACCATCACCAACGCCGCCACCACGAGTTGTTCAGCTTCCTCGTGCCTCCGAACCTGAATCTTCGAGGGGAGGAGTTACATCAATGCCACTGCcgccagggctgggcaaaatacttcgaaaaatGAAACACGAAAACATTCACGCGGCCGAACTGTTCCACgccattgtcgaaccggaacagtttTCTTGCAACTGCTGTGGCTACTGCAGCTTCTACCGGTTTGATATATACGAACATTATAAACAAGGGCATGATTTGAAGACTGAGAACAATGCGATTAGAAGATACACGTGCGTATATTGCGGAAACGAATCGAATTCTAGCTTGTCGTTTCTGAAGCATCACAAGTTGTGTGAAAAGATAACCGGTGATGGCACTATAGGAAAGATGATGCCACAAGAAAATCTAGATTTGCATCGGGTTATAAACATGCCGACGCATGAATGCAACCAGTGCTCGTTCAGAGCCAGGCAGAAGTCCGCTTTGAAAAGGCACTGGATATCGAAACATGCCGCCGatgaagaaattgattggttccATTGCACGTACTGTTCGTACCGAGTCAAGCACCAGTCGTATTTGAAGCAACACGTGGTATGGAAACACGCCACCAACGAAGAAATCGAGTGGTTCCACTGCGAGCTTtgctcgtaccgagccaaagGAAAATCGCGTTTGAAAGAGCACTTGCTGAACCACGCCACGGACGTcgaatggttccagtgcaagcACTGCTCGTACCGCGCCAAGCGAAAGAAGAATTTGAAAATGCATTCGCTCAGGCACGCCGCAAGCGAAGAAATATTCTGGTTCCAGTGTGACGTGTGTCCGTACCGAGGCAAACGCAAATCGAATCTGAAGAAGCATTTGCTGACGCACGCCGCGGATGaacaaatcaactggttccggtGCGACCGGTGTCTGTACCGCACCAAACAAAACTTTGACTTGAAACGGCACAAGCTGAAGTACCACACAAACGACTGGTTGCAAAACAAGCGAAAGTTGGACTTGGCGCAAAGAAGAAGAGAAGCCGCAAAGTGCAGCCGCTGTTCGTACCAAGCCAAGAACAAGTCGCTTTTGAAAAGACACGTGCTGTCCAATCACGCCACAGACGCAGAGATCGACTGGCTGCCGTGCGACCGTTGTTCGTACCGGGCCAAACGAAGATCGGATTTGAAAAAGCACGCGTTGCAACACGCCGCCGACGAAGACATCGCTTGGTTCCGGTGCAAGCGCTGCCCGTACCGGGCCAAACGCAGCGCTTACTTGAAGAGGCACGAGTTGCAGCGGCACGGCTCGGACGAAGTCGATTGTCTTCGGTGCGAGCACTGTTCGTTCAGGGCCACGCAAAAGTCGCTTTTCGCAAGGCACGTGCTGAAGCACGCCAAGGCggaagaaattgattggttccGGTGCGGTCACTGTTCGTACCGGGCCAAGCGAAGCTGCGATTTGAAGAGGCATGCGCTGAAACACGCCGCGGCCGAAGAGATCCGATGGTTCCAGTGCGACCGCTGTCCGTACCGATCCAAGCAAGGGGGACATCTGCAAAGGCACAAGAGAAGACGCCATGCTGACGGAGAAATCAATTAA
Protein Sequence: MAPEDIQKTAFTVENGHYEYLRMPFGLKNAPATFQRVVENILRGLQNELCLVYLDDIIIFSVSLQDHLVNLKQVFQRLEQANFKIQLDKSEFLRKEVNYLGHVVTPNGIKPNPEKGRAIQNFPIPKTPKQLKGFLGLLGYYRKFIKDFSKLTKPLTKCLKKDATITHNEEFLSCFDTCKKVLMNEPILQYPDFSKTFNLTTDASNVAIGAVLSQGPIGNDLPLAFASRTLNDTEQNYSTIEKELLAIVYAVKYFRPYLFWHRDHENDIQQVPEPDDLLPEPDDPLPEPDDPLPEPENDDGTQHSNDQENPIVEIPISDDILNKATKPFETIHIDTITIDKGIFLDLYKLYPIPIWRESQSFRLVLPDTRYLLLSGSRFAHETEDCQKINEIFFCKTALIEFSKNNCEVNIIRNQKLSDCNRHSIEIQDLQIQEIEDTKYWLLIAPNYADLKITCPSRREMQRLQGTYLIHMQPQCIIFINDQKLSPSVEEELGRPLFVDFEDMEIQEFQHPSQKKTHINPVNLENISELKNEVKWFQAQAMLKRSSNSGHHTHIIYAMIVVIVVIIFFKNPVLRFLKSCRTIKEQPRQPLPSPTPPPRVVQLPRASEPESSRGGVTSMPLPPGLGKILRKMKHENIHAAELFHAIVEPEQFSCNCCGYCSFYRFDIYEHYKQGHDLKTENNAIRRYTCVYCGNESNSSLSFLKHHKLCEKITGDGTIGKMMPQENLDLHRVINMPTHECNQCSFRARQKSALKRHWISKHAADEEIDWFHCTYCSYRVKHQSYLKQHVVWKHATNEEIEWFHCELCSYRAKGKSRLKEHLLNHATDVEWFQCKHCSYRAKRKKNLKMHSLRHAASEEIFWFQCDVCPYRGKRKSNLKKHLLTHAADEQINWFRCDRCLYRTKQNFDLKRHKLKYHTNDWLQNKRKLDLAQRRREAAKCSRCSYQAKNKSLLKRHVLSNHATDAEIDWLPCDRCSYRAKRRSDLKKHALQHAADEDIAWFRCKRCPYRAKRSAYLKRHELQRHGSDEVDCLRCEHCSFRATQKSLFARHVLKHAKAEEIDWFRCGHCSYRAKRSCDLKRHALKHAAAEEIRWFQCDRCPYRSKQGGHLQRHKRRRHADGEIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -