Amac023808.1
Basic Information
- Insect
- Anaspis maculata
- Gene Symbol
- -
- Assembly
- GCA_949128115.1
- Location
- OX421964.1:85342346-85345086[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.74 40 6.1 3.5 3 23 16 37 14 37 0.94 2 13 0.00053 0.029 16.0 3.5 2 23 47 68 46 68 0.97 3 13 0.15 8.4 8.3 3.9 1 23 77 99 77 99 0.98 4 13 0.0019 0.11 14.3 3.5 2 23 109 130 108 130 0.96 5 13 0.45 25 6.8 5.2 1 23 139 161 139 161 0.97 6 13 5.6e-05 0.0031 19.1 1.9 2 23 338 359 337 359 0.96 7 13 8.9 4.9e+02 2.7 5.5 3 23 370 390 368 390 0.90 8 13 9e-05 0.0049 18.5 3.1 1 23 399 421 399 421 0.98 9 13 0.00053 0.029 16.0 0.9 2 23 431 452 430 452 0.97 10 13 0.00052 0.029 16.0 1.2 1 23 461 483 461 483 0.99 11 13 0.00011 0.0059 18.2 0.6 2 23 493 514 492 514 0.97 12 13 0.0014 0.079 14.7 1.0 1 23 523 545 523 545 0.98 13 13 0.00051 0.028 16.1 4.8 1 23 554 576 554 576 0.97
Sequence Information
- Coding Sequence
- ATGATGGACGTGCATACTCCAAATGAAGAAGTCAACTGGAGTCATTGTCCCAAGTGTTCTTACCGCGCCAAACGGTCTAGCACCTTGAAGTTCCACATGCTATATAGACATGTCCCAGAAAAAGACATCAAGTGGATTCATTGTCCCGAATGTTCATTCCGTACCAAACGAAAAAACACCTTGAACAGGCACATGCTGACGCATGCTGCGgctgaagaaatcgactggttccatTGCACCCAATGTTCATATCGAGCCAAAGAAAAGAAACTTGTAACCAGGCACATGCTGACTCACGCCACCGTTGAACAGATCAACTGGTTGTGTTGCGGGAAATGTTCTTACCGAGCCAAACGCAAGGAAAATCTGAAACAGCACATGCTGACGCATGCTTCagttgaagaaatcaactggtttcattgCACTCAGTGTTCCTATCGGGCCAAAACAAAGAAGCATGTGAGCGATCACATGCTGATTCACGTTCCAGTTGAACAGATCCACTGGTTCGATTGCGTTTGGCCGTTTCAACTCGACGATCACCTCAGAAGGAATCACAAAAATGCATACGCACCTGGACTATTCCATACCATCGTGGAACCAGAACAGTACCTTTGCGTCACCTGCGGTTTCAAAAGCTACTTCAAAGTTGATCTATATGAACACTGCCTTAAGCAGCACGCGATAAGCATTAGCGACAGTAATGGTGAAACAGGCCAGTTCTGCGAAAAGTTTAAAAAGTCCTTTTGTGCTAACTGCATGTACAGAAGCCATTCAAGTTTACATCTCTGCAAACATCACCACTCGTGTGATGTGTCGCCAAAAACTCCAGGAGTAGATGCTATTCATCTTGTCACTATAAGCATCAAGTCTGAGTCTGGTGTAGAAGAAAGCAATTTGAATTCAGCAGACTCAGAGTTGACTGGTGATCATGCTCATGTCAATTTCGAATGTAATGTAAAAAACCAAGAGCTTATGCATCATGCTCCAGCGAAAGAAATAATCCAGTTATATTGCAACGAATGTTCTTACCGCACCAAACGAAAAGGGGActtgaagaggcacatgttaAGGCATGCCGTggctgaagaaatcaactggcacCATTGCATCACATGTTCTTATAAAACTAGAGAGAAGAGTCGTTTGAAAACCCACATGCTGGTACATGCCGCGGCCGAAGAAGTAAACTGGTTCTATTGCACCATTTGTCCACATCGAACCAAACTGAGCTCCAACTTGAAAAGACACATGCTGATGCATGCCGCGCCTGCAGAAATCAACTGGCTCCCCTGCGACCAGTGTCCCTACCGAGCCAAAAGTAAACCGCACCTGAAGAATcacatgctgacgcacgccGCAGCCgacgaaatcaactggttccgtTGCACCGAATGTTCGTACAGGACCAAGCAGAACGGACCGTTGAAGTTgcacatgctgacgcacgccGCGGATGAAGACATCGTCTGGATTCAGTGCCCCGAATGTCCCTACCGCACCAAACAGGAGAGGTACTTGAAGAACCACATGCTGAAGCACGCAGCGGCGGAAGAAATTAATTGGTTCCATTGCGCCGAATGTCCGTACAAATCTGCCGACAACGGCAGATTGAAAAGACACATGCTGACGCATGCCGCACCCGAACAGGTCGATTGGTTCTGTTGCACGGAATGTCCTTTCCGGACCAAACGAAAAACGAATCTGAAGAATCACATGGTGACGCACGCTGCGGACGAAGAAATCGAGTGGTTCCCTTGCTTGGTTCCTTGGTGCGCGTACAGAGCTAAAATCAAGCAGAGGCTGGCGAAGCACATGGTGACTCATCACGCGCCGGCTGTATCTGAAAACTTGAATTGA
- Protein Sequence
- MMDVHTPNEEVNWSHCPKCSYRAKRSSTLKFHMLYRHVPEKDIKWIHCPECSFRTKRKNTLNRHMLTHAAAEEIDWFHCTQCSYRAKEKKLVTRHMLTHATVEQINWLCCGKCSYRAKRKENLKQHMLTHASVEEINWFHCTQCSYRAKTKKHVSDHMLIHVPVEQIHWFDCVWPFQLDDHLRRNHKNAYAPGLFHTIVEPEQYLCVTCGFKSYFKVDLYEHCLKQHAISISDSNGETGQFCEKFKKSFCANCMYRSHSSLHLCKHHHSCDVSPKTPGVDAIHLVTISIKSESGVEESNLNSADSELTGDHAHVNFECNVKNQELMHHAPAKEIIQLYCNECSYRTKRKGDLKRHMLRHAVAEEINWHHCITCSYKTREKSRLKTHMLVHAAAEEVNWFYCTICPHRTKLSSNLKRHMLMHAAPAEINWLPCDQCPYRAKSKPHLKNHMLTHAAADEINWFRCTECSYRTKQNGPLKLHMLTHAADEDIVWIQCPECPYRTKQERYLKNHMLKHAAAEEINWFHCAECPYKSADNGRLKRHMLTHAAPEQVDWFCCTECPFRTKRKTNLKNHMVTHAADEEIEWFPCLVPWCAYRAKIKQRLAKHMVTHHAPAVSENLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -